mRNA_H-canaliculatus_F_contig13280.2683.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE) HSP 1 Score: 339 bits (870), Expect = 1.070e-105 Identity = 175/216 (81.02%), Postives = 184/216 (85.19%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRLTR----------AHAHTXXXXXXXG-----TVKISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETVAR 603
DASLLMSCAKDNRTLLWDLFSLKPVYELPPG G E+P +N QMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGA+TSNGRAPKWHRRPAGASFAFGGRL +A G TVKISSVKEDAAFV+ASRRFEEAMA++GFRGFCQEKE +AATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETVA+
Sbjct: 292 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGGGAELPQENAQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGASTSNGRAPKWHRRPAGASFAFGGRLVSFSATGGDAAAGNAAVGQQGATAGGGGSKTVKISSVKEDAAFVAASRRFEEAMATQGFRGFCQEKEASAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETVAK 507
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: A0A7S2XZL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL8_9STRA) HSP 1 Score: 216 bits (551), Expect = 5.500e-64 Identity = 112/208 (53.85%), Postives = 140/208 (67.31%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRLTRAHAHTXXXXXXXGT-------VKISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETVAR 603
D SL++SC KDNRTLLWDLF L+ VYELP + + +MFGG +AQRRY V+WSP+IPAVVS CSFDRKVQ++SM+GA S+GRAPKW RP GA+F FGG+L G K++ V E+ V+AS +FE+AM SK F+G+C+ K A T +E +VWQFMQVIFEKNAR LL HLGFD E +A+
Sbjct: 282 DPSLVLSCGKDNRTLLWDLFRLEAVYELPSMSKSKAAGGTGEMFGGIASSAQRRYHVAWSPNIPAVVSCCSFDRKVQVYSMSGAKASSGRAPKWLSRPVGATFGFGGKLLSFGQSGADQSSTPGAPRTGPKHFKVTQVVENPDLVAASTKFEQAMLSKNFKGYCEAKVAEAKTPYEAKVWQFMQVIFEKNARAILLCHLGFDAEAIAK 489
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: A0A7S1C338_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C338_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.170e-55 Identity = 92/200 (46.00%), Postives = 127/200 (63.50%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELP-PGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRLTRAHAHTXXXXXXXGTVKISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETV 597
DA +L++C KDNRTLLWDL+ ++ +Y++P AG E M+GG G + Q+RY V WSP + V STCSFDRKVQ S+NGA T +GR PKW +RP+G +F FGG+ A +++ V ED +AS F+ A+ S RG C K AAATAHE +VW F++++FE++AR +LL HLGFD + +
Sbjct: 4 DAGMLLTCGKDNRTLLWDLYKMESIYDIPNEDAGREPAEDARGMYGGLGSSQQKRYDVQWSPLLRGVASTCSFDRKVQCHSLNGAFTLSGRPPKWTQRPSGVAFGFGGQCVSFAADAP-------VLQVRKVVEDEPLAAASAEFDRALDSGDLRGLCASKSAAAATAHEAQVWSFLRILFEEDARAELLTHLGFDAKEI 196
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: A0A7S2R415_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R415_9STRA) HSP 1 Score: 190 bits (483), Expect = 3.530e-54 Identity = 102/203 (50.25%), Postives = 130/203 (64.04%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRL-TRAHAHTXXXXXXXGTVKISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATA---HERRVWQFMQVIFEKNARNQLLAHLGFDGETV 597
D SLL+SC KDNRT LWDL +PVYEL P FGG+G RRY+VSWSP +PAV+STCSFDRKV ++SM+G + +APKW RRP GASF FGG+L T + VK+SSV ED++ V SR FE+ M K FRG C +K AA A HE++VW+F+++IFE +AR +LL LGF+ E +
Sbjct: 282 DTSLLLSCGKDNRTFLWDLCDCRPVYELQAAPTATAPSGG---FGGFGSAFGRRYEVSWSPKLPAVLSTCSFDRKVHVYSMSGTKSQATQAPKWLRRPVGASFGFGGKLVTFSSPPGKPGQRVPQVVKVSSVVEDSSIVQVSRAFEQRMGQKDFRGICNDKAAAAEAAGDEHEKQVWEFIKLIFEDDARAKLLDKLGFNAEEI 481
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: M4B6P5_HYAAE (Sec16_C domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6P5_HYAAE) HSP 1 Score: 179 bits (454), Expect = 7.520e-49 Identity = 96/202 (47.52%), Postives = 121/202 (59.90%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRLT---RAHAHTXXXXXXXGTVKISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETV 597
D LL+SC KDNRTLLWDLFS K V ELP A + + + Q FGG QRR+ V WSP IPAV STCS D KVQ++S+ G + R PKW RRPAGASF FGG+L T V + V D V+ + + ++ +K FRG+C++K AAT ER VW FM+++FEK+AR LL HLG D E +
Sbjct: 287 DPGLLLSCGKDNRTLLWDLFSRKTVAELPSDAPDAPAMGSDQFFGGV-LAGQRRWNVQWSPQIPAVASTCSLDGKVQIWSLAGGGNPDCRPPKWMRRPAGASFGFGGKLVTIANPQEATSHNGDHRRLVHMQRVIGDTRLVAEAEALDRSLDTKDFRGYCEQKIATAATGEERSVWSFMKILFEKDARQHLLLHLGLDAEKI 487
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: A0A2P4XIT7_9STRA (Protein transporter Sec31A (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIT7_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.290e-48 Identity = 92/203 (45.32%), Postives = 121/203 (59.61%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRLTRAHAHTXXXXXXXGT----VKISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETV 597
D L++SC KDNRTLLWDLFS K V E P A P+ + Q FGG G QRR+ V WSP +PAV STC+ D KVQ++ ++G R PKW RRP GASF FGG+L A+ G + + V D V + + ++ +K F+G C++K +AATA ER VW FM+++FEK+AR LL HLG D E +
Sbjct: 286 DPGLILSCGKDNRTLLWDLFSRKTVVEFPSDAPNAPPMGSDQFFGG-GLAGQRRWNVQWSPQVPAVASTCTLDGKVQIWGLSGGGNPACRPPKWMRRPVGASFGFGGKLVTI-ANPQEPAAPNGDHRRLIHMQRVISDTGLVVEAEALDRSLETKDFKGHCEQKIASAATAEERSVWSFMKILFEKDARQHLLLHLGLDAEKI 486
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: H3GVL6_PHYRM (Sec16_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=H3GVL6_PHYRM) HSP 1 Score: