prot_H-canaliculatus_F_contig13496.2830.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13496.2830.1
Unique Nameprot_H-canaliculatus_F_contig13496.2830.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length284
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13496.2830.1 vs. uniprot
Match: D8LL83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL83_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.790e-13
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0 
Query:    1 ATGETATLWCLKDFVCGKETQAAMETLCRSHRHKAGRLASHRGVRAGEAIFRRRY 55
            ATGETATLWCLKDFVCGK+TQ AMETL R+ R KAGR A+HRG+  G  + RRRY
Sbjct:  471 ATGETATLWCLKDFVCGKDTQTAMETLNRTERQKAGRSANHRGL-GGTDVHRRRY 524
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BLAST of mRNA_H-canaliculatus_F_contig13496.2830.1 vs. uniprot
Match: A0A6H5JLF6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF6_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 9.770e-5
Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 0 
Query:    3 GETATLWCLKDFVCGKETQAAMETLCRS 30
            GETATLWCLKDFVCGK+TQ AMETL R+
Sbjct:  726 GETATLWCLKDFVCGKDTQTAMETLNRT 753
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13496.2830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL83_ECTSI1.790e-1372.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLF6_9PHAE9.770e-585.71Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13496contigH-canaliculatus_F_contig13496:976..3001 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13496.2830.1mRNA_H-canaliculatus_F_contig13496.2830.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13496 976..3001 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13496.2830.1 ID=prot_H-canaliculatus_F_contig13496.2830.1|Name=mRNA_H-canaliculatus_F_contig13496.2830.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=284bp
ATGETATLWCLKDFVCGKETQAAMETLCRSHRHKAGRLASHRGVRAGEAI
FRRRYSSSSPSSSSSLQTATPSQNASQAARQPAATVVVAAAAAAAATASS
AAAATAAASQARDDGASSRPRSIGSGSELNADGPNAGECPSTPPGAGSRD
DGSMSTANGPVPNADETPCVAKAPESSADGSPSAAHGSGPIANGFGSGNG
GSLSAADGARPSPAGSASPDVDGSPSNPNGFGSDADGGGSTATGCSNNWA
GPSGHRSGRSALPVSSGGSSPARSSGVGGGGASG
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