mRNA_H-canaliculatus_F_contig14149.3268.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: A0A6H5KUG3_9PHAE (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUG3_9PHAE) HSP 1 Score: 361 bits (926), Expect = 1.170e-125 Identity = 172/183 (93.99%), Postives = 176/183 (96.17%), Query Frame = 1
Query: 1 GIQEWWEREGKSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEFSNRGKGDALIKRVIAVGGDNVQIKDGSLFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVGAIET 549
GIQEWWER+GKSD+KIY TSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLS+KLSRPYQRKDVVVFYPPPKF EFS+RGK DALIKRVIAVGGD VQIKDGSLFVNGQEQFEDYTFEEPEY WGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWR G IET
Sbjct: 29 GIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDVVQIKDGSLFVNGQEQFEDYTFEEPEYSWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRAGTIET 211
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: D8LS42_ECTSI (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS42_ECTSI) HSP 1 Score: 361 bits (927), Expect = 1.070e-124 Identity = 172/183 (93.99%), Postives = 176/183 (96.17%), Query Frame = 1
Query: 1 GIQEWWEREGKSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEFSNRGKGDALIKRVIAVGGDNVQIKDGSLFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVGAIET 549
GIQEWWER+GKSD+KIY TSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLS+KLSRPYQRKDVVVFYPPPKF EFS+RGK DALIKRVIAVGGD VQIKDGSLFVNGQEQFEDYTFEEPEY WGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWR G IET
Sbjct: 102 GIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDAVQIKDGSLFVNGQEQFEDYTFEEPEYSWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRAGTIET 284
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: A0A6T5N089_HETAK (Mitochondrial inner membrane protease subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N089_HETAK) HSP 1 Score: 261 bits (668), Expect = 1.700e-85 Identity = 126/185 (68.11%), Postives = 154/185 (83.24%), Query Frame = 1
Query: 1 GIQEWWE-REGKSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEFSNRGKGDALIKRVIAVGGDNVQIKDGS-LFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVGAIET 549
G+ W + EGK D++IY TSLA+ALV+R+ +EPR+IPSLSM+PTF+IGDQLAVDKLS K++RPYQR+DVVVF PP FS FS+R +G+ALIKRV+AV GD V+IKDG LF+NG++Q E YT E+ Y WGPQTVP+G V+VLGDNRNHSLD H+WGFLPTEN+IGRA+FKYWPPWR G I
Sbjct: 88 GLINWAQSEEGKEDLRIYGTSLAVALVLRTFVVEPRWIPSLSMYPTFDIGDQLAVDKLS-KVARPYQRRDVVVFTPPDAFSIFSDR-RGEALIKRVVAVAGDVVEIKDGGHLFINGEKQEEKYTNEDALYEWGPQTVPKGCVLVLGDNRNHSLDGHVWGFLPTENIIGRAVFKYWPPWRAGGIAV 270
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: A0A7S2S8J5_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8J5_9STRA) HSP 1 Score: 238 bits (606), Expect = 3.710e-76 Identity = 118/184 (64.13%), Postives = 143/184 (77.72%), Query Frame = 1
Query: 7 QEWWEREG-KSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEFSNRG-KGDALIKRVIAVGGDNVQIKDG-SLFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVGAIET 549
Q WW E +++VK Y SL LAL+ R+ +EPRFIPSLSMFPTF++GDQLAVDK+S K+ RPY+R DVVVF PP F + G K +ALIKRV+AV GD V++KDG +L+VNG Q E +T E+ Y WGP+ VP GM+MVLGDNRNHSLDSH+WGFLP ENVIGRA+FKYWP WR+G IET
