mRNA_H-canaliculatus_F_contig1335.2733.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1335.2733.1
Unique NamemRNA_H-canaliculatus_F_contig1335.2733.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A6H5L120_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L120_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 2.400e-124
Identity = 282/440 (64.09%), Postives = 306/440 (69.55%), Query Frame = 3
Query:  156 MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTI-GTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQAKERNARETSAAAAXXXXXXXXXXXXXSPSLAGTGTPEGGEEGPAAKSTASSGLSSLPARASFATVAERRLTEEQIRNQHVPGTTSSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSFLDHALAESTAVRRQHQSRRNTRLGSSGGRRHSPLDGAGDNEGMSEFHADGIGDGEIQQVEDLMLMEALRLSVLEEQARRERSGDMMRAAT 1472
            MGNVST+RRKSGSKELEKYCKPTGLYETCPWEERVVRRWIM+GQ+APRYPG+D PSFG G  +          + SVSA GV+ YEST+  T GPG                    XXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRT CCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPP+KED ++R+AEEQRTIEARIHAEQEELMRQ  ERNARETSA   XXXXXXXXXXXXX                                  SFATVAERR+TE+QIR QHVP  T    XXXXX                              GS L HALA S A  R H +RR +R+G   GRR S L+GAG N+G +EFHADG+G+GEIQQVEDLML+EALRLSVLEEQARRERSGD+MRAAT
Sbjct:    1 MGNVSTTRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMDGQVAPRYPGADAPSFGPGKEASGSGGGGLG-SASVSAGGVIGYESTVRATFGPGA-------VGTGRSGGVGAAXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTTCCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSKEDHDKRMAEEQRTIEARIHAEQEELMRQVTERNARETSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSP-------------------SFATVAERRMTEDQIRKQHVPPATXXXXXXXXXSIGRQSSMGAAAGARTAGGRVAP-------GS-LKHALAVSAAAGRHHHNRRGSRIGP--GRRRSYLEGAGGNDGGNEFHADGVGEGEIQQVEDLMLVEALRLSVLEEQARRERSGDLMRAAT 403          
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: D8LDS6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS6_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 7.640e-109
Identity = 294/443 (66.37%), Postives = 317/443 (71.56%), Query Frame = 3
Query:  156 MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTI-GTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQAKERNARETSAAAAXXXXXXXXXXXXXSPSLAGTGTPEGGEEGPAAKSTASSGLSSLPARASFATVAERRLTEEQIRNQHVPGTTSSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SGSFLDHALAESTAVRRQHQSRRNTRLGSSGGRRHSPLDGAGDNEGMSEFHADGIGDGEIQQVEDLMLMEALRLSVLEEQARRERSGDMMRAATA 1475
            MGNVST+RRKSGSKELEKYCKPTGLYETCPW+ERVVRRWIM+GQ+APRYPG+D PSFG         XXXX  + SVSA GV+ YE+T+  T GPG             XXXXXXXXXXXXXXXXXXXXXXXXX  TEECPICFMHYHGVNRT CCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPP++EDRE+R+AEEQRTIEARIHAEQEELMRQ KERNARETS    XXXXXXXXXXXXX                                                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +   LDHALA S A  R H +RR +R+G   GRR S L+GAG N+G  EFHADG+G+GEIQQVEDLML+EALRLSVLEEQARRERSGD+MRAATA
Sbjct:    1 MGNVSTTRRKSGSKELEKYCKPTGLYETCPWDERVVRRWIMDGQVAPRYPGADAPSFGGPGKEASGGXXXXLGSASVSAGGVIGYETTVRATFGPGA-----VGTGRSGXXXXXXXXXXXXXXXXXXXXXXXXXKQTEECPICFMHYHGVNRTTCCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPSEEDREKRMAEEQRTIEARIHAEQEELMRQVKERNARETSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAGGRVAPGSLDHALAVSAAAGRHHHNRRGSRIGP--GRRRSYLEGAGGNDGADEFHADGVGEGEIQQVEDLMLVEALRLSVLEEQARRERSGDLMRAATA 436          
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A835Z3B9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B9_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.200e-45
Identity = 114/316 (36.08%), Postives = 145/316 (45.89%), Query Frame = 3
Query:  156 MGNV--STSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHA-------EQEELMRQAKERNARETSAAAAXXXXXXXXXXXXXSPSLAGTGTPEGGEEGPAAKSTASSGLSS----LPARASFATVAERRLTEEQIRNQHV 1064
            MGN+  + S  K  ++ELE+YCKPTGLY +CPWEE+ VR+WI+EG++APR+P  D P  G                                                                              EECPICFM  H  N T+CC KPLCTECYLQ+RPPR  V CPFCN   F+V Y GP + +++ RRL EEQR IEA+I A       +Q E +++  E  AR TSAAAA               S A   T      GP A+  A +G  S    +P   + ATV  RR  E ++R QH+
