mRNA_H-canaliculatus_F_contig1393.3124.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: A0A6H5KDV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV2_9PHAE) HSP 1 Score: 486 bits (1251), Expect = 2.000e-168 Identity = 255/308 (82.79%), Postives = 278/308 (90.26%), Query Frame = 1
Query: 1 PTQSCLKAGLVAEE-RGTSPERSGGQRGEDQFERWAGQAGIKAPKLRHEVFADDLIGQLR--RAVEATSKSEQLVTVPAKAAISLTASESSPFRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAARCPEGAGRMVTRDDLIWALECVLSRAFNGRFGGGQNSALLSAGLLVASGAAYVLTEQPVWALVAALALLPLTLPELGSINSALTGR--SATASSDYVLVPFVDSMNHVTSAKTELSFSPVSGDLSVSVN 909
P +S LKA VAE+ R TS E+SG +RGED+FERWA QAGI+APKLRHEVFAD L+G LR +AVEATSKSEQLVTVPAKAAISLTASES+PFRSWVS EFW+SQQWYVKLALKLLWERQLGAASAVEGYVNVLP QGSFETLIHWTD+ELD LKYS+CAASAKRQRA WDKLH+DL ARCPEGAGR VTRDDL+WALECVLSRAFNGRFGGGQ SA+LSAGL ASGAAY +TEQPVW LVAALALLPLTLPELGS+ +A++G+ + A+SDYVLVPFVDSMNHVTSAKTELSFSPVSGDL VSVN
Sbjct: 54 PAESRLKAEAVAEDSRSTSSEKSGERRGEDRFERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPVQGSFETLIHWTDQELDTLKYSRCAASAKRQRAAWDKLHEDLVARCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAVLSAGLFAASGAAYAVTEQPVWVLVAALALLPLTLPELGSLQAAVSGKPDAKAAASDYVLVPFVDSMNHVTSAKTELSFSPVSGDLGVSVN 361
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: D7G8L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L0_ECTSI) HSP 1 Score: 365 bits (936), Expect = 1.260e-123 Identity = 185/221 (83.71%), Postives = 201/221 (90.95%), Query Frame = 1
Query: 1 PTQSCLKAGLVAEE-RGTSPERSGGQRGEDQFERWAGQAGIKAPKLRHEVFADDLIGQLR--RAVEATSKSEQLVTVPAKAAISLTASESSPFRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAARCPEGAGRMVTRDDLIWALECVLSRAFNGRFGGGQNSALLSA 654
P +SCLKA VA++ R TS E+SG +RGED+FERWA QAGI+APKLRHEVFAD L+G LR +AVEATSKSEQLVTVPAKAAISLTASES+PFRSWVS EFW+SQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTD+ELDAL+YS+CAASAKRQRA WDKLH+DL RCPEGAGR VTRDDL+WALECVLSRAFNGRFGGGQ SA L A
Sbjct: 54 PAESCLKAEAVAQDSRSTSSEKSGERRGEDRFERWAAQAGIRAPKLRHEVFADGLVGDLRGLKAVEATSKSEQLVTVPAKAAISLTASESTPFRSWVSPEFWDSQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDQELDALEYSRCAASAKRQRAAWDKLHEDLVVRCPEGAGRAVTRDDLVWALECVLSRAFNGRFGGGQKSAPLMA 274
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: A0A7S3XNH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNH5_HETAK) HSP 1 Score: 193 bits (490), Expect = 2.400e-52 Identity = 120/278 (43.17%), Postives = 162/278 (58.27%), Query Frame = 1
Query: 91 FERWAGQAGIKAPKLRHEVFADDLIGQLRRAVEATSK---SEQLVTVPAKAAISLTASESSPFRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAARCPEGAGRMVTRDDLIWALECVLSRAFNGRFGGGQNSALLSAGL--LVASGAAYVLTEQPVWALVAALALLPLTLPELGSINSALTGRSATAS-SDYVLVPFVDSMNHVTSAKTELSFSPVSGDLSVSV 906
FE WA IK LRHE F + +G + ++A K +QLV +P K IS SE PF W+S+ FW+ Q Y++LALKLLWE++LG SAV+ YV++LP + +TL +WTDEELD L+Y S RQR WD+LH+ L + P GA ++L WAL CVLSRAF G G QN A L+ L L+A YV + P W L AA AL LP G++ A T S+ VL+P +DS+NH T+ +T+L F+P++ +SV
Sbjct: 66 FENWAQNKNIKFDGLRHEQF--EFLGSKIQGIKALGKVDAGKQLVQLPKKFTISTYVSEKCPFPGWISNSFWDKQPNYIRLALKLLWEKKLGENSAVQAYVDLLPDPENLDTLYYWTDEELDLLRYPVLKNSVLRQRKEWDELHKQLVSSSPGGAEGAPAPEELAWALGCVLSRAFAGARTGLQNRATLAVQLAALLAGAGLYVAQDSP-WGLAAAAAL---ALP--GTLQEARTAMDPELQKSELVLLPMIDSINHQTTVETDLGFNPLTESFGISV 335
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: A0A7S3XME2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XME2_HETAK) HSP 1 Score: 193 bits (490), Expect = 2.680e-52 Identity = 120/278 (43.17%), Postives = 162/278 (58.27%), Query Frame = 1
Query: 91 FERWAGQAGIKAPKLRHEVFADDLIGQLRRAVEATSK---SEQLVTVPAKAAISLTASESSPFRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAARCPEGAGRMVTRDDLIWALECVLSRAFNGRFGGGQNSALLSAGL--LVASGAAYVLTEQPVWALVAALALLPLTLPELGSINSALTGRSATAS-SDYVLVPFVDSMNHVTSAKTELSFSPVSGDLSVSV 906
FE WA IK LRHE F + +G + ++A K +QLV +P K IS SE PF W+S+ FW+ Q Y++LALKLLWE++LG SAV+ YV++LP + +TL +WTDEELD L+Y S RQR WD+LH+ L + P GA ++L WAL CVLSRAF G G QN A L+ L L+A YV + P W L AA AL LP G++ A T S+ VL+P +DS+NH T+ +T+L F+P++ +SV
Sbjct: 66 FENWAQNKNIKFDGLRHEQF--EFLGSKIQGIKALGKVDAGKQLVQLPKKFTISTYVSEKCPFPGWISNSFWDKQPNYIRLALKLLWEKKLGENSAVQAYVDLLPDPENLDTLYYWTDEELDLLRYPVLKNSVLRQRKEWDELHKQLVSSSPGGAEGAPAPEELAWALGCVLSRAFAGARTGLQNRATLAVQLAALLAGAGLYVAQDSP-WGLAAAAAL---ALP--GTLQEARTAMDPELQKSELVLLPMIDSINHQTTVETDLGFNPLTESFGISV 335
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: A0A7S2UY30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY30_9STRA) HSP 1 Score: 140 bits (354), Expect = 7.670e-37 Identity = 75/172 (43.60%), Postives = 104/172 (60.47%), Query Frame = 1
Query: 91 FERWAGQAGIKAPKLRHEVFADDLIGQLRRAVEAT---SKSEQLVTVPAKAAISLTASESSPFRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAARCPEGAGRMVTRDDLIWALECVL 597
FE WA +GIK L+H F D +G+ V+A + ++LV VP IS T SE PF WV +FW Q Y++LALKLLWER+LG+ S +EGY+ LP SF TL HW+ EEL+ L+ + + Q+ TW + +L P+GAG+ +T +DL+WAL+CVL
Sbjct: 70 FEDWAKGSGIKFDGLKHVDF--DYMGESAPGVKADVDIPERKRLVFVPKDRTISATPSEDCPFPDWVDGDFWNRQPLYMRLALKLLWERKLGSQSKMEGYIKSLPEPDSFNTLQHWSAEELEYLRDPILIETVQAQQGTWKDTYNELTLFSPDGAGKDLTEEDLVWALDCVL 239
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: A0A0G4FC07_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FC07_VITBC) HSP 1 Score: 126 bits (316), Expect = 6.080e-29 Identity = 103/295 (34.92%), Postives = 144/295 (48.81%), Query Frame = 1
Query: 91 FERWAGQ-AGIKAPKLRHEVFADDLIGQLRRAVEATSK------------SEQLVTVPAKAAISLTASESSP--FRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAAR-CPEGAGRMVTRDDLIWALECVLSRAFNGRFGGGQNSALLSAGLLVASGAAYVLT-----------EQPVWALVA--ALALLPLTLPELGSINSALTGRSAT--ASSDYVLVPFVDSMNHVTSAKTELSFSPV 882
