prot_H-canaliculatus_F_contig10290.306.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10290.306.1
Unique Nameprot_H-canaliculatus_F_contig10290.306.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length70
Homology
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: D7FYI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI2_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 3.670e-41
Identity = 65/69 (94.20%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPRA 69
            MLAIASNQ+RDALKV+HS+SCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYP+A
Sbjct:  277 MLAIASNQQRDALKVVHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPQA 345          
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: A0A6H5KQH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH1_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 3.730e-40
Identity = 66/69 (95.65%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPRA 69
            MLAIASNQKRDALKV+HS+SCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYP+A
Sbjct:  509 MLAIASNQKRDALKVVHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPQA 577          
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: A0A388JUK5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JUK5_CHABU)

HSP 1 Score: 99.8 bits (247), Expect = 6.600e-23
Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPRA 69
            +LA++SN  RDAL+++H  S T F+NWPT RTP+ Y  +LDFSPGGGFLAVGN +G  LLYR+RHY RA
Sbjct:  455 ILAMSSNNNRDALRLVHVPSLTVFSNWPTTRTPLAYIHSLDFSPGGGFLAVGNSQGRALLYRLRHYDRA 523          
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: W7T4E2_9STRA (U3 small nucleolar rna-associated protein 18 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4E2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.270e-21
Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHY 66
            +LA+AS   RDAL+V+H  S T F+NWPT +TP+RYP AL FSP  G LAVGNDRG VLLYR+RHY
Sbjct:  550 LLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHY 615          
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: A0A835Z2C0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2C0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.350e-21
Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHY 66
            +LAIAS++K+DAL+++H ++ T F NWPT+RTP+ YPF LDFSP   FLAVGND+G VLLYR+  Y
Sbjct:  328 VLAIASSEKKDALRLVHVTTGTVFANWPTQRTPLGYPFCLDFSPSSNFLAVGNDKGRVLLYRLIPY 393          
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: A0A087SJ35_AUXPR (U3 small nucleolar RNA-associated protein 18-like protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SJ35_AUXPR)

HSP 1 Score: 94.0 bits (232), Expect = 6.160e-21
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPRA 69
            +LA+AS  KRDAL+++H  S T F+NWPT R+P+ Y   LDFSPGGG LA+GN +G V+LYR+ HYP+A
Sbjct:  387 VLAMASRMKRDALRLLHVPSGTVFSNWPTSRSPLGYVHCLDFSPGGGSLAIGNAKGRVVLYRLHHYPQA 455          
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: A0A482UD89_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UD89_9ARCH)

HSP 1 Score: 89.4 bits (220), Expect = 7.800e-21
Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPRA 69
            +L ++S + RD+++V+H +S T F+NWPT RTP+ Y  A DFSP  G+LAVGND+G VLLYR+ HY  A
Sbjct:  107 LLVMSSQRGRDSMRVVHCASGTVFSNWPTARTPLHYVTATDFSPHSGYLAVGNDKGRVLLYRVNHYQEA 175          
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: A0A8J9WMU6_9CHLO (U3 small nucleolar RNA-associated protein 18 homolog n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WMU6_9CHLO)

HSP 1 Score: 93.2 bits (230), Expect = 1.540e-20
Identity = 39/66 (59.09%), Postives = 52/66 (78.79%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHY 66
            MLA+AS  K+DAL+++H  SCT F+NWPT R+P+ Y  +L FSPGGG+LA+GN +G  LLYR+ HY
Sbjct:  551 MLAMASRMKKDALRLVHLPSCTVFSNWPTSRSPLGYVHSLAFSPGGGYLAIGNAKGRTLLYRLHHY 616          
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: A0A7S3QNQ7_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QNQ7_DUNTE)

HSP 1 Score: 93.2 bits (230), Expect = 1.560e-20
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPR 68
            +LAIAS  K+DA++++H  + T F+NWPT R+P+ Y  +L FSPGGGFLAVGN RG VLLYR+ HY +
Sbjct:  596 VLAIASRMKKDAMRLVHMPTLTVFSNWPTSRSPLHYVHSLAFSPGGGFLAVGNARGRVLLYRLHHYSK 663          
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Match: A0A433PPT5_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PPT5_9FUNG)

HSP 1 Score: 92.8 bits (229), Expect = 2.100e-20
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPRA 69
            ML +AS  K+D  K++H  S T F+NWPT  TP+ Y    DFSPGGG+LA+GND+G VLLYR+ HYP A
Sbjct:  534 MLGLASRSKKDQFKLVHLPSMTVFSNWPTSGTPLSYVNCFDFSPGGGYLAIGNDKGRVLLYRMGHYPGA 602          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10290.306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI2_ECTSI3.670e-4194.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQH1_9PHAE3.730e-4095.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A388JUK5_CHABU6.600e-2363.77Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
W7T4E2_9STRA1.270e-2166.67U3 small nucleolar rna-associated protein 18 n=2 T... [more]
A0A835Z2C0_9STRA4.350e-2162.12WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A087SJ35_AUXPR6.160e-2159.42U3 small nucleolar RNA-associated protein 18-like ... [more]
A0A482UD89_9ARCH7.800e-2155.07Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8J9WMU6_9CHLO1.540e-2059.09U3 small nucleolar RNA-associated protein 18 homol... [more]
A0A7S3QNQ7_DUNTE1.560e-2058.82Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A433PPT5_9FUNG2.100e-2057.97WD40-repeat-containing domain protein n=1 Tax=Endo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..65
e-value: 2.4E-21
score: 78.1
NoneNo IPR availablePANTHERPTHR18359WD-REPEAT PROTEIN-RELATEDcoord: 1..66
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10290contigH-canaliculatus_F_contig10290:64..273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10290.306.1mRNA_H-canaliculatus_F_contig10290.306.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10290 46..273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10290.306.1 ID=prot_H-canaliculatus_F_contig10290.306.1|Name=mRNA_H-canaliculatus_F_contig10290.306.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=70bp
MLAIASNQKRDALKVIHSSSCTPFTNWPTERTPVRYPFALDFSPGGGFLA
VGNDRGCVLLYRIRHYPRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf