mRNA_H-canaliculatus_F_contig1335.2733.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A6H5L120_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L120_9PHAE) HSP 1 Score: 406 bits (1044), Expect = 2.400e-124 Identity = 282/440 (64.09%), Postives = 306/440 (69.55%), Query Frame = 3
Query: 156 MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTI-GTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQAKERNARETSAAAAXXXXXXXXXXXXXSPSLAGTGTPEGGEEGPAAKSTASSGLSSLPARASFATVAERRLTEEQIRNQHVPGTTSSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSFLDHALAESTAVRRQHQSRRNTRLGSSGGRRHSPLDGAGDNEGMSEFHADGIGDGEIQQVEDLMLMEALRLSVLEEQARRERSGDMMRAAT 1472
MGNVST+RRKSGSKELEKYCKPTGLYETCPWEERVVRRWIM+GQ+APRYPG+D PSFG G + + SVSA GV+ YEST+ T GPG XXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRT CCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPP+KED ++R+AEEQRTIEARIHAEQEELMRQ ERNARETSA XXXXXXXXXXXXX SFATVAERR+TE+QIR QHVP T XXXXX GS L HALA S A R H +RR +R+G GRR S L+GAG N+G +EFHADG+G+GEIQQVEDLML+EALRLSVLEEQARRERSGD+MRAAT
Sbjct: 1 MGNVSTTRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMDGQVAPRYPGADAPSFGPGKEASGSGGGGLG-SASVSAGGVIGYESTVRATFGPGA-------VGTGRSGGVGAAXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTTCCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSKEDHDKRMAEEQRTIEARIHAEQEELMRQVTERNARETSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP-------------------SFATVAERRMTEDQIRKQHVPPATXXXXXXXXXSIGRQSSMGAAAGARTAGGRVAP-------GS-LKHALAVSAAAGRHHHNRRGSRIGP--GRRRSYLEGAGGNDGGNEFHADGVGEGEIQQVEDLMLVEALRLSVLEEQARRERSGDLMRAAT 403
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: D8LDS6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS6_ECTSI) HSP 1 Score: 364 bits (935), Expect = 7.640e-109 Identity = 294/443 (66.37%), Postives = 317/443 (71.56%), Query Frame = 3
Query: 156 MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTI-GTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQAKERNARETSAAAAXXXXXXXXXXXXXSPSLAGTGTPEGGEEGPAAKSTASSGLSSLPARASFATVAERRLTEEQIRNQHVPGTTSSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SGSFLDHALAESTAVRRQHQSRRNTRLGSSGGRRHSPLDGAGDNEGMSEFHADGIGDGEIQQVEDLMLMEALRLSVLEEQARRERSGDMMRAATA 1475
MGNVST+RRKSGSKELEKYCKPTGLYETCPW+ERVVRRWIM+GQ+APRYPG+D PSFG XXXX + SVSA GV+ YE+T+ T GPG XXXXXXXXXXXXXXXXXXXXXXXXX TEECPICFMHYHGVNRT CCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPP++EDRE+R+AEEQRTIEARIHAEQEELMRQ KERNARETS XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX + LDHALA S A R H +RR +R+G GRR S L+GAG N+G EFHADG+G+GEIQQVEDLML+EALRLSVLEEQARRERSGD+MRAATA
Sbjct: 1 MGNVSTTRRKSGSKELEKYCKPTGLYETCPWDERVVRRWIMDGQVAPRYPGADAPSFGGPGKEASGGXXXXLGSASVSAGGVIGYETTVRATFGPGA-----VGTGRSGXXXXXXXXXXXXXXXXXXXXXXXXXKQTEECPICFMHYHGVNRTTCCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSEEDREKRMAEEQRTIEARIHAEQEELMRQVKERNARETSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAGGRVAPGSLDHALAVSAAAGRHHHNRRGSRIGP--GRRRSYLEGAGGNDGADEFHADGVGEGEIQQVEDLMLVEALRLSVLEEQARRERSGDLMRAATA 436
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A835Z3B9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B9_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.200e-45 Identity = 114/316 (36.08%), Postives = 145/316 (45.89%), Query Frame = 3
Query: 156 MGNV--STSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHA-------EQEELMRQAKERNARETSAAAAXXXXXXXXXXXXXSPSLAGTGTPEGGEEGPAAKSTASSGLSS----LPARASFATVAERRLTEEQIRNQHV 1064
MGN+ + S K ++ELE+YCKPTGLY +CPWEE+ VR+WI+EG++APR+P D P G EECPICFM H N T+CC KPLCTECYLQ+RPPR V CPFCN F+V Y GP + +++ RRL EEQR IEA+I A +Q E +++ E AR TSAAAA S A T GP A+ A +G S +P + ATV RR E ++R QH+
Sbjct: 1 MGNLPAAVSHHKGKNRELERYCKPTGLYPSCPWEEKTVRKWILEGKVAPRFPPLDNPDDG-----------------------------------------------------------------------------AEECPICFMFCHATNTTVCCGKPLCTECYLQLRPPRVCVDCPFCNSGSFAVSYSGPLSADEKHRRLQEEQRVIEAKIRAAREEAEAQQAEYVKRQSESRARTTSAAAAAPVTVSRR-------SSAPISTTPPHSPGPTARGRAGAGGRSQSLDVPLATALATVDSRRQLESEMRRQHL 232
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A8K1C573_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C573_PYTOL) HSP 1 Score: 113 bits (283), Expect = 3.060e-24 Identity = 68/192 (35.42%), Postives = 87/192 (45.31%), Query Frame = 3
Query: 156 MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGP 728
MGN S +R S S+EL+++ PTGLY +CPW+ R VRR I+E +IAPR+PG D S ES T+ECPICFM+Y G +N CC KP+C+ECYLQ++PPR SV CPFCN FS++Y P
Sbjct: 1 MGN-SPPKRASISRELDRFTHPTGLYPSCPWDFRSVRRMILEKKIAPRFPGRD------------------------------SKESCF----------------------------------------------TQECPICFMYYPGSLNTATCCKKPICSECYLQLKPPRKSVCCPFCNREGFSIKYTAP 115
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A7S0HBL4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HBL4_9CRYP) HSP 1 Score: 113 bits (283), Expect = 3.790e-24 Identity = 77/225 (34.22%), Postives = 102/225 (45.33%), Query Frame = 3
Query: 156 MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPP--RSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQ 821
MGN SR KS K+ KPTGLY TC W+E+ V++ I + ++APRYPG + P GP +ECPICF+ Y G +NR+ CC KP+CTEC+LQ + P + ++ CPFCN +SV+Y G TKE+RE AEEQ+ IEA+I A + EL RQ
Sbjct: 1 MGN-KLSRNKSVD---SKFTKPTGLYPTCEWDEKTVKKLINKKKVAPRYPGREEP-------------------------------------GP----------------------------------------DLDECPICFLWYPGGLNRSKCCKKPICTECFLQFKKPTAQKAIQCPFCNSLNYSVKYTGQMTKEEREVLEAEEQKVIEAKIRARKAELSRQ 144
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A484DZ79_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ79_BRELC) HSP 1 Score: 112 bits (279), Expect = 7.890e-24 Identity = 61/193 (31.61%), Postives = 82/193 (42.49%), Query Frame = 3
Query: 165 VSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKE 740
+S+ R G++E+EKY +PTGLY TCPWE + RR I+E ++APR+PG + T ECPICFM Y G +N + CC+KP+C+ECYLQ+RPP+ + CPFCN F V+Y PP E
Sbjct: 11 ISSRRLTIGTREIEKYTQPTGLYPTCPWEHKAARRLILERKLAPRFPGQEAKE----------------------------------------------------------------------------GFFTLECPICFMFYPGNLNVSSCCSKPICSECYLQIRPPQKPICCPFCNQEAFGVQYAQPPPAE 127
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A7R9UGC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGC3_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.210e-23 Identity = 65/196 (33.16%), Postives = 82/196 (41.84%), Query Frame = 3
Query: 198 ELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEA 785
+LE +C+PTGLY +C W+ RVVRR I+ G++APR G+D P+ S+S +ECPICF +Y VN T CC +P+CTECYLQV+PPR CPFCN FS YL ED A+E RT A
Sbjct: 23 QLEAFCRPTGLYPSCSWDVRVVRRAILNGKLAPRMKGTDAPA----SLS------------------------------------------------------------------------DDECPICFFYYGKVNTTTCCKQPICTECYLQVKPPREDKACPFCNRECFSATYLPKERAED-----AKEDRTAAA 137
