prot_H-canaliculatus_F_contig14008.3189.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig14008.3189.1
Unique Name	prot_H-canaliculatus_F_contig14008.3189.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	136

Homology

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 1.630e-75
Identity = 130/135 (96.30%), Postives = 131/135 (97.04%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKVVL+YLDSV SVDT RSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV
Sbjct:  178 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVNSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 312

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA)

HSP 1 Score: 227 bits (578), Expect = 5.960e-67
Identity = 119/135 (88.15%), Postives = 124/135 (91.85%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVFILDSLAKY PVD  EAEGIIERVTPRLQHANSAVVMSAVKV+LSYLD +T+ DT R FSRKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EIKVFFCKYNDPIYVKMEKLE IIRLV+DRNI+QV
Sbjct:  228 QVFILDSLAKYDPVDGVEAEGIIERVTPRLQHANSAVVMSAVKVILSYLDLITNKDTERVFSRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPKILEHEIKVFFCKYNDPIYVKMEKLEIIIRLVSDRNIEQV 362

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S2H873_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H873_9STRA)

HSP 1 Score: 214 bits (546), Expect = 9.140e-66
Identity = 110/139 (79.14%), Postives = 125/139 (89.93%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLD----SVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVFILDSLAKYTP D+REAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++    S  + D +R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EI+VFFCKYNDPIYVKMEKLE II+LV+++NID+V
Sbjct:  230 QVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGSSGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDKV 368

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S2WFD7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD7_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.480e-65
Identity = 115/135 (85.19%), Postives = 124/135 (91.85%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVFILD+LAKYTP + +EAEGIIERVTPRLQHANSAVVMSAVK+VLSY+D +TS DTVR  SRKLAPPLVTLLNSE E Q+VALRNINLIVQKRP ILE EIKVFFCKYNDPIYVKMEKLE IIRLVN+RNI+QV
Sbjct:  230 QVFILDALAKYTPANGQEAEGIIERVTPRLQHANSAVVMSAVKIVLSYMDLITSEDTVRQLSRKLAPPLVTLLNSEAEIQFVALRNINLIVQKRPQILEHEIKVFFCKYNDPIYVKMEKLEIIIRLVNERNIEQV 364

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A6A5AWY7_9STRA (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AWY7_9STRA)

HSP 1 Score: 218 bits (554), Expect = 5.510e-65
Identity = 108/135 (80.00%), Postives = 123/135 (91.11%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVF+LD+LA Y P DSREAEGIIERVTPRLQHANSAVV+SAVKV++ +L+ VT+ DT R+ SRK+APPLVTLL++EPE QYVALRNINLIVQKRP IL SEIKVFFCKYNDPIYVKMEKLE IIRLV++RN+DQV
Sbjct:  278 QVFVLDALANYVPADSREAEGIIERVTPRLQHANSAVVLSAVKVIMKFLEKVTNADTERTLSRKMAPPLVTLLSTEPEIQYVALRNINLIVQKRPSILSSEIKVFFCKYNDPIYVKMEKLEIIIRLVSERNVDQV 412

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S1VQ66_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQ66_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.030e-64
Identity = 110/135 (81.48%), Postives = 124/135 (91.85%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVFILDSLAKYTP D REAEGIIERVTPRLQHAN+AVVMSAVKV+L+Y+D++ + D +R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+L  ++NIDQV
Sbjct:  229 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANAAVVMSAVKVILNYMDALQNSDAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKVFFCKYNDPIYVKMEKLEIIIKLCAEKNIDQV 363

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S3PZD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD9_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.570e-64
Identity = 113/137 (82.48%), Postives = 128/137 (93.43%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVFILDSLAKYTP D+REAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ +  ++ DT+R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+LV+++NIDQV
Sbjct:  231 QVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGNSNSDTIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPTILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDQV 367

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A7S1FVF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVF1_9STRA)

HSP 1 Score: 218 bits (556), Expect = 4.850e-64
Identity = 112/135 (82.96%), Postives = 124/135 (91.85%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVFILDSLAKY P D +EAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ V + DT+R+ +RKLAPPLVTLLNSE E QYVALRNINLIVQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+LV++RNIDQV
Sbjct:  216 QVFILDSLAKYAPRDGQEAEGIIERVTPRLQHANSAVVMSAVKVILSYMELVANQDTIRNLTRKLAPPLVTLLNSEAEIQYVALRNINLIVQKRPHILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSERNIDQV 350

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A6U3VDL9_9STRA (AP complex subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VDL9_9STRA)

HSP 1 Score: 216 bits (549), Expect = 5.730e-64
Identity = 110/137 (80.29%), Postives = 125/137 (91.24%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVFILDSLAKYTP D+REAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ +   + D +R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE EI+VFFCKYNDPIYVKMEKLE II+LV++RNID+V
Sbjct:  229 QVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRVFFCKYNDPIYVKMEKLEIIIKLVSERNIDKV 365

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BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Match: A0A1Z5K9X8_FISSO (AP-1 complex subunit beta-1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9X8_FISSO)

HSP 1 Score: 218 bits (555), Expect = 6.470e-64
Identity = 113/137 (82.48%), Postives = 125/137 (91.24%), Query Frame = 0

Query:    1 QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTSV--DTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 135
            QVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ + S   D +R+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+LV+++NIDQV
Sbjct:  204 QVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSQNSDAIRALTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDQV 340

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig14008.3189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J742_9PHAE	1.630e-75	96.30	B2-adapt-app_C domain-containing protein n=2 Tax=E...	[more]
A0A836CH70_9STRA	5.960e-67	88.15	Coatomer protein complex, beta sub-unit n=1 Tax=Tr...	[more]
A0A7S2H873_9STRA	9.140e-66	79.14	Hypothetical protein (Fragment) n=1 Tax=Helicothec...	[more]
A0A7S2WFD7_9STRA	1.480e-65	85.19	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
A0A6A5AWY7_9STRA	5.510e-65	80.00	Adaptin_N domain-containing protein (Fragment) n=1...	[more]
A0A7S1VQ66_9STRA	2.030e-64	81.48	Hypothetical protein n=2 Tax=Grammatophora oceanic...	[more]
A0A7S3PZD9_9STRA	2.570e-64	82.48	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S1FVF1_9STRA	4.850e-64	82.96	Hypothetical protein (Fragment) n=1 Tax=Corethron ...	[more]
A0A6U3VDL9_9STRA	5.730e-64	80.29	AP complex subunit beta n=1 Tax=Ditylum brightwell...	[more]
A0A1Z5K9X8_FISSO	6.470e-64	82.48	AP-1 complex subunit beta-1 n=2 Tax=Fistulifera so...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 1..135 e-value: 8.2E-28 score: 97.2
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..135 e-value: 4.3E-48 score: 166.1
None	No IPR available	PANTHER	PTHR11134:SF30	BETA-ADAPTIN-LIKE PROTEIN B	coord: 1..135
IPR026739	AP complex subunit beta	PANTHER	PTHR11134	ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT	coord: 1..135
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..135

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig14008	contig	H-canaliculatus_F_contig14008:115..1664 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig14008.3189.1	mRNA_H-canaliculatus_F_contig14008.3189.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig14008 115..1664 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig14008.3189.1 ID=prot_H-canaliculatus_F_contig14008.3189.1|Name=mRNA_H-canaliculatus_F_contig14008.3189.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=136bp
QVFILDSLAKYTPVDSREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLD
SVTSVDTVRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILES
EIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR026739	AP_beta
IPR011989	ARM-like
IPR002553	Clathrin/coatomer_adapt-like_N