Sbjct:    1 MGNLPAAVSHHKGKNRELERYCKPTGLYPSCPWEEKTVRKWILEGKVAPRFPPLDNPDDG-----------------------------------------------------------------------------AEECPICFMFCHATNTTVCCGKPLCTECYLQLRPPRVCVDCPFCNSGSFAVSYSGPLSADEKHRRLQEEQRVIEAKIRAAREEAEAQQAEYVKRQSESRARTTSAAAAAPVTVSRR-------SSAPISTTPPHSPGPTARGRAGAGGRSQSLDVPLATALATVDSRRQLESEMRRQHL 232          
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A8K1C573_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C573_PYTOL)

HSP 1 Score: 113 bits (283), Expect = 3.060e-24
Identity = 68/192 (35.42%), Postives = 87/192 (45.31%), Query Frame = 3
Query:  156 MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGP 728
            MGN S  +R S S+EL+++  PTGLY +CPW+ R VRR I+E +IAPR+PG D                              S ES                                                T+ECPICFM+Y G +N   CC KP+C+ECYLQ++PPR SV CPFCN   FS++Y  P
Sbjct:    1 MGN-SPPKRASISRELDRFTHPTGLYPSCPWDFRSVRRMILEKKIAPRFPGRD------------------------------SKESCF----------------------------------------------TQECPICFMYYPGSLNTATCCKKPICSECYLQLKPPRKSVCCPFCNREGFSIKYTAP 115          
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A7S0HBL4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HBL4_9CRYP)

HSP 1 Score: 113 bits (283), Expect = 3.790e-24
Identity = 77/225 (34.22%), Postives = 102/225 (45.33%), Query Frame = 3
Query:  156 MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPP--RSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQ 821
            MGN   SR KS      K+ KPTGLY TC W+E+ V++ I + ++APRYPG + P                                     GP                                          +ECPICF+ Y G +NR+ CC KP+CTEC+LQ + P  + ++ CPFCN   +SV+Y G  TKE+RE   AEEQ+ IEA+I A + EL RQ
Sbjct:    1 MGN-KLSRNKSVD---SKFTKPTGLYPTCEWDEKTVKKLINKKKVAPRYPGREEP-------------------------------------GP----------------------------------------DLDECPICFLWYPGGLNRSKCCKKPICTECFLQFKKPTAQKAIQCPFCNSLNYSVKYTGQMTKEEREVLEAEEQKVIEAKIRARKAELSRQ 144          
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A484DZ79_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ79_BRELC)

HSP 1 Score: 112 bits (279), Expect = 7.890e-24
Identity = 61/193 (31.61%), Postives = 82/193 (42.49%), Query Frame = 3
Query:  165 VSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKE 740
            +S+ R   G++E+EKY +PTGLY TCPWE +  RR I+E ++APR+PG +                                                                                  T ECPICFM Y G +N + CC+KP+C+ECYLQ+RPP+  + CPFCN   F V+Y  PP  E
Sbjct:   11 ISSRRLTIGTREIEKYTQPTGLYPTCPWEHKAARRLILERKLAPRFPGQEAKE----------------------------------------------------------------------------GFFTLECPICFMFYPGNLNVSSCCSKPICSECYLQIRPPQKPICCPFCNQEAFGVQYAQPPPAE 127          
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A7R9UGC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGC3_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.210e-23
Identity = 65/196 (33.16%), Postives = 82/196 (41.84%), Query Frame = 3
Query:  198 ELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHGVNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEA 785
            +LE +C+PTGLY +C W+ RVVRR I+ G++APR  G+D P+    S+S                                                                         +ECPICF +Y  VN T CC +P+CTECYLQV+PPR    CPFCN   FS  YL     ED     A+E RT  A
Sbjct:   23 QLEAFCRPTGLYPSCSWDVRVVRRAILNGKLAPRMKGTDAPA----SLS------------------------------------------------------------------------DDECPICFFYYGKVNTTTCCKQPICTECYLQVKPPREDKACPFCNRECFSATYLPKERAED-----AKEDRTAAA 137          
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: K3X652_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X652_GLOUD)

HSP 1 Score: 110 bits (274), Expect = 4.180e-23
Identity = 64/194 (32.99%), Postives = 88/194 (45.36%), Query Frame = 3
Query:  156 MGNVST--SRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGP 728
            MGN S+  SRR S ++ELEKY KPTGLY TCPWE++  RR I++ +IAPR+PG +                              + ES                                                T+ECPICFM+Y G +N + CC K +C+EC+LQ++PP+  + CPFCN   F ++Y  P
Sbjct:    1 MGNNSSTSSRRSSVTRELEKYTKPTGLYPTCPWEQKAARRMIIDRKIAPRFPGRE------------------------------AKESCF----------------------------------------------TQECPICFMYYPGNLNVSTCCKKLICSECFLQMKPPKKMICCPFCNRDTFGIKYTAP 118          
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A2P6NC34_9EUKA (RING-type domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NC34_9EUKA)

HSP 1 Score: 110 bits (275), Expect = 6.980e-23
Identity = 63/215 (29.30%), Postives = 93/215 (43.26%), Query Frame = 3
Query:  201 LEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQAKERNAR 842
            ++ Y  PTGLY+TC WE +V++R ++  +IAP YPG +  +     M                                                                          EECPICF++Y G +NRT+CC K +CTEC+ Q+R P  S  CPFCN  +FSV + GP + E++E+   E+QR +E +I    EE+ +  +  N R
Sbjct:   19 VQAYTTPTGLYQTCSWEPKVIKRLVINKKIAPLYPGKEEAALTLADMD------------------------------------------------------------------------HEECPICFLYYPGGLNRTVCCKKGICTECFFQIRKPNVSASCPFCNKMEFSVIFTGPLSNEEKEKEAQEQQRVLELKIKMRNEEIQQDIQRENDR 161          
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Match: A0A7S4JDB5_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JDB5_GUITH)

HSP 1 Score: 113 bits (283), Expect = 7.640e-23
Identity = 70/208 (33.65%), Postives = 95/208 (45.67%), Query Frame = 3
Query:  207 KYCKPTGLYETCPWEERVVRRWIMEGQIAPRYPGSDTPSFGNGSMSGXXXXXXXXXNPSVSASGVVSYESTIGTLGPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEECPICFMHYHG-VNRTICCAKPLCTECYLQVRPPRS--SVVCPFCNCTKFSVEYLGPPTKEDRERRLAEEQRTIEARIHAEQEELMRQ 821
            K+ KPTGLY TC W+E+ V++ I + ++APRYPG + P                                     GP                                          +ECPICF+ Y G +NR+ CC KP+CTEC+LQ + P +  ++ CPFCN   +SV+Y G  TKE+RE   AEEQ+ IEA+I A + EL RQ
Sbjct:   14 KFTKPTGLYPTCDWDEKTVKKLINKKKVAPRYPGREEP-------------------------------------GP----------------------------------------DLDECPICFLWYPGGLNRSKCCKKPICTECFLQFKKPNAQKAIQCPFCNSLNYSVKYTGQMTKEEREALEAEEQKVIEAKIRARKAELSRQ 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1335.2733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L120_9PHAE2.400e-12464.09RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LDS6_ECTSI7.640e-10966.37RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z3B9_9STRA1.200e-4536.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8K1C573_PYTOL3.060e-2435.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0HBL4_9CRYP3.790e-2434.22Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A484DZ79_BRELC7.890e-2431.61Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7R9UGC3_9STRA1.210e-2333.16Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
K3X652_GLOUD4.180e-2332.99RING-type domain-containing protein n=1 Tax=Globis... [more]
A0A2P6NC34_9EUKA6.980e-2329.30RING-type domain-containing protein n=1 Tax=Planop... [more]
A0A7S4JDB5_GUITH7.640e-2333.65Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1335contigH-canaliculatus_F_contig1335:14790..26854 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.9
Seed ortholog evalue2.3e-100
Seed eggNOG ortholog2880.D8LDS6
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
EggNOG free text desc.cellular response to glucose starvation
EggNOG OGsKOG2789@1,KOG2789@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons9
Model size1568
Cds size1413
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1335.2733.1prot_H-canaliculatus_F_contig1335.2733.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1335 20162..26854 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929074.1845047-UTR-H-canaliculatus_F_contig1335:14789..148711622929074.1845047-UTR-H-canaliculatus_F_contig1335:14789..14871Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1335 14790..14871 +
1696845669.8229566-UTR-H-canaliculatus_F_contig1335:14789..148711696845669.8229566-UTR-H-canaliculatus_F_contig1335:14789..14871Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1335 14790..14871 +
1622929074.1975334-UTR-H-canaliculatus_F_contig1335:20088..201611622929074.1975334-UTR-H-canaliculatus_F_contig1335:20088..20161Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1335 20089..20161 +
1696845669.8367493-UTR-H-canaliculatus_F_contig1335:20088..201611696845669.8367493-UTR-H-canaliculatus_F_contig1335:20088..20161Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1335 20089..20161 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929074.2118642-CDS-H-canaliculatus_F_contig1335:20161..202321622929074.2118642-CDS-H-canaliculatus_F_contig1335:20161..20232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 20162..20232 +
1696845669.8473222-CDS-H-canaliculatus_F_contig1335:20161..202321696845669.8473222-CDS-H-canaliculatus_F_contig1335:20161..20232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 20162..20232 +
1622929074.2233605-CDS-H-canaliculatus_F_contig1335:21138..215651622929074.2233605-CDS-H-canaliculatus_F_contig1335:21138..21565Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 21139..21565 +
1696845669.8577316-CDS-H-canaliculatus_F_contig1335:21138..215651696845669.8577316-CDS-H-canaliculatus_F_contig1335:21138..21565Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 21139..21565 +
1622929074.2333584-CDS-H-canaliculatus_F_contig1335:22848..229531622929074.2333584-CDS-H-canaliculatus_F_contig1335:22848..22953Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 22849..22953 +
1696845669.8674939-CDS-H-canaliculatus_F_contig1335:22848..229531696845669.8674939-CDS-H-canaliculatus_F_contig1335:22848..22953Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 22849..22953 +
1622929074.247435-CDS-H-canaliculatus_F_contig1335:23886..241101622929074.247435-CDS-H-canaliculatus_F_contig1335:23886..24110Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 23887..24110 +
1696845669.8886774-CDS-H-canaliculatus_F_contig1335:23886..241101696845669.8886774-CDS-H-canaliculatus_F_contig1335:23886..24110Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 23887..24110 +
1622929074.25737-CDS-H-canaliculatus_F_contig1335:24583..248351622929074.25737-CDS-H-canaliculatus_F_contig1335:24583..24835Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 24584..24835 +
1696845669.8991444-CDS-H-canaliculatus_F_contig1335:24583..248351696845669.8991444-CDS-H-canaliculatus_F_contig1335:24583..24835Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 24584..24835 +
1622929074.2699604-CDS-H-canaliculatus_F_contig1335:25903..260121622929074.2699604-CDS-H-canaliculatus_F_contig1335:25903..26012Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 25904..26012 +
1696845669.908231-CDS-H-canaliculatus_F_contig1335:25903..260121696845669.908231-CDS-H-canaliculatus_F_contig1335:25903..26012Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 25904..26012 +
1622929074.2832756-CDS-H-canaliculatus_F_contig1335:26244..263451622929074.2832756-CDS-H-canaliculatus_F_contig1335:26244..26345Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 26245..26345 +
1696845669.9191175-CDS-H-canaliculatus_F_contig1335:26244..263451696845669.9191175-CDS-H-canaliculatus_F_contig1335:26244..26345Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 26245..26345 +
1622929074.2946115-CDS-H-canaliculatus_F_contig1335:26730..268541622929074.2946115-CDS-H-canaliculatus_F_contig1335:26730..26854Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 26731..26854 +
1696845669.9289951-CDS-H-canaliculatus_F_contig1335:26730..268541696845669.9289951-CDS-H-canaliculatus_F_contig1335:26730..26854Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1335 26731..26854 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1335.2733.1

>prot_H-canaliculatus_F_contig1335.2733.1 ID=prot_H-canaliculatus_F_contig1335.2733.1|Name=mRNA_H-canaliculatus_F_contig1335.2733.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=471bp
MGNVSTSRRKSGSKELEKYCKPTGLYETCPWEERVVRRWIMEGQIAPRYP
GSDTPSFGNGSMSGGGGGGGGGGNPSVSASGVVSYESTIGTLGPGRGGGG
GGVGGGAAALGAMGGGGGGGKLVLQQQQQQQQQQQTEECPICFMHYHGVN
RTICCAKPLCTECYLQVRPPRSSVVCPFCNCTKFSVEYLGPPTKEDRERR
LAEEQRTIEARIHAEQEELMRQAKERNARETSAAAADAAADVAAAAATAS
PSLAGTGTPEGGEEGPAAKSTASSGLSSLPARASFATVAERRLTEEQIRN
QHVPGTTSSFSSSFGGGGAMGPSSGGRSSTSIPPAGGARGGGSGGSGSFL
DHALAESTAVRRQHQSRRNTRLGSSGGRRHSPLDGAGDNEGMSEFHADGI
GDGEIQQVEDLMLMEALRLSVLEEQARRERSGDMMRAATAASASASASTA
SAAAAAATASTTPASGAPTAE
back to top

mRNA from alignment at H-canaliculatus_F_contig1335:14790..26854+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1335.2733.1 ID=mRNA_H-canaliculatus_F_contig1335.2733.1|Name=mRNA_H-canaliculatus_F_contig1335.2733.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=12065bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1335:14790..26854+ (Hapterophycus canaliculatus Oshoro5f female)
ACAACAGCGGCCGCTTGGCGGATTTCGGACGAGCTCCCAAACCGGGCGTA CTCGCTCTCCAAGGCAAGCGTTTGGCACGCAGGTGAGCGCAGACAATTTG TCAATAGAGGCTTCACTTTCTGTGGCCGTGGGCGACGTCTTCGCGGCTGG GTTAGGGGTTAGGGGTCAAGCACGCCAGCAGATACACGACATGTTGCTCT TCGTCTTTTCTGCTCTCTCAAGACCCGCGAAGGCACCATGTTTCGGCACA GAGCAGCGTATCTGCGGAGCTCGCCGAGGGCTTCCCTGATTTATCCACAG TTTTACTGCTCATCGATCCTCTTCCCTAAGGGTGGTTGGTCTCAAGCTGC AGCGCAGCGCGAGAAAGACAAATAGGGGTCGGGGCGGACAGGGCACGTGG TTGATCGATGGGTACGAGTACAGTAGTACCTGTTTTTCGAGGTGCCATCC GATTTGGACGGAGATACCATGCGAGCACTCGAGCTCGAGAACGAACTCAA GCACGCAAGGTCAGCGCTTCTCCCTCGCTCTCCTGCCCGAACACCACAGC CCCATGAAGTGTCAAGCGCGAACTTCTTCCCCTCTCCGCCCGCGATACGC GAAACCACCCGTCGATACCACCAGCCTCCACAGCCAGCTCTCTGACAGCT CCAAACGCTGGCTGCTTTGCAGACCGCAACTCCCGACACCTCCTTTCACA ATCATATCGAGGCATCCGTGACTTCCACTTCAACCCGCCGCTTCGGAAGA TAACTGAAACCAGAGAGCGAGGCAAAGTGGTGAGCTGGAATGGTTCAGGA GTACGGGCCCGCACGCACTCGCCAGCAACGCGCGGGGCTGTCGCCCCATT TTGTGCGACTAGAGCGGTGCTCTGCGGAAGAACGCCCGCGATATTTCTTT CCCGGAGGCTGGCTGCAGCCGAGGAGAAACTACAGTACGGACCTTGAACG ACAGAAAAGGATCCCTCCGCATCCGCCTCGTCTGCCCCTGTTGTGTTTTT TTATTTTTTTGGATCCCATGCTCTTGTCGGCGCCCCTGTGTGCAGCACCA GACCCATAAAAACATAACATACAGAAGACGGTGCGCACGTGCCGATGCAG GGAGAAGCCTTCGGACGAGGGCATAGGGCCTTGGGAGACTCGCGGGCTAG AACCCAAGACGTGAGCAGAGATCCTTATGTGCGTCGCGTTCGAAGCGAAC TATAATAGCGACAAGGATAGCATCATGGGTGGGCTACAGACGAGACGAGA GAAAGAGGTGGATCGCGTCGTGGGTTTGAAGTCATCGGTTTCAAACTAAC GCGACACCGCCCCTCCCTCCTCCTGATCTCTGGTTCGCGACTCGCTGACG CATCTCCCCGCAGCAGCGCAGTCTGCTCGCCGCGCCCACGAATACGGCCC CTCTACAAGCACCCTGGGTGCTTTGGACTTGGAGCCTAAGACCTCATCTG ACACACCGATTACATACTACTCGTACTGAAAGTAATACTTGCAAGTGTTT CTGCCCTCTTCCCGGACACAAATCCTTTCTCCACTCCTCTACTTGTAGTC GGAGCTCCGAGAGTTCGAACACGAAGAAAACGTTAACATTCGCTTCGTGC TCTGTACACGCAAGGCAACCGCCAACTAACTCCATGCATGCACAAGCCAG TTAGTTGTCCATCGCGCCTTCCCGCTTCTTATCATCCTCGTAGTACTCCA GGAGCAGCCAGTACAGAGGCATCACGGTGCCGAGCAAAACCCACACGGGC GCCGTAACACGACACACCTCGTCCTCGATGGAGATATAACCACCCTATAC TGACAGTAGTGTGCAACAGGAAATCCAAAATTTCATTAGACACAAATGGA CCTCCTACCCAACGGGTATCGAGGACAGCAATGGTCAGCTGACCCTACCT ATGCTATGCTCCGCGAAGCTCGTCCTACCGATGAACTATGTATCACCAAG GAAATCCACGGCAACGCATCGGCGGTGTGAGATTCTGCCACGAGGTATTG GCTCGTACGAAACACGCGCGGCATCTGTCCCTCTAACTCTAAGCATTGCC GGTGGTGGCGTTGGGGTGGCTCACGTGGCATTCCAAATCTTAACAACCAA GTGAAGGTCAGTTTTCATCCAACCTCAAAATTCAAAATGCAACACGAAAC AAAACCGCCCATGGTTGGCGTATGCGGTGGAGGAAAACGCGATACGAGTT GATCGCAAACATCGGTTCATTCAACTTGGGGCTGTCGGCGACGGTGAGAC TCTGGCGCGAGAGGATCCGACGAAACAAGACCTTCAATACTGGTGGTGTT GTTGATTCTTCCATGTAAAACTTAAAATGCCCCTACATCGTACAGTACGA GTTAAATAACAGGGAAATGTTCGTGTGGATGGATAGGGTTGTGCAAGGTT CACACCGAGTAGCTCTCTTGCGACGGCACAAGGGGACAAGGGGAGGATCG TAGAACGTGTTCTGTGATTACAGGGGGAGCTGGGTATGTTTCATTTATGA TACGTATGAGTACACACCGTCAGCGGTTTAACTTCAAACTGAGATGAACC TATTTTTTGCTCGGGAGACTTGCCCGCCATAACACCGAAGAATATACTAC ATCGGTGTTGCTCTGCTTTTTTGAAAAAATACTCCGAGCATCAAACAATG AGCTCTTTTATACGCAATGACAACACGCAAATCTTGTAAACTCGTTGCCG TTCTACGCGAACTCCCAAAATCATCTTTTTCACTGTTTGCACTCAGAAGC AGGGATGGGCGATACCGGATACCGGTTATAACGGGTAATGTGGTCGATGA ATATTTAGCATGTAGGTAAAGATACATACGAAGTTGAGGAAATAGAGAAT GTAGCATGTTCGTATCTTTACATCTTTCTCGTGCAGTCTGTTGCTCTGCC CTCTGCGCCTGCACCATACAACGGCAGCTGCACCTGTGCGGGGTGGACGG TATGATACCAGCTGCATGATACGGGATACAAACGTCCTGCCATGATGCAG TTGTGGAGAGTGGAAAGGGCAGTACAAACGCTCACGCCAAGAACAAAAAC AACGCTCGACACGGAACCCCCAATGAGGGGTAACTGATACTCACGGAACC CCCGTGGTAGCGATTATAACCGGCAGGTATCATCAATCTCTGATTTGCGG TTATTACCGGTGGGTAACATAAAAAATCTGCGGTATCGCCCATCCCTTCT CAAAAGAGTGTGGATCCCAACCCCTGCTGAACCAACACGCCACCTTTCGT ATCTCGTTACAAAGTTCCATCGACCCGAACAGAGTCGTTCTCGTACCCCA AAAGTCCATCCTTCGTAGATGATAGCGAGTTGTTGTGCCCGTATGACCAC AGGTGCTTGTCCACTACCCGCGGCGCACAGCACACCACAACCGCTGTAGA GCAGTTTCCTAGAACTCTCCCGGTGGTGCTATCTACGATGGATATCCATT GGGTGGCAAGAAATGAGGTTTCCCCTCGCCCCCCTTCTCCTCACTCTTAT CTTTTCGTCTCGCTCATCTCGAGCTCGTCTCTTGGGTCGTCGTAGCTCAA TTGTCAGAGCACTCTGTCGTGTCAGAGCGACGAGGGCTCACAACCCTCCA ACGGCCCAATCACAAGAGGAGCAGTTCTAATTCGTTGGCTCACCTGTTCG GACACACGACAGAAACCGGGGAGATGGGTCTTTTGTTTTCCTTTTTCATC TGCACGGGCAAAGATCCGCCACGATCTACGAAGAAACATAGATTATATCA GCTGGCTCTTTAAGTGAAGAAGGTACTCCACCACCCAATGATGCTGCGAG CTCGACTTCCGAGCGTCTTGTCGCCATTCGCGGAAATCGGACACCAATGG AAGGCGCTGCTGGGCTTCCTCCATGTACATCAACCGGGTCATCTCTGAAG GTTCTGCGGCGACCAGATCAGAGTAGTGGCGTCGTCTTGCTCCTCCTCTC GCTCCAACGGCGGTGGGGAGTTTGGAGCAGGGTCTTGAACGGGATGGGAC TGGGGGCTGTTGACTGGCCCCTCCTCCTCCTCCTCCTCCTTCTCCTGTTG GCTGCTGTTGGCTCAGCCCTCGTAGGCGACCGGTTCCTCGGCAATCGACC TCGCGGCATCATCGGGTGGGAGCTTTGTCTCCTTCTTTATCCTTTCCTTC ATTCCTGCTACGAGAGCCACTAAAGCTTGCGTCTTGATCGAAGTCGACGC CAGTGTAAAGGGAGGTGCGAGGTTCTACAGGCTTTCCTCTATTCCCTAGA TGGGCGGTGCGGAGTACACACCGAGTACCTCCCTCTTGAGGCGGCACAAG GAAAGGGTGGTAGAACATGTTGCGTGGTAGAGGAGGGGGCTGGGTACGTG TACTCGCTCGTGCAAAGATCTCCCATTCTTGATCTACGAAGAAACATGGG CCGTACCAGCTGGCTCTATCTGACAACCCGACTCGTCCGATGACGTCACT GAGTCAAAGGTGGCATTTACATGAACGGATACTGGTAAAACACTGGCGTC GGCAAGGGAATGCAACGCCCCGTGGGAGGCATGATCACCATACCGGTTCT CGGATAGGATGAAGGATTTTTCGGAGAGAATTGCATGCCTCAAGTTGTTT TCTCTCGAGACTGTGCGCTGTTTTCCGTTCACACCTTTTTCACATTCGCT CGGGGGTGTGTCGTCCGGGTTAACCCTTCAAAGGAGACAGCACGGCTTTT GGTGCAATCAACGCATGCCCTAGCGGACAAGCGGTAAGGCATGTGTGAAG GTGCGTGTTTTTGGGGTCTTGCTACCTGGAAAATGAATGCACTTGCTCGA CCTCCATGCCTGTGTGGCGACGCTTGCCACGGCGGCATTCGTTTTGTTGC TCTGTGAGGTGAACAATTGAGGACGCACGGGTATCACACCGGTGCCTGAA GGTGTTCGCTGCTGCCCGAGGGCGTTTGCGGCCGCCTGACGGCCCGCCGT GCGACCATGTAGTCTGCCCACTCGTGGTCGGCATGAATCGGAGGCGATGC ACTCAGGAGGATATGCTTGAAAGACCGTGCACAACAGAAGGCGAAACCGC TGCTGCTGCGGTGTGCTTGCGTGGTCCTATCGGCTACTCTAAAATCTGAA CTCCCCTCTAGAAAATCATCTCTGATCATCCACGGCGCTGTCACACGGGC TGTCCGGCGCTGACCGAACACTCGCTGCCTGTCCAAGACAGACAAAACGG TATTTTCCTTTCCCACGAGCAAATACCTGCTGGACTCTGTGTGCACCTGT AACAAAAGCCGTACCAGTTAACACCCCCGTTTGCAATTTCCTTGTCCAGG AATTTTCCCGGGAAACGAGTGATTTGGGAGCGGCAGGGGAGGGGGTGACT TCTTCGTAGAGCGCGAGACGCCATGGGGAACGTCTCCACCTCTCGCCGGA AGAGTGGTAGCAAGGAGCTGGAGAAGTACTGCAAGCCTACCGGGTGCGTT GCCCTCTACTCACTTTTTTGTGGGTAGTGCTGTTGCTGTCGCTGTTGTTG GTTGTCCTTGGCCTTGTTGTGGGTAGTGCCGCTGCCGTTGAATGTGTTGT TGTTGTCGGGCCCACGAGCCTTCGTTGGCTGTTGGTTGGGTTCCTTCGTT GGACGAAGTACCCTTCCGAACTCATGTGGAAAGATAAGATTTCTAGTCCG GGCGTGTGGACGTCGATGGCAGGGTTTGACGGTGAGGTGGACAAGCTTCA GATGTGGACGTCTCGTGGGTGGATTGTTGAGGTCGTTCCGGCCCTGAAAC CCAAAGGCAAGGCGGAGGAGGCACACGTTACGTTTTGTGTTTCCGGTTCG ACGGGCGAAAGGACTAGAAAGATCAACTATCAAGTTGTTCCCGGCTGCGA AGCGTCCGAAGCTTCCGCCAAGATGAGAAAAAGATAAAATCACGCACACG GACCGGTGTCTCAGAACCTCACATCGAAGCACGTATGTCAGACGTGGTAC TAACAGTTCCTGCCTATGTCTACGTAGCTTGCGGTTCCGCCTGGAGATGG TACATTGACGGCGTTCGGCGACGAAGACCGGGCGAGTTCGGCGACGAAGA CCGGGCGCACCGGCCGGCCAGGCGCGCTTCTGCACGCGTACCCTCAGCCT CCTCTCGTACACATCTGCGTCGTGGTCTTCGTTGTCATCATCGTCGTTTT TTATGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCGCTG TCGCTATCGCTGTCGCTGTCGCTATCGCTATCGCTATCGCTGTCGCTATC GCTGTCGCTATCGCTGCCGCTATCGCTGTCGCTGCGGCTGTGGCTGTCGC TGCCGTATTGCTGACGCTGTCGTTGTCGTGTTCCCTTTGTGAAAAAAAGG CTGTACGAAACATGCCCGTGGGAAGAACGAGTCGTCCGCCGCTGGATCAT GGAAGGTCAGATTGCCCCGCGATACCCCGGCTCCGACACCCCCAGCTTCG GGAACGGTAGCATGAGCGGCGGCGGAGGGGGCGGTGGCGGCGGCGGCAAC CCAAGCGTCAGCGCTAGTGGCGTCGTGAGCTACGAGTCGACCATTGGGAC CTTGGGGCCTGGGCGGGGCGGCGGCGGCGGCGGTGTTGGAGGTGGCGCAG CAGCACTTGGGGCGATGGGAGGAGGGGGAGGAGGCGGGAAGCTTGTTCTG CAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGACTGAGGAGTGTCCGAT CTGCTTTATGCACTACCACGGGGTGAACCGCACCATATGCTGCGCGAAGC CGCTCTGCACCGAGTGTTACCTGCAGGTAGGGGTTTGCTCCGTAGAGTAA GGGTATGAAGGGGGATGGATGGGGCATGGGTGTGTCTGCAATATCCGCCT TTGATCGGCACTCGTGTTTCTGTTTCTGAGCGTCGATTTCGTGTCTCTTT GGGGACAGGCCAGAGCCGCCAACCCTCCTACCTGGCGATGCAAAACCAGT TCGTTCATGCACAAAGGGTCTCGTAGATTGCGTACGCGGATATTATGTAC CCCCCCCCCCCTCCCTCACTCCGGGCGTCGCAGACCCAGTTTTTACAGTT CCTTTGTGAAACAGCATAGCCACTTGAGTTTAGAGTTGGCTTCTCTAAAC TACTATGATTAGATTTTGCTACTCTCAACTACAAGGGGCCTCTGGTTCGC TCCATCACAGGCCAGCCAGCACCCACCGACAGCGGGTGCGAAACGGTGTC TGCTGTTGCAGCCCCGCAGAGAGTGTGATGCATCAAAGACAAGGATGGTT CTCCAACGCTCATGATCATGTCTTGAGCTCTCACTTGCAAAAAAACAGCC ACGTACGCAATCTACGAGACCCCCTGTTATGCACATGAGCAGGACACTCA