mRNA_H-canaliculatus_F_contig14246.3337.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: D8LIM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM0_ECTSI) HSP 1 Score: 108 bits (271), Expect = 7.440e-26 Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 1
Query: 70 LRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 246
+RMAGLEVDKLYSLDRRHVLLKIRLPR KLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF
Sbjct: 1 MRMAGLEVDKLYSLDRRHVLLKIRLPRIKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 59
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: A0A1Z5KN45_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN45_FISSO) HSP 1 Score: 89.0 bits (219), Expect = 8.050e-19 Identity = 41/72 (56.94%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 16 PPEFFLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKD 231
P ++FLG+ SPGT IWSRLR AGLE ++Y+LDRR V++KIR P +L +VAEV+RLK++ RDG+ F++D
Sbjct: 870 PSDYFLGFRSPGTSIWSRLRQAGLETQRVYALDRRSVMIKIRCPNDRLMDVAEVLRLKLKTRDGSFAPFRED 941
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: A0A7S3QEB7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEB7_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.510e-18 Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 13 APP-EFFLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 246
APP +FFLG+ SPGTQIW RLR AGLE D++Y+LD R V++K+R P +L +VAEV+RLK++ DG F++D +F
Sbjct: 1172 APPSDFFLGFRSPGTQIWGRLRQAGLETDRIYALDTRRVMIKVRCPADRLMDVAEVLRLKMKTNDGYYATFREDMIEAF 1250
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: A0A7S1TPM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPM3_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.310e-17 Identity = 37/76 (48.68%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 19 PEFFLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 246
P FFLGWT+PGTQIW+RLRMAGL V +++ ++ + V+LKI +P+++LE+VAE M +K+ ++ G RF+ + F
Sbjct: 28 PNFFLGWTAPGTQIWARLRMAGLIVKRIFDINTQVVILKITIPQTRLEQVAEAMHVKILKKGGGWDRFRVAKKDDF 103
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: A0A7S4HJC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HJC6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.310e-17 Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 16 PPEFFLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 246
P ++FLG+ S GTQIWSRLR AGLE ++Y+LD R V++K+R P +L +VAEV+RLK++ RDGT F++ F
Sbjct: 593 PSDYFLGFKSSGTQIWSRLRQAGLETQRIYALDSRRVMIKVRCPADRLMDVAEVLRLKLKTRDGTYTAFRESIMHQF 669
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: K0TEN3_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEN3_THAOC) HSP 1 Score: 83.2 bits (204), Expect = 8.620e-17 Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 1 VMGGAPPEFFLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 246
V+ P ++FLG+ SPGTQIWSRLR AGLE ++Y+LD R V+LK+R P +LE+VAE ++LK++ + G F++D + F
Sbjct: 694 VIQAPPSDYFLGYGSPGTQIWSRLRSAGLETQRVYALDTRRVMLKVRCPVDRLEDVAEALKLKLKTKSGDYVPFREDLITEF 775
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: A0A7S2JXK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXK3_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.580e-16 Identity = 38/77 (49.35%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 16 PPEFFLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 246
P ++FLG++S GT+IW+RLR AGLE ++Y LDR+ V+L +R P +L++VAEV+RLK+R +DG F++ H F
Sbjct: 516 PSDYFLGFSSAGTKIWARLRQAGLETQRVYGLDRKRVMLLVRCPEDRLQDVAEVIRLKLRTKDGLFLPFRETHSHIF 592
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: A0A7S2EGT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGT0_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.190e-16 Identity = 38/77 (49.35%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 16 PPEFFLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 246
P ++FLG+ S GTQIWSRLR AGLE ++Y+LD++ V++K+R P +L +VAEV+RLK++ RDG F++ S +
Sbjct: 776 PSDYFLGFKSSGTQIWSRLRQAGLETTRIYALDKKRVMIKLRCPPERLMDVAEVLRLKLKTRDGVYAPFRESMISQY 852
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: B7G9W7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9W7_PHATC) HSP 1 Score: 80.9 bits (198), Expect = 5.590e-16 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 1 VMGGA---PPEFFLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 246
M GA P ++FLG+ S GT IWSRLR AGLE ++YSLD R VL+K+R P +L +VAEV++LK+R +G F++D F
Sbjct: 833 TMAGALPPPSDYFLGFKSAGTSIWSRLRQAGLETQRVYSLDPRRVLIKVRCPSDRLMDVAEVLKLKLRSSEGGFAPFREDMMDMF 917
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Match: A0A482RUE1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUE1_9ARCH) HSP 1 Score: 78.2 bits (191), Expect = 4.930e-15 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 10 GAPPEF----FLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF 246
GAPP FLGW S GTQIW+RL++AGL+V +YS D V+LK++ P +LE++AE MR+K++ R G + F+ R SF
Sbjct: 195 GAPPSLPIAQFLGWNSAGTQIWARLKLAGLDVKVVYSYDLYRVILKLKCPAWRLEQMAEQMRIKIKTRGGYMKPFRVSRRDSF 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14246.3337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14246.3337.1 >prot_H-canaliculatus_F_contig14246.3337.1 ID=prot_H-canaliculatus_F_contig14246.3337.1|Name=mRNA_H-canaliculatus_F_contig14246.3337.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=81bp MGGAPPEFFLGWTSPGTQIWSRLRMAGLEVDKLYSLDRRHVLLKIRLPRSback to top mRNA from alignment at H-canaliculatus_F_contig14246:1226..2000- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14246.3337.1 ID=mRNA_H-canaliculatus_F_contig14246.3337.1|Name=mRNA_H-canaliculatus_F_contig14246.3337.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=775bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14246:1226..2000- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14246:1226..2000- >mRNA_H-canaliculatus_F_contig14246.3337.1 ID=mRNA_H-canaliculatus_F_contig14246.3337.1|Name=mRNA_H-canaliculatus_F_contig14246.3337.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=486bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14246:1226..2000- (Hapterophycus canaliculatus Oshoro5f female)back to top |