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: K3X652_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X652_GLOUD) HSP 1 Score: 110 bits (274), Expect = 4.180e-23 Identity = 64/194 (32.99%), Postives = 88/194 (45.36%), Query Frame = 3
Query: 156 MGNVST--SRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGP 728
MGN S+ SRR S ++ELEKY KPTGLY TCPWE++ RR I++ +IAPR+PG + + ES T+ECPICFM+Y G +N + CC K +C+EC+LQ++PP+ + CPFCN F ++Y P
Sbjct: 1 MGNNSSTSSRRSSVTRELEKYTKPTGLYPTCPWEQKAARRMIIDRKIAPRFPGRE------------------------------AKESCF----------------------------------------------TQECPICFMYYPGNLNVSTCCKKLICSECFLQMKPPKKMICCPFCNRDTFGIKYTAP 118
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A2P6NC34_9EUKA (RING-type domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NC34_9EUKA) HSP 1 Score: 110 bits (275), Expect = 6.980e-23 Identity = 63/215 (29.30%), Postives = 93/215 (43.26%), Query Frame = 3
Query: 201 LEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQAKERNAR 842
++ Y PTGLY+TC WE +V++R ++ +IAP YPG + + M EECPICF++Y G +NRT+CC K +CTEC+ Q+R P S CPFCN +FSV + GP + E++E+ E+QR +E +I EE+ + + N R
Sbjct: 19 VQAYTTPTGLYQTCSWEPKVIKRLVINKKIAPLYPGKEEAALTLADMD------------------------------------------------------------------------HEECPICFLYYPGGLNRTVCCKKGICTECFFQIRKPNVSASCPFCNKMEFSVIFTGPLSNEEKEKEAQEQQRVLELKIKMRNEEIQQDIQRENDR 161
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A7S4JDB5_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JDB5_GUITH) HSP 1 Score: 113 bits (283), Expect = 7.640e-23 Identity = 70/208 (33.65%), Postives = 95/208 (45.67%), Query Frame = 3
Query: 207 KYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRS--SVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQ 821
K+ KPTGLY TC W+E+ V++ I + ++APRYPG + P GP +ECPICF+ Y G +NR+ CC KP+CTEC+LQ + P + ++ CPFCN +SV+Y G TKE+RE AEEQ+ IEA+I A + EL RQ
Sbjct: 14 KFTKPTGLYPTCDWDEKTVKKLINKKKVAPRYPGREEP-------------------------------------GP----------------------------------------DLDECPICFLWYPGGLNRSKCCKKPICTECFLQFKKPNAQKAIQCPFCNSLNYSVKYTGQMTKEEREALEAEEQKVIEAKIRARKAELSRQ 144 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1335.2733.1 >prot_H-canaliculatus_F_contig1335.2733.1 ID=prot_H-canaliculatus_F_contig1335.2733.1|Name=mRNA_H-canaliculatus_F_contig1335.2733.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=471bp MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPback to top mRNA from alignment at H-canaliculatus_F_contig1335:14790..26854+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1335.2733.1 ID=mRNA_H-canaliculatus_F_contig1335.2733.1|Name=mRNA_H-canaliculatus_F_contig1335.2733.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=12065bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1335:14790..26854+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1335:14790..26854+ >mRNA_H-canaliculatus_F_contig1335.2733.1 ID=mRNA_H-canaliculatus_F_contig1335.2733.1|Name=mRNA_H-canaliculatus_F_contig1335.2733.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2826bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1335:14790..26854+ (Hapterophycus canaliculatus Oshoro5f female)back to top |