TCTTCGGCGATACACGCGTTAAGTCCCCCCCTCCCCCTCCTCGACACGCT TGCGTGAGATCATTGCCTCACAGCTTTGCCTCGGCGAGCAGCTGTCCCTT CGTCTCCCTTCGTCTCCCTTCGTGGCCGCCAACAGCTAGCCACCCAGCCA CCCAGCCACCCAGCCGTCCCCCTTCTTTCTGAACATCGGCTTTCCCGCCG CTTTCTGATCTCATCTCGCAGCCGGCATGAGGAAAGAGCGGCGAGGGCGA TCGCCCACAGGCATGCATGCATGCACGCACGCACGCACGCACGCATTCAT GCTACGTTGCTCAGTAGCCCCGCCGGGTCCCACGCATTTTTCGCACGGCA ATCCCGTGCGGCCAATTCCCGCGACATACCGCCTTTCCGCCGCTTCCCGG GTGGCGGGGGACGCCGTCCCTTTGTAGTTTCGGCCTCGTGTGCACGCCGC CGCTGCCACCCTCCTTTCCTCCCTCTCTCCCCCCTTCCCTCCCCCCTTCC CTCCCCCCCTCCCCCCCTCCGTCCTTGCATGTCTCATTTCTGCCGCCTTT CTCTGTTTTCTGTTGTGTCTCGTTCTTTGCTTCACGCCAGCGTCCGATGC ACCAAGTTTCCAGATCCGCTGACAAGGAAACGAATCAATTTTTTCACAAG CGTCGCTCCTCTGCGCCCGCCCACCGCGCACCCGCGCGCTTCGCTTTGCG CCCGCCCAGGTGAGGCCACCGCGCTCGTCCGTGGTGTGCCCGTTCTGCAA CTGCACCAAGTTCTCGGTGGAGTACCTCGGACCTCCCACCAAGGAAGACC GCGAGAGGCGCCTGGTGAGACCACCGCATGCACAGGGACAGGGACATGGG CATGGGCATGGGCATGGGCATGGACATGGACATGGGTGTCGAAAGATGAT GGGCGTCGAACTAGCTGCGTAGCTTGATAAGACGACACTAGGTGCGTGAT GAGAAGACGCTACGTGAGTGATGAGAAGACAACAGGAAGAGTCAGTTTCT CGTCCCTGAAGAGGTTTCGTTTTTTCGCTGTTGTTGGCCGAACGCGAAGC TTCGGTGGGTGCCCGCCTCGGTCGGGGTGCAAGTTTCGGGGGACCCGAGG GTCTTGGAATATAGGAGAGCGCGGTGCTTCCTCGTGGTGTTGAGGCGTTC GTGTCGCACATCGTGCCGCGTGTTAGCTTTTTTTGGTTTAGTACAAGCAG TAAACAACACCAAAGTTCCGCCCTTCCTGTTGTGTTGTGGACGCCTACCT TCTTTTCGACGTGTTTCGTGAACGAAGCGGCCGGGGTGGCTTGTACGAAC ATATGCACGCACACGATGCGCGACCCGCGACGCTCAAGGCTAGCCGACGC CGAACCGGTGATTGTTTTTTTTCGCTGAAGTTTGAAATTGAATATCGTAC GACTCCGCCTTCGTGTCTTCTTTCCATCCGTGGTTGGGTTCGTTGGGCCG TTTCTATTCGATGGATTCGACTTCTGGACAGTCGGGTTGGCAGGGAGCGT TTGGGCAGACCGGCGGATGTCGGAGCGACGTCAGACGTAGGAGCGGCGGT ATCCGCATGGATGAGAGGAAGCGCAGCTTGAACAACAGCGACAGCAGCAG CAGCAAGAGCAATACCTTTAATTACGGTAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAATGTCGAT ACCACGAATAACACCGTCGATAACGACGACACCCCAAACAACGGCAGGCC GAAGAACAGCGCACGATCGAGGCCCGCATCCACGCCGAGCAGGAAGAGCT GATGCGGCAGGCGAAAGAGAGGAACGCCAGGGAGACGAGCGCGGCCGCCG CCGATGCCGCCGCCGATGTTGCTGCTGCCGCAGCCACGGCTTCTCCTTCG CTGGCCGGGACGGGTACACCCGAAGGGGGCGAGGAGGGGCCGGCCGCAAA GAGCACGGCGTCGTCTGGTTTGTCGTGAGTTTTTTTCCGTGCATAATATA ACGTTTTGCTTTTCCGGAACGAGGTGTGTCTCGTTACGACTTGGTTCTCG GCGTGCATGTGTGAGCTGCCGGGTTGTCTGTTTACCTTTCCAGCGGGTCG GGTTTTTTTTTGTCATTAATTCCGTTTGAGGGCGGAAGGTTGTCGGTTTC TGCGCTCGAGATGCCAGTGCGTGCGTGGCAATGTACGTGGGTTTTCCTCG CGGGCGTTCCTGCTGCCTTAAGCTTTTCCTTTCGTCCATCGCTCTGTTCA AGGTTTCTCGGCAGCTTCGTCGTCCTTCCACCCTGCCACGAGATGTTCAA TGGCGCAACTGAGTCCACCGTGCTGCTCACCACCACCACCACCACCACCA CCACCACCACCACCACCGACAAAAAACGGCGTTCGTCACCCCTTCTCTCG TGAAAAAACGCCTCGTTCTCGACCTCCGCCACGCTTTCCGGCAGGTCGTC GTTGCCGGCGAGAGCGTCGTTCGCGACCGTAGCGGAGCGCCGGCTAACCG AGGAGCAGATCCGAAATCAACACGTCCCGGGTACCACCTCGTCGTTCTCC TCCTCCTTCGGCGGCGGGGGCGCGATGGGGCCGTCGAGCGGCGGCAGGTC TTCGACGTCGATACCGCCGGCGGGAGGGGCGAGGGGCGGCGGCAGCGGCG GCAGCGGGTCGTTTCTGGACCACGCTCTCGCGGAGTCGACAGCTGTGTGA GTCGGCCGTTGTCGAGGGTTCGGTTCCCTTCCCTTATCACGCGTCTTTTC CCTTGTTTTTTGCGCCTCGTGAGGGTGTGGTACGTGGTGGGTGGCCTGGC ACGCGGTGTGGAGTAGTTTGTATGTCTGCCTCCCTCCCTCCCTCCCTCCC TCCCTCCCTCCCTCCCTTATCCGCGTGGCGATGTCGTTATTTCGATTTCG CGTAGGTTCAAGACCCAAGGTTCGGCTTTTCGTGGTTGTGCGTATTGTTC AGCCTTTTTGCGCAGTGTTAAACGGCGGGAGTACCGCATATGACACAAGA TGACGCACACCCTAGACCGGTTTTCAAAGCTCGGTTGCTCCGCAACAAGC TCGATTCCAACACCAAATGACATATTTTCTGGCAGATCTCGAAGAGATAT TTCCAACGCCGCCCTTTTTGGGACTGACATGCCTTTTGCTGTGGAGAACT TGGGGTTTGAAAATTTGCTTAGAAAACGTGTTACATTGCGTCATACACGG TAGACCGGCGGAACATGTTTTGCCTCTTGCTTGTCGAGACAGAACAAATG GGGAAAAAACAAGTGCATGGAACACGACGCAAGCGTGAACGGAGATCGGG AAGCAAGCAAGCATGGGGCAGGCACTGCCGTAGAGGCATTGAGGATCTTC CGACGAGTATTCGGGAGTGCCCCCGTCCCAGGAAGACGGATCAGTGAAAT GTTCCGACGATGCCACCGCGACCTACCCCCGCAGTTACTCGTAGACCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCGCCGCCGCCCCGCCCACCGCCCCGCCCTGCGGCGGNNNNNNNNNN GGATCGGTGAAAGTTTCCGCCGCCGCCACCCCGCCCCCCCCCCCCCGTTC CTCGCAGCCCCCCCCCCCCCCCCCCGGTGGCACAATGCCCTCGCCTCTCG CCCTAAACCCTGGGGATATGAAGCGTTCTTGACGATCGGCCGGATTTGCG TGCGGCGTTGCACTACGACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCGTGCACCAACAGGCGGCGCCAACACCAGAGCCGGAGAAACACTCGGCT CGGCTCTTCCGGTGGCAGGCGGCACTCTCCGCTGGACGGGGCTGGAGACA ACGAGGGCATGAGCGAGTTCCACGTGCGTATGTTTGGAATCAAAAGAGAG AACGTATCGCGCTCCTCGGTGCCGGTTTGAGGGCGTTTTGAATGTCCAAG