prot_H-canaliculatus_F_contig10279.290.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10279.290.1
Unique Nameprot_H-canaliculatus_F_contig10279.290.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length287
Homology
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: D7FHI7_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI7_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.600e-19
Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    3 VATGDLDGDGDTDIIASYFDSWYLYYGSIEGGRVTWHENDGNGTFAVGYDIGLLEGINSAVAADIDNDGDLDIVACTG-GGRIVYFEN 89
            V T D+DGDGD DII++ FD  +   GS   GR+ W ENDG+G+FA G D+GLL+   + VA D+DNDGD+D+VAC G GG IV++EN
Sbjct:  272 VVTADIDGDGDIDIISASFDGNHTA-GSFPDGRILWLENDGSGSFAEGRDVGLLDSARNVVAVDLDNDGDIDLVACDGVGGSIVWYEN 358          
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: D7FHI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI6_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.610e-17
Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    3 VATGDLDGDGDTDIIASYFDSWYLYYGSIEGGRVTWHENDGNGTFAVGYDIGLLEGINSAVAADIDNDGDLDIVACTG-GGRIVYFEN 89
            V T D+DGDGD DII++ FD  +   G+   GR+ W ENDG G+FA G D+GLL+   + VA D+DNDGD+D++AC   GG IV++EN
Sbjct:  162 VVTADIDGDGDMDIISASFDGNHTA-GNFPDGRILWLENDGLGSFAEGRDVGLLDSARNVVAVDLDNDGDIDLLACENVGGHIVWYEN 248          
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: A0A6H5K481_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K481_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 4.470e-8
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    2 YVATGDLDGDGDTDIIA-SYFDSWYLYYGSIEGGRVTWHEN-DGNGTFAVGYDIGLLEGINSAVA 64
            YVA GDLDGDGD D+++ SY+D           GRVTW+EN DG GTFAVG DI +L  + SAVA
Sbjct:  259 YVAAGDLDGDGDLDVVSGSYYD-----------GRVTWYENTDGAGTFAVGQDIDILPSVASAVA 312          
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: A0A2N2YDB2_9BACT (Uncharacterized protein n=2 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2N2YDB2_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 5.350e-8
Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    6 GDLDGDGDTDIIASYFDSWYLYYGSIE-GGRVTWHEN-DGNGTFAVG-YDIGLLEGINSAVAADIDNDGDLDIVACTGGGR-IVYFEN 89
            GD+DGDG  D+I           G+I+  G V W+EN DG GTF    Y    L G  S VA D+DNDGDLD++A TGG + +V+FEN
Sbjct:  125 GDIDGDGXVDLI-----------GAIDLSGSVVWYENLDGLGTFGPRTYITFTLNGCRSIVAQDMDNDGDLDVIAATGGNKTVVWFEN 201          
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: A0A349NRA1_9FLAO (Uncharacterized protein (Fragment) n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A349NRA1_9FLAO)

HSP 1 Score: 60.1 bits (144), Expect = 2.170e-7
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    1 RYVATGDLDGDGDTDI-IASYFDSWYLYYGSIEGGRVTWHEN-DGNGTFAVGYDI-GLLEGINSAVAADIDNDGDLDIV-ACTGGGRIVYFEN 89
            R V   D DGDGD D+ ++S++D            ++TW EN DG GT+     I  + +   +A+AADIDNDGD+D+V A     R+++FEN
Sbjct:   38 RSVNAADFDGDGDMDLLVSSFYDE-----------KITWFENIDGQGTYGTPNIITAIADNAYNAIAADIDNDGDMDVVSAYVDDNRVIWFEN 119          
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: A0A518I049_9BACT (FG-GAP repeat protein n=1 Tax=Stieleria neptunia TaxID=2527979 RepID=A0A518I049_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 3.340e-7
Identity = 37/82 (45.12%), Postives = 46/82 (56.10%), Query Frame = 0
Query:    1 RYVATGDLDGDGDTDIIASYFDSWYLYYGSIEGGRVTWHENDGNGTFA---VGYDIGLLEGINSAVAADIDNDGDLDIVACT 79
            R  A GDLDGDGDTDI+ +Y D           GRV W EN GN TF    V Y+ G ++ +     ADID DG+LD++  T
Sbjct:  215 RATAMGDLDGDGDTDIVTAYRDK----------GRVIWFENTGNQTFVERIVAYNAGKVDDV---AIADIDQDGNLDVLVAT 283          
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: A0A2E8MZU0_9RICK (Cadherin domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8MZU0_9RICK)

HSP 1 Score: 61.6 bits (148), Expect = 4.510e-7
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    2 YVATGDLDGDGDTDIIASYFDSWYLYYGSIEGGRVTWHENDGNGTFAVGYDIGLLEGINSAVA-ADIDNDGDLDIVACTGGGRIVYFEN 89
            YV+T D+DGDGD D+I+   D  + Y+ + +G  +     D        +D GL  G +S    ADIDNDGDLD+++ +GGG I Y+EN
Sbjct:  261 YVSTADIDGDGDLDVISGALDGTFYYFRNDDGTFIAQTGTDNP------FD-GLNVGSDSRHEFADIDNDGDLDLISGSGGGAIYYYEN 342          
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: UPI00166CF435 (FG-GAP-like repeat-containing protein n=1 Tax=Hymenobacter cavernae TaxID=2044852 RepID=UPI00166CF435)

HSP 1 Score: 62.0 bits (149), Expect = 4.930e-7
Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 0
Query:    1 RYVATGDLDGDGDTDIIASYFDSWYLYYGSIEG-GRVTWHENDGNGTFAVGYDIGLLEGINSAVAADIDNDGDLDIVACTG 80
            R VA GD+D DGD DI+A+   +  L  GS  G G VT   N G+GTF  G  + + +GIN     D+DNDGDLD++A  G
Sbjct:  259 RSVALGDVDADGDLDILAT--SNRELGGGSYLGPGLVTVLLNSGSGTFTAGQQVEMPQGINQVSVGDLDNDGDLDLLASDG 337          
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: A0A2N2Y6Z4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-2 TaxID=2013688 RepID=A0A2N2Y6Z4_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 8.860e-7
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 0
Query:    3 VATGDLDGDGDTDIIASYFDSWYLYYGSIEGGRVTWHEN-DGNGTFAVGYD-IGLLEGINSAVAADIDNDGDLDIVACTG 80
            V + DLDGDGD DI+ +          S+    V W+EN DG G+F+ G+  I  L  +  A+AADIDNDGDLD++A +G
Sbjct:   38 VFSADLDGDGDKDILTA----------SVAAQTVAWYENLDGLGSFSTGHVLISNLLDVRDAIAADIDNDGDLDVIATSG 107          
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Match: A0A1G1SQ80_9BACT (IPT/TIG domain-containing protein n=1 Tax=Hymenobacter coccineus TaxID=1908235 RepID=A0A1G1SQ80_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 1.520e-6
Identity = 35/74 (47.30%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    3 VATGDLDGDGDTDIIASYFDSWYLYYGSIEGGRVTWHENDGNGTFAVGYDIGLLEGINSAVAADIDNDGDLDIV 76
            VA GDLDGDGD D++ASYFD+          G +    N+G GTF  G  I L  G+ S    D D DGDLD+V
Sbjct:  732 VALGDLDGDGDLDLVASYFDNGK--------GGIEVRFNNGAGTFGGGTSINLPVGVFSLALGDFDGDGDLDLV 797          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10279.290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHI7_ECTSI2.600e-1955.68N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D7FHI6_ECTSI1.610e-1752.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K481_9PHAE4.470e-856.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2N2YDB2_9BACT5.350e-847.73Uncharacterized protein n=2 Tax=unclassified Bacte... [more]
A0A349NRA1_9FLAO2.170e-739.78Uncharacterized protein (Fragment) n=1 Tax=Flavoba... [more]
A0A518I049_9BACT3.340e-745.12FG-GAP repeat protein n=1 Tax=Stieleria neptunia T... [more]
A0A2E8MZU0_9RICK4.510e-741.57Cadherin domain-containing protein n=3 Tax=Bacteri... [more]
UPI00166CF4354.930e-746.91FG-GAP-like repeat-containing protein n=1 Tax=Hyme... [more]
A0A2N2Y6Z4_9BACT8.860e-745.00Uncharacterized protein (Fragment) n=1 Tax=Bactero... [more]
A0A1G1SQ80_9BACT1.520e-647.30IPT/TIG domain-containing protein n=1 Tax=Hymenoba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13517VCBScoord: 66..125
e-value: 1.3E-11
score: 44.9
NoneNo IPR availablePANTHERPTHR45460FAMILY NOT NAMEDcoord: 3..50
coord: 32..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..257
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 258..263
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 284..286
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..283
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..235
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 3..143
NoneNo IPR availableTMHMMTMhelixcoord: 236..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10279contigH-canaliculatus_F_contig10279:75..3183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10279.290.1mRNA_H-canaliculatus_F_contig10279.290.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10279 75..3873 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10279.290.1 ID=prot_H-canaliculatus_F_contig10279.290.1|Name=mRNA_H-canaliculatus_F_contig10279.290.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=287bp
RYVATGDLDGDGDTDIIASYFDSWYLYYGSIEGGRVTWHENDGNGTFAVG
YDIGLLEGINSAVAADIDNDGDLDIVACTGGGRIVYFENTDGKGNFAAAI
DVAEDGGVQEVLAVDLDGDGDLDLLTARGSCGSKDGGVQWYENLLLTAED
DDGTTDDSGTTDGPTPAPPTPAVPRSTAPTPAAPTPAAPTPAAPTPTVTT
PSPTSTKSSIEEESPPTLTDGATDTPDDERSVTNDVLIGVLSTVISAIVL
GVAKIFFSRRRSSSAAAAAAAAAAAAGATAAASEAS*
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