FE+WA + A + + H F D G+ ++ A + E L+ VP AAI TA+ + P W+++ +W+ V+LALKLL E++ G AS YV LP GSF T +HW+D+EL LK + KRQR W LH+DL R + +G ++ +D WALE V SRAF G F Q S LL L +A A + P+ +VA A ALLP G +SAL GR SD LVP +DS+NH+T ++ + + V
Sbjct: 105 FEQWAREKARVMFQSVSHGYFLDSNRGKPALSLAALQRCRGVKVNADVKAGEALIAVPIDAAIVATANGTLPEELSGWLNAPYWKEASLPVRLALKLLHEKEKGEASEWAEYVAFLPPVGSFPTPLHWSDDELQKLKLGRMIEMVKRQREGWRGLHEDLLQRGLKDASGGSLSWEDFAWALEIVSSRAFAGNFT--QTSPLLLGALQLAWAIAVAFAIVQLYTSSGQADPPIPLIVAGGAAALLP------GIASSALEGRRGADKGGSDLALVPVLDSVNHLTVSEAQFGYDGV 391
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: A0A7S3EP57_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EP57_9RHOD) HSP 1 Score: 110 bits (275), Expect = 8.530e-24 Identity = 85/266 (31.95%), Postives = 138/266 (51.88%), Query Frame = 1
Query: 100 WAGQAGIKAPKLRHEVFADDLIGQLRRAVEATSKSEQLVTVPAKAAI-SLTASESSPFRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAARCPEGAGRMVTRDDLIWALECVLSRAFNGR-----FGGGQNSALLSAGLLVASGAAYVL-TEQPVWAL-VAALALLPLTLPELGSINSALTGRSATASSDYVLVPFVDSMNHVTSAKTELSF 873
WA GI+ + FA ++ G + A + S +V VP + + S + E++P S+V+S +W+SQ+W+V+LAL+L++++Q + GYVN LP +F T HWT EEL +Y Q+ W +LH+ L + R V D+ +WALECV SRAF+G FG + + L VA+ ++ +EQ + L +A +ALL L + A+ G Y+L P +D NH + A++++S+
Sbjct: 36 WARDGGIQWNVMNLHTFAGNVRGMI--AEQDFDASSAIVKVPKEMVLESNSIPETNPIPSFVTSSYWKSQRWWVRLALRLVYQKQTDKKPNLSGYVNALPK--TFSTPFHWTAEELQETQYIPIQKQVVNQQQEWKRLHRLLTENLKDE--RSVEFDEFVWALECVRSRAFSGEAEATPFGERLKTIAFAGALSVAALTLHLADSEQVLNGLSLAVIALLSYDLI-YPRVQKAIGGEEWKR---YILCPIIDFCNHSSRAESDISY 291
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: A0A5J4XRG8_9CHLO (N-methyltransferase (ISS) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XRG8_9CHLO) HSP 1 Score: 107 bits (268), Expect = 1.840e-23 Identity = 59/158 (37.34%), Postives = 88/158 (55.70%), Query Frame = 1
Query: 181 AVEATSKSEQLVTVPAKAAISLTASESSPFRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAARCPEGAGRMVTRDDLIWALECVLSRAFNGRFGGGQNSALLSA 654
A A + + +VT+P AA+ +T PF + +W QW+ K+AL LL ER+ G SAV GY+ LPA+ F+TL HW+ EEL L Y ++Q+ W ++++ A + V D+L+WALECV SRAF+G + G + L+A
Sbjct: 3 AATAINTGDSVVTLPRTAALLVTPKMKCPFPDLIDQAYWAKSQWFEKMALMLLHERKKGKNSAVSGYIEQLPAR--FDTLFHWSPEELQLLMYPPLIQQVQQQKQYWHDHYKNVKAASSDNP---VGEDELVWALECVRSRAFSGPYSGESQTTGLTA 155
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: A0A7S3ER15_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ER15_9RHOD) HSP 1 Score: 105 bits (262), Expect = 5.120e-23 Identity = 62/173 (35.84%), Postives = 96/173 (55.49%), Query Frame = 1