TGATTTTGTTTCGGCCGTCGATGGGTGATCCTCCGCTGCCCCCCCCCCCG CCCCCGCGCCCCAGGATCCGCTCTCGAAACCCTCGCTCTTGGCCCGTCTT GCCTTCCTTCCCTCCCACTGGTAAAAAACTGTTCGCGTGGCCTTTCTTTC GCCAGGCGGACGGCATCGGCGATGGTGAGATCCAGCAGGTGGAAGACCTA ATGCTGATGGAGGCGCTGCGGTTGTCGGTGCTCGAGGAGCAGGCCAGGAG GGAACGGTGCGTGAGGGCCTTTGGTCCAGGCCTTTCTTACGCGTGCGTAT CGTAGGTTGTTCCCAGTGCCTTATGGTTTAAGGGTAGAGACGGGAGCAGG AGACGCGCGAGGGCAGGGGTCTCACGTGTTGTGTCAGCGCTGTCGTTTTC CTATCGTTCGCCTCCTCCGCCTCCTATCGATAGCTCTCACTGCTTCTTCT TTGCTGTGATGCTGTCGATGGTGGTGATGCTGCCGCTGCTTGTGCTCCTG CCGCCGGGGAGGGGGGGGGTCGGTATCGAGTCTTGTGACCCGCGCAGGAT CGAGTACTGCGGATTGTCCCCACATGTATTTCCGTCCATGTTGCGTGTGG ACCATTATCGCCCCCTTTTCACAACCTTTGGAATGGGCCAGGTCCGGGGA CATGATGAGGGCCGCGACCGCTGCCTCGGCCTCCGCGTCGGCCTCGACGG CTTCCGCCGCCGCAGCTGCAGCAACCGCATCCACAACCCCTGCCAGCGGT GCACCCACAGCAGAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1335:14790..26854+

>mRNA_H-canaliculatus_F_contig1335.2733.1 ID=mRNA_H-canaliculatus_F_contig1335.2733.1|Name=mRNA_H-canaliculatus_F_contig1335.2733.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2826bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1335:14790..26854+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGGGAACGTCTCCACCTCTCGCCGGAAGAGTGGTAGCAAGGAGCTGGA
GAAGTACTGCAAGCCTACCGGATGGGGAACGTCTCCACCTCTCGCCGGAA
GAGTGGTAGCAAGGAGCTGGAGAAGTACTGCAAGCCTACCGGGCTGTACG
AAACATGCCCGTGGGAAGAACGAGTCGTCCGCCGCTGGATCATGGAAGGT
CAGATTGCCCCGCGATACCCCGGCTCCGACACCCCCAGCTTCGGGAACGG
TAGCATGAGCGGCGGCGGAGGGGGCGGTGGCGGCGGCGGCAACCCAAGCG
TCAGCGCTAGTGGCGTCGTGAGCTACGAGTCGACCATTGGGACCTTGGGG
CCTGGGCGGGGCGGCGGCGGCGGCGGTGTTGGAGGTGGCGCAGCAGCACT
TGGGGCGATGGGAGGAGGGGGAGGAGGCGGGAAGCTTGTTCTGCAGCAGC
AGCAGCAGCAGCAGCAGCAACAGCAGACTGAGGAGTGTCCGATCTGCTTT
ATGCACTACCACGGGGTGAACCGCACCATATGCTGCGCGAAGCCGCTCTG
CACCGAGTGTTACCTGCAGGCTGTACGAAACATGCCCGTGGGAAGAACGA
GTCGTCCGCCGCTGGATCATGGAAGGTCAGATTGCCCCGCGATACCCCGG
CTCCGACACCCCCAGCTTCGGGAACGGTAGCATGAGCGGCGGCGGAGGGG
GCGGTGGCGGCGGCGGCAACCCAAGCGTCAGCGCTAGTGGCGTCGTGAGC
TACGAGTCGACCATTGGGACCTTGGGGCCTGGGCGGGGCGGCGGCGGCGG
CGGTGTTGGAGGTGGCGCAGCAGCACTTGGGGCGATGGGAGGAGGGGGAG
GAGGCGGGAAGCTTGTTCTGCAGCAGCAGCAGCAGCAGCAGCAGCAACAG
CAGACTGAGGAGTGTCCGATCTGCTTTATGCACTACCACGGGGTGAACCG
CACCATATGCTGCGCGAAGCCGCTCTGCACCGAGTGTTACCTGCAGGTGA
GGCCACCGCGCTCGTCCGTGGTGTGCCCGTTCTGCAACTGCACCAAGTTC
TCGGTGGAGTACCTCGGACCTCCCACCAAGGAAGACCGCGAGAGGCGCCT
GGTGAGGCCACCGCGCTCGTCCGTGGTGTGCCCGTTCTGCAACTGCACCA
AGTTCTCGGTGGAGTACCTCGGACCTCCCACCAAGGAAGACCGCGAGAGG
CGCCTGGCCGAAGAACAGCGCACGATCGAGGCCCGCATCCACGCCGAGCA
GGAAGAGCTGATGCGGCAGGCGAAAGAGAGGAACGCCAGGGAGACGAGCG
CGGCCGCCGCCGATGCCGCCGCCGATGTTGCTGCTGCCGCAGCCACGGCT
TCTCCTTCGCTGGCCGGGACGGGTACACCCGAAGGGGGCGAGGAGGGGCC
GGCCGCAAAGAGCACGGCGTCGTCTGGTTTGCCGAAGAACAGCGCACGAT
CGAGGCCCGCATCCACGCCGAGCAGGAAGAGCTGATGCGGCAGGCGAAAG
AGAGGAACGCCAGGGAGACGAGCGCGGCCGCCGCCGATGCCGCCGCCGAT
GTTGCTGCTGCCGCAGCCACGGCTTCTCCTTCGCTGGCCGGGACGGGTAC
ACCCGAAGGGGGCGAGGAGGGGCCGGCCGCAAAGAGCACGGCGTCGTCTG
GTTTGTCGTCGTTGCCGGCGAGAGCGTCGTTCGCGACCGTAGCGGAGCGC
CGGCTAACCGAGGAGCAGATCCGAAATCAACACGTCCCGGGTACCACCTC
GTCGTTCTCCTCCTCCTTCGGCGGCGGGGGCGCGATGGGGCCGTCGAGCG
GCGGCAGGTCTTCGACGTCGATACCGCCGGCGGGAGGGGCGAGGGGCGGC
GGCAGCGGCGGCAGCGGGTCGTTTCTGGACCACGCTCTCGCGGAGTCGAC
AGCTGTGTCGTCGTTGCCGGCGAGAGCGTCGTTCGCGACCGTAGCGGAGC
GCCGGCTAACCGAGGAGCAGATCCGAAATCAACACGTCCCGGGTACCACC
TCGTCGTTCTCCTCCTCCTTCGGCGGCGGGGGCGCGATGGGGCCGTCGAG
CGGCGGCAGGTCTTCGACGTCGATACCGCCGGCGGGAGGGGCGAGGGGCG
GCGGCAGCGGCGGCAGCGGGTCGTTTCTGGACCACGCTCTCGCGGAGTCG
ACAGCTGTGCGGCGCCAACACCAGAGCCGGAGAAACACTCGGCTCGGCTC
TTCCGGTGGCAGGCGGCACTCTCCGCTGGACGGGGCTGGAGACAACGAGG
GCATGAGCGAGTTCCACGCGGCGCCAACACCAGAGCCGGAGAAACACTCG
GCTCGGCTCTTCCGGTGGCAGGCGGCACTCTCCGCTGGACGGGGCTGGAG
ACAACGAGGGCATGAGCGAGTTCCACGCGGACGGCATCGGCGATGGTGAG
ATCCAGCAGGTGGAAGACCTAATGCTGATGGAGGCGCTGCGGTTGTCGGT
GCTCGAGGAGCAGGCCAGGAGGGAACGGCGGACGGCATCGGCGATGGTGA
GATCCAGCAGGTGGAAGACCTAATGCTGATGGAGGCGCTGCGGTTGTCGG
TGCTCGAGGAGCAGGCCAGGAGGGAACGGTCCGGGGACATGATGAGGGCC
GCGACCGCTGCCTCGGCCTCCGCGTCGGCCTCGACGGCTTCCGCCGCCGC
AGCTGCAGCAACCGCATCCACAACCCCTGCCAGCGGTGCACCCACAGCAG
AGGTCCGGGGACATGATGAGGGCCGCGACCGCTGCCTCGGCCTCCGCGTC
GGCCTCGACGGCTTCCGCCGCCGCAGCTGCAGCAACCGCATCCACAACCC
CTGCCAGCGGTGCACCCACAGCAGAG
back to top