Sbjct: 79 QRWWADEDLRAEVKSYTVSLGLALLFRAFIVEPRFIPSLSMFPTFDVGDQLAVDKIS-KVVRPYERNDVVVFTPPQAFFDVMGSGTKKEALIKRVVAVAGDVVEMKDGGTLYVNGVPQPEGFTNEKAFYDWGPREVPAGMLMVLGDNRNHSLDSHVWGFLPKENVIGRAVFKYWPVWRLGLIET 261
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: A0A836CAW9_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW9_9STRA) HSP 1 Score: 231 bits (589), Expect = 3.270e-75 Identity = 105/151 (69.54%), Postives = 124/151 (82.12%), Query Frame = 1
Query: 94 LEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEFSNRGKGDALIKRVIAVGGDNVQIKDGSLFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVGAIE 546
+EPR+IPSLSMFPTFE+GDQLAV+K++ + RPY R DVVVFYPP FS FS RG +ALIKR++AV GD VQI+ G +++NGQ Q E + ++PEY WGP VP G VMVLGDNRNHSLDSHIWGFLP ENVIGRA+FKYWPPWR GA+E
Sbjct: 1 MEPRYIPSLSMFPTFEVGDQLAVEKVT-RYYRPYSRHDVVVFYPPEAFSLFSARGTDEALIKRIVAVEGDTVQIRGGKVYLNGQAQDEPFVTDKPEYEWGPMVVPAGKVMVLGDNRNHSLDSHIWGFLPRENVIGRAVFKYWPPWRAGAVE 150
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: B8BZJ0_THAPS (Mitochondrial inner membrane protease subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ0_THAPS) HSP 1 Score: 229 bits (585), Expect = 3.980e-74 Identity = 110/181 (60.77%), Postives = 139/181 (76.80%), Query Frame = 1
Query: 10 EWWER-EGKSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEF---SNRGKGDALIKRVIAVGGDNVQIKDGSLFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVGA 540
EW+ EGK DVK Y SL +AL++R + +EPR+IPSLSMFPTFE+GDQLAV+K++ ++ RP+ R +VVVF+PP KF E ++R +ALIKR++A GD V++ G LFVNG EQ E +T E+ EY +GP VP G V+VLGDNRNHSLD HIWGFLPTENVIGRA+F YWPPWR G+
Sbjct: 1 EWFASDEGKEDVKTYTVSLGVALLLRLLIIEPRYIPSLSMFPTFEVGDQLAVEKVTKRI-RPFSRNEVVVFHPPMKFREIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGVEQEEPFTAEDAEYDFGPVVVPPGNVLVLGDNRNHSLDGHIWGFLPTENVIGRAVFVYWPPWRCGS 180
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: K0S0N9_THAOC (Mitochondrial inner membrane protease subunit n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0N9_THAOC) HSP 1 Score: 229 bits (585), Expect = 1.060e-72 Identity = 108/182 (59.34%), Postives = 139/182 (76.37%), Query Frame = 1
Query: 4 IQEWW-EREGKSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEF---SNRGKGDALIKRVIAVGGDNVQIKDGSLFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVG 537
+QEW+ EGK DV+ Y TSL +AL++R + +EPR+IPSLSM+PTFE+GDQLAV+K++ ++ RP R +VVVF PP F E ++R +ALIKR++A GD V++ G LFVNG+EQ E +T E+ +Y +GP VP G V+VLGDNRNHSLD HIWGFLP ENVIGRA+F YWPPWRVG
Sbjct: 101 VQEWFASEEGKEDVRTYTTSLGIALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRI-RPLNRNEVVVFNPPTSFKEIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGKEQDEPFTAEDAQYEFGPVLVPAGEVLVLGDNRNHSLDGHIWGFLPAENVIGRAVFVYWPPWRVG 281
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: A0A6V1AJW1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V1AJW1_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.060e-72 Identity = 112/183 (61.20%), Postives = 142/183 (77.60%), Query Frame = 1
Query: 4 IQEWWER-EGKSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEF---SNRGKGDALIKRVIAVGGDNVQIK-DGSLFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVG 537
IQEW+ EGK DVK Y SL++AL++R + +EPR+IPSLSM+PTFE+GDQLAV+K++ ++ RP+ R +VVVF PP +F E S+R +ALIKR++AV GD V++K G LFVNG +Q E +T E+ EY +GP VP G V+VLGDNRNHSLD HIWGFLP ENVIGRA+F YWPPWRVG
