prot_H-canaliculatus_F_contig142.3305.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig142.3305.1
Unique Nameprot_H-canaliculatus_F_contig142.3305.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length74
Homology
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: D8LB85_ECTSI (Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB85_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 2.670e-33
Identity = 62/73 (84.93%), Postives = 65/73 (89.04%), Query Frame = 0
Query:    1 MAFGMTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKGSGSANGAGGGKPIKKGK 73
            MAFGMTFF LFDIPVFWPILLIYFIVLM LTMKRQ+KHMIKHKYVPWNWGKA YKG G++NG GGGKP K  K
Sbjct:  117 MAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKG-GASNGTGGGKPFKNNK 188          
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: A0A7S3K339_9STRA (Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K339_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.160e-22
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    2 AFGMTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKGSGSANG 62
            AF MTFF  FDIPVFWPILL+Y+I L+ LTMKRQIKHMIKHKYVPW++GKAKY   G A G
Sbjct:  129 AFVMTFFSFFDIPVFWPILLLYWIALVFLTMKRQIKHMIKHKYVPWSYGKAKYAAPGGAGG 189          
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: A0A7S2BTD6_9STRA (Protein RER1 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BTD6_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.550e-21
Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    2 AFGMTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKGSGSA 60
            +F MTFF++F+IPVFWPILL+YFI L VLTMKRQIKHMIKHKYVPW  GK KYKG  +A
Sbjct:  147 SFFMTFFEMFNIPVFWPILLLYFIALFVLTMKRQIKHMIKHKYVPWTGGKKKYKGGPAA 205          
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: A0A835YJT4_9STRA (Lactonase, 7-bladed beta-propeller-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.800e-21
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0
Query:    2 AFGMTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKG 56
            A  MT F LFD+PVFWPILL+YF+VL  LTMKRQIKHMIKH+YVPWNWGKAKY+G
Sbjct:  164 ALVMTHFSLFDVPVFWPILLVYFVVLFFLTMKRQIKHMIKHRYVPWNWGKAKYRG 218          
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: A0A7S2W0T1_9STRA (Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0T1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.750e-20
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 MAFGMTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKGSGSA 60
            ++F MTFF++FDIPVFWPILL+YF  L   TMKRQI HMIKHKYVPW WGK +Y G  +A
Sbjct:  124 LSFFMTFFQIFDIPVFWPILLLYFFALFFFTMKRQIMHMIKHKYVPWTWGKRRYTGKSAA 183          
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: A0A2J6K8D4_LACSA (Protein RER1 n=3 Tax=Asteraceae TaxID=4210 RepID=A0A2J6K8D4_LACSA)

HSP 1 Score: 89.0 bits (219), Expect = 2.140e-20
Identity = 48/71 (67.61%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    2 AFGMTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKGSGSANGAGGGKPIKKG 72
            AF MTFF LFD+PVFWPILL Y+IVL  LTMKRQI HMIK+KYVP+  GK KY G  S  G+ GG PI +G
Sbjct:  127 AFLMTFFSLFDVPVFWPILLCYWIVLFALTMKRQIMHMIKYKYVPFTTGKQKYGGRKSPGGSAGGSPIHRG 197          
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: A0A0G4H715_VITBC (Protein RER1 n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H715_VITBC)

HSP 1 Score: 88.2 bits (217), Expect = 3.270e-20
Identity = 39/53 (73.58%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    5 MTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKGS 57
            MTFF++FD+PVFWPILL+YF+VL VLTMK+QI+HMIK++YVPW+WGKA+Y  S
Sbjct:  124 MTFFRMFDLPVFWPILLMYFLVLFVLTMKQQIRHMIKYRYVPWSWGKARYASS 176          
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: A0A0L0FAM3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FAM3_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 3.690e-20
Identity = 38/54 (70.37%), Postives = 48/54 (88.89%), Query Frame = 0
Query:    6 TFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKGSGS 59
            +FFK+FD+PVFWPIL++YF++L  +TMKRQIKHM+KHKY+PWN GK KY G GS
Sbjct:   60 SFFKVFDVPVFWPILVLYFLILFTVTMKRQIKHMVKHKYLPWNVGKKKYGGMGS 113          
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: A0A2G5EJC7_AQUCA (Protein RER1 n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5EJC7_AQUCA)

HSP 1 Score: 87.0 bits (214), Expect = 1.130e-19
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    2 AFGMTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKGSGSANGA 63
            AFGMTFF +FD+PVFWPILL Y+IVL VLTMKRQI HMIK+KYVP+N GK +Y G  SA G+
Sbjct:  127 AFGMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMIKYKYVPFNIGKQRYAGKKSAVGS 188          
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Match: A0A7S2V805_9STRA (Protein RER1 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V805_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.290e-19
Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    5 MTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWGKAKYKGSGSANGAGGG 66
            MTFF +FD+PVFWPILL+YF VL  +TMKRQI HM KHKYVP +WGKAKYK +G   GA GG
Sbjct:  150 MTFFSIFDVPVFWPILLLYFFVLFFMTMKRQIIHMYKHKYVPISWGKAKYKDAGVEQGAFGG 211          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig142.3305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB85_ECTSI2.670e-3384.93Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S3K339_9STRA5.160e-2275.41Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=4... [more]
A0A7S2BTD6_9STRA2.550e-2176.27Protein RER1 n=1 Tax=Florenciella parvula TaxID=23... [more]
A0A835YJT4_9STRA2.800e-2180.00Lactonase, 7-bladed beta-propeller-domain-containi... [more]
A0A7S2W0T1_9STRA1.750e-2068.33Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=... [more]
A0A2J6K8D4_LACSA2.140e-2067.61Protein RER1 n=3 Tax=Asteraceae TaxID=4210 RepID=A... [more]
A0A0G4H715_VITBC3.270e-2073.58Protein RER1 n=1 Tax=Vitrella brassicaformis (stra... [more]
A0A0L0FAM3_9EUKA3.690e-2070.37Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A2G5EJC7_AQUCA1.130e-1972.58Protein RER1 n=2 Tax=Aquilegia coerulea TaxID=2188... [more]
A0A7S2V805_9STRA1.290e-1970.97Protein RER1 n=1 Tax=Amphiprora paludosa TaxID=265... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 2..55
e-value: 3.2E-25
score: 88.8
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 2..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..32
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig142contigH-canaliculatus_F_contig142:22774..23523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig142.3305.1mRNA_H-canaliculatus_F_contig142.3305.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig142 20669..24890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig142.3305.1 ID=prot_H-canaliculatus_F_contig142.3305.1|Name=mRNA_H-canaliculatus_F_contig142.3305.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=74bp
MAFGMTFFKLFDIPVFWPILLIYFIVLMVLTMKRQIKHMIKHKYVPWNWG
KAKYKGSGSANGAGGGKPIKKGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1