mRNA_H-canaliculatus_F_contig14008.3189.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.630e-75 Identity = 130/135 (96.30%), Postives = 131/135 (97.04%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKVVL+YLDSV SVDT RSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV
Sbjct: 178 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVNSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 312
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA) HSP 1 Score: 227 bits (578), Expect = 5.960e-67 Identity = 119/135 (88.15%), Postives = 124/135 (91.85%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVFILDSLAKY PVD EAEGIIERVTPRLQHANSAVVMSAVKV+LSYLD +T+ DT R FSRKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EIKVFFCKYNDPIYVKMEKLE IIRLV+DRNI+QV
Sbjct: 228 QVFILDSLAKYDPVDGVEAEGIIERVTPRLQHANSAVVMSAVKVILSYLDLITNKDTERVFSRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPKILEHEIKVFFCKYNDPIYVKMEKLEIIIRLVSDRNIEQV 362
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S2H873_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H873_9STRA) HSP 1 Score: 214 bits (546), Expect = 9.140e-66 Identity = 110/139 (79.14%), Postives = 125/139 (89.93%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLD----SVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVFILDSLAKYTP D+REAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ S + D +R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EI+VFFCKYNDPIYVKMEKLE II+LV+++NID+V
Sbjct: 230 QVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGSSGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDKV 368
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S2WFD7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD7_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.480e-65 Identity = 115/135 (85.19%), Postives = 124/135 (91.85%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVFILD+LAKYTP + +EAEGIIERVTPRLQHANSAVVMSAVK+VLSY+D +TS DTVR SRKLAPPLVTLLNSE E Q+VALRNINLIVQKRP ILE EIKVFFCKYNDPIYVKMEKLE IIRLVN+RNI+QV
Sbjct: 230 QVFILDALAKYTPANGQEAEGIIERVTPRLQHANSAVVMSAVKIVLSYMDLITSEDTVRQLSRKLAPPLVTLLNSEAEIQFVALRNINLIVQKRPQILEHEIKVFFCKYNDPIYVKMEKLEIIIRLVNERNIEQV 364
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A6A5AWY7_9STRA (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AWY7_9STRA) HSP 1 Score: 218 bits (554), Expect = 5.510e-65 Identity = 108/135 (80.00%), Postives = 123/135 (91.11%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVF+LD+LA Y P DSREAEGIIERVTPRLQHANSAVV+SAVKV++ +L+ VT+ DT R+ SRK+APPLVTLL++EPE QYVALRNINLIVQKRP IL SEIKVFFCKYNDPIYVKMEKLE IIRLV++RN+DQV
Sbjct: 278 QVFVLDALANYVPADSREAEGIIERVTPRLQHANSAVVLSAVKVIMKFLEKVTNADTERTLSRKMAPPLVTLLSTEPEIQYVALRNINLIVQKRPSILSSEIKVFFCKYNDPIYVKMEKLEIIIRLVSERNVDQV 412
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S1VQ66_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQ66_9STRA) HSP 1 Score: 219 bits (559), Expect = 2.030e-64 Identity = 110/135 (81.48%), Postives = 124/135 (91.85%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVFILDSLAKYTP D REAEGIIERVTPRLQHAN+AVVMSAVKV+L+Y+D++ + D +R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+L ++NIDQV
Sbjct: 229 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANAAVVMSAVKVILNYMDALQNSDAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKVFFCKYNDPIYVKMEKLEIIIKLCAEKNIDQV 363
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S3PZD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD9_9STRA) HSP 1 Score: 219 bits (559), Expect = 2.570e-64 Identity = 113/137 (82.48%), Postives = 128/137 (93.43%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVFILDSLAKYTP D+REAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ + ++ DT+R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+LV+++NIDQV
Sbjct: 231 QVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGNSNSDTIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPTILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDQV 367
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S1FVF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVF1_9STRA) HSP 1 Score: 218 bits (556), Expect = 4.850e-64 Identity = 112/135 (82.96%), Postives = 124/135 (91.85%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVFILDSLAKY P D +EAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ V + DT+R+ +RKLAPPLVTLLNSE E QYVALRNINLIVQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+LV++RNIDQV
Sbjct: 216 QVFILDSLAKYAPRDGQEAEGIIERVTPRLQHANSAVVMSAVKVILSYMELVANQDTIRNLTRKLAPPLVTLLNSEAEIQYVALRNINLIVQKRPHILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSERNIDQV 350
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A6U3VDL9_9STRA (AP complex subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VDL9_9STRA) HSP 1 Score: 216 bits (549), Expect = 5.730e-64 Identity = 110/137 (80.29%), Postives = 125/137 (91.24%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVFILDSLAKYTP D+REAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ + + D +R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EI+VFFCKYNDPIYVKMEKLE II+LV++RNID+V
Sbjct: 229 QVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRVFFCKYNDPIYVKMEKLEIIIKLVSERNIDKV 365
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A1Z5K9X8_FISSO (AP-1 complex subunit beta-1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9X8_FISSO) HSP 1 Score: 218 bits (555), Expect = 6.470e-64 Identity = 113/137 (82.48%), Postives = 125/137 (91.24%), Query Frame = 1
Query: 1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSV--DTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 405
QVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ + S D +R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+LV+++NIDQV
Sbjct: 204 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSQNSDAIRALTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDQV 340 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14008.3189.1 >prot_H-canaliculatus_F_contig14008.3189.1 ID=prot_H-canaliculatus_F_contig14008.3189.1|Name=mRNA_H-canaliculatus_F_contig14008.3189.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=136bp QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDback to top mRNA from alignment at H-canaliculatus_F_contig14008:115..1664+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14008.3189.1 ID=mRNA_H-canaliculatus_F_contig14008.3189.1|Name=mRNA_H-canaliculatus_F_contig14008.3189.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1550bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14008:115..1664+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14008:115..1664+ >mRNA_H-canaliculatus_F_contig14008.3189.1 ID=mRNA_H-canaliculatus_F_contig14008.3189.1|Name=mRNA_H-canaliculatus_F_contig14008.3189.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=816bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14008:115..1664+ (Hapterophycus canaliculatus Oshoro5f female)back to top |