Query: 100 WAGQAGIKAPKLRHEVFADDLIGQLRRAVEATSKSEQLVTVPAKAAI-SLTASESSPFRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFETLIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAARCPEGAGRMVTRDDLIWALECVLSRAFNG 615
WA GI+ + FA ++ G + A + S +V VP + + S + E++P S+V+S +W+SQ+W+V+LAL+L++++Q + GYVN LP +F T HWT EEL +Y Q+ W +LH+ L + R V D+ +WALECV SRAF+G
Sbjct: 36 WARDGGIQWNVMNLHTFAGNVRGMI--AEQDFDASSAIVKVPKEMVLESNSIPETNPIPSFVTSSYWKSQRWWVRLALRLVYQKQTDKKPNLSGYVNALPK--TFSTPFHWTAEELQETQYIPIQKQVVNQQQEWKRLHRLLTENLKDE--RSVEFDEFVWALECVRSRAFSG 202
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Match: A0A7S3WKM2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WKM2_EMIHU) HSP 1 Score: 100 bits (249), Expect = 2.260e-20 Identity = 99/296 (33.45%), Postives = 138/296 (46.62%), Query Frame = 1
Query: 49 TSPERSGGQRGEDQFERWAGQAGIKAPKLRHEVFADDLIGQLRRAVEATSKSEQLVTVP-------AKAAISLTASESSPFRSWVSSEFWESQQWYVKLALKLLWERQLGAASAVEGYVNVLPAQGSFET-LIHWTDEELDALKYSKCAASAKRQRATWDKLHQDLAARCPEGAGRMVTRDDLIWALECVLSRAFNGRFGGGQNSALLSAGLLVASGAAYVLTE-------QPVWA---LVAALALLPLTLPELGSINSALTGRSATASS-DYVLVPFVDSMNHVTSAKTELSFSP 879
T+P +GG FE WA AGI APK+R + AD+L + A + E L VP A A+ T + +SP + W S W+ +L++ LL E + G AS + GY++ LP+ SFE L+ WTD EL L+Y AA+ + QR + +L + L A AG VT ++L WA + VLSRAF G+ A A + S AA + Q W L +A LP L + A+ G S L+P +DS NH + A SF P
Sbjct: 40 TTPPPAGGIA--SSFEGWASSAGIVAPKIRIDD-ADELRNVIVTAD--VEEGEVLCVVPRTRCLDLASLAVDPTKAGASPCERLAPTRLWASLDWHERLSVWLLAEARRGRASEICGYIDYLPSPASFEDGLLDWTDAELAELRYPPLAAAVREQRDSIRRLLEALRAGGGADAGS-VTLEELSWAQQLVLSRAFASDINKGERGATSGA---MGSRAAPLPXXXXXKSGFQKAWERSELSTVVATRMPKLPSLDDLKGAIGGEPVNDPSFAMALMPMLDSFNHKSGAVNGCSFDP 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1393.3124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1393.3124.1 >prot_H-canaliculatus_F_contig1393.3124.1 ID=prot_H-canaliculatus_F_contig1393.3124.1|Name=mRNA_H-canaliculatus_F_contig1393.3124.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=303bp PTQSCLKAGLVAEERGTSPERSGGQRGEDQFERWAGQAGIKAPKLRHEVFback to top mRNA from alignment at H-canaliculatus_F_contig1393:16650..20613+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1393.3124.1 ID=mRNA_H-canaliculatus_F_contig1393.3124.1|Name=mRNA_H-canaliculatus_F_contig1393.3124.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3964bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1393:16650..20613+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1393:16650..20613+ >mRNA_H-canaliculatus_F_contig1393.3124.1 ID=mRNA_H-canaliculatus_F_contig1393.3124.1|Name=mRNA_H-canaliculatus_F_contig1393.3124.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1818bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1393:16650..20613+ (Hapterophycus canaliculatus Oshoro5f female)back to top |