Sbjct: 100 IQEWFASDEGKEDVKTYTVSLSVALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRI-RPFNRNEVVVFNPPERFRELVGESSRKSKEALIKRIVAVEGDTVEVKMGGKLFVNGVQQDEPFTAEDAEYEFGPVIVPPGDVLVLGDNRNHSLDGHIWGFLPAENVIGRAVFVYWPPWRVG 281
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: A0A7R9WYP6_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WYP6_9STRA) HSP 1 Score: 229 bits (583), Expect = 4.180e-72 Identity = 110/187 (58.82%), Postives = 139/187 (74.33%), Query Frame = 1
Query: 1 GIQEWWER-EGKSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEFSNRGKG-------DALIKRVIAVGGDNVQIKDGSLFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVG 537
GIQ W + EGK D+K Y TSLALAL++R +EPRFIPSLSM+PTF++GDQLAV+K++ ++ +P R++VVVF PP F E G +ALIKR++A+ GD V++K G L++NG Q E YT E+ EY +GP VPEG V+VLGDNRNHSLD HIWGFLP ENVIGRA+F YWPPWR+G
Sbjct: 118 GIQRWLKSDEGKEDIKTYFTSLALALLLRFTIIEPRFIPSLSMYPTFDVGDQLAVEKVTKRI-KPLYRREVVVFNPPATFREVIVNDYGQDPKRAKEALIKRIVAIEGDQVEVKKGKLYINGDLQNEPYTAEDAEYEFGPVVVPEGAVLVLGDNRNHSLDGHIWGFLPQENVIGRAVFVYWPPWRLG 303
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Match: A0A7J7IBZ0_9RHOD (Mitochondrial inner membrane protease subunit n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IBZ0_9RHOD) HSP 1 Score: 226 bits (577), Expect = 4.930e-72 Identity = 111/200 (55.50%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 7 QEWWER----EGKSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSNKLSRPYQRKDVVVFYPPPKFSEFSNR----------------GKGDALIKRVIAVGGDNVQIKDGSLFVNGQEQFEDYTFEEPEYRWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRVGAIE 546
+ WW R E SDV+++ S A A+++R +EPR+IPSLSMFPTFEIGDQL VDK + KL R +R DVVVFYPPP E S G DA+IKRV+AV GD V ++DG L+VNG+ Q E Y E+P+YRWGP VPEG ++VLGDNR++SLDSHIWGFLP NVIGRA+F+YWP R+G IE
Sbjct: 46 RRWWHRLLYDEQFSDVRVFTASFAAAVLLRVFVIEPRYIPSLSMFPTFEIGDQLFVDKATQKLGRHIERGDVVVFYPPPALIEASKMTAQALNAAGEKDVHQYGAKDAMIKRVVAVAGDTVAVRDGRLYVNGEAQIEPYVTEQPDYRWGPVQVPEGCLVVLGDNRSNSLDSHIWGFLPERNVIGRAVFRYWPITRMGLIE 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14149.3268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14149.3268.1 >prot_H-canaliculatus_F_contig14149.3268.1 ID=prot_H-canaliculatus_F_contig14149.3268.1|Name=mRNA_H-canaliculatus_F_contig14149.3268.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=184bp GIQEWWEREGKSDVKIYATSLALALVVRSVALEPRFIPSLSMFPTFEIGDback to top mRNA from alignment at H-canaliculatus_F_contig14149:771..2675- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14149.3268.1 ID=mRNA_H-canaliculatus_F_contig14149.3268.1|Name=mRNA_H-canaliculatus_F_contig14149.3268.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1905bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14149:771..2675- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14149:771..2675- >mRNA_H-canaliculatus_F_contig14149.3268.1 ID=mRNA_H-canaliculatus_F_contig14149.3268.1|Name=mRNA_H-canaliculatus_F_contig14149.3268.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1104bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14149:771..2675- (Hapterophycus canaliculatus Oshoro5f female)back to top |