mRNA_H-canaliculatus_F_contig13697.2960.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: A0A6H5JB66_9PHAE (Methylenetetrahydrofolate reductase (NAD(P)H) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB66_9PHAE) HSP 1 Score: 142 bits (359), Expect = 2.250e-39 Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNALAKCK 231
T GVKNLM+RLGRMKATKPLFVDFTWGAGGSTA+LTLDLT RTKKEHGLVPNMHLTCTNMPVDKID+ALA+CK
Sbjct: 38 TDTGVKNLMERLGRMKATKPLFVDFTWGAGGSTAELTLDLTTRTKKEHGLVPNMHLTCTNMPVDKIDHALAQCK 111
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: A0A836C869_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C869_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.680e-27 Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNALAKCK 231
T QGV NL +RL R+K P+F DFTWGAGGSTADLTLDLTL K HGL PNMHLTCTNMP+++I++AL +C+
Sbjct: 43 TTQGVDNLRERLQRLKKVGPVFADFTWGAGGSTADLTLDLTLEAKHAHGLRPNMHLTCTNMPLERIESALRRCR 116
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: A0A836CIM9_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIM9_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.520e-27 Identity = 51/74 (68.92%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNALAKCK 231
T GV NL +R+ R+K P F+DFTWGAGG+TADLTLDL L K EHGL PNMHLTCTNMPV KIDNAL C+
Sbjct: 40 TVAGVVNLRERIQRLKRVAPFFIDFTWGAGGNTADLTLDLVLEAKLEHGLEPNMHLTCTNMPVLKIDNALQACR 113
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: A0A7S1C6C6_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6C6_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.880e-26 Identity = 51/74 (68.92%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNALAKCK 231
T GV NL RLGRM +PL+VDFTWGAGGSTADLTL+LT+ +KK GL PNMHLTCTNMPV+KI AL K
Sbjct: 39 TDDGVANLYKRLGRMAQQEPLYVDFTWGAGGSTADLTLELTVESKKRFGLEPNMHLTCTNMPVEKITTALEGAK 112
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: A0A7S1ALW9_NOCSC (Methylenetetrahydrofolate reductase (NAD(P)H) (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ALW9_NOCSC) HSP 1 Score: 100 bits (250), Expect = 9.430e-25 Identity = 48/74 (64.86%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNALAKCK 231
T +GVKNL R+ RMK PLF+DFTWGAGGST+DLT+ L + K E G V NMHLTCTNM DK+D ALA CK
Sbjct: 33 TEEGVKNLYKRILRMKTLDPLFLDFTWGAGGSTSDLTMQLCDKVKNEFGAVANMHLTCTNMEKDKVDVALADCK 106
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: A0A7S3GGD2_9EUKA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GGD2_9EUKA) HSP 1 Score: 100 bits (249), Expect = 1.200e-23 Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNALAKCK 231
T +GVKNL R GRMK P+FVD TWGAGGST+DLT+++ + K E+GL PNMHLTCTNM K+++AL KC+
Sbjct: 28 TDEGVKNLYARFGRMKEQHPVFVDVTWGAGGSTSDLTVEICEKAKHEYGLEPNMHLTCTNMVPQKVEDALKKCR 101
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: A0A7S2W8U0_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W8U0_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.480e-23 Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNAL 219
T QGV+NL RL RM PL+VDFTWGAGGST+DLTL+L+ + ++++ LV NMHLTCTNMP DK+DNAL
Sbjct: 38 TEQGVENLKKRLARMAEFNPLYVDFTWGAGGSTSDLTLELSQKAQEDNKLVSNMHLTCTNMPKDKLDNAL 107
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: W7TUD6_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUD6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 4.040e-23 Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNALAKCK 231
TP+GV+ L +RL M PLFVDFTWGAGGSTA+LTL+LT+ ++ GL+ NMHLTCTNMP +K+ +AL K
Sbjct: 42 TPEGVEKLYERLAEMAPYNPLFVDFTWGAGGSTAELTLELTIEARRRFGLIANMHLTCTNMPTEKVVDALKSAK 115
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: A0A7S1FBX8_NOCSC (Multifunctional fusion protein (Fragment) n=2 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FBX8_NOCSC) HSP 1 Score: 100 bits (250), Expect = 4.090e-23 Identity = 48/74 (64.86%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNALAKCK 231
T +GVKNL R+ RMK PLF+DFTWGAGGST+DLT+ L + K E G V NMHLTCTNM DK+D ALA CK
Sbjct: 33 TEEGVKNLYKRILRMKTLDPLFLDFTWGAGGSTSDLTMQLCDKVKNEFGAVANMHLTCTNMEKDKVDVALADCK 106
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Match: A0A6V1V0A8_HETAK (Methylenetetrahydrofolate reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V0A8_HETAK) HSP 1 Score: 100 bits (250), Expect = 4.110e-23 Identity = 46/74 (62.16%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 10 TPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEHGLVPNMHLTCTNMPVDKIDNALAKCK 231
T +GV+NL++R+ RMK+ PLFVDFTWGAGGST++LTLDL+L+ ++E G+ NMHLTCTNM K+D AL CK
Sbjct: 31 TAKGVENLVERIQRMKSIDPLFVDFTWGAGGSTSELTLDLSLKAQQEIGVQANMHLTCTNMEAAKVDAALEGCK 104 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13697.2960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13697.2960.1 >prot_H-canaliculatus_F_contig13697.2960.1 ID=prot_H-canaliculatus_F_contig13697.2960.1|Name=mRNA_H-canaliculatus_F_contig13697.2960.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=77bp MHVTPQGVKNLMDRLGRMKATKPLFVDFTWGAGGSTADLTLDLTLRTKKEback to top mRNA from alignment at H-canaliculatus_F_contig13697:188..418- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13697.2960.1 ID=mRNA_H-canaliculatus_F_contig13697.2960.1|Name=mRNA_H-canaliculatus_F_contig13697.2960.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=231bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13697:188..418- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13697:188..418- >mRNA_H-canaliculatus_F_contig13697.2960.1 ID=mRNA_H-canaliculatus_F_contig13697.2960.1|Name=mRNA_H-canaliculatus_F_contig13697.2960.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=462bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13697:188..418- (Hapterophycus canaliculatus Oshoro5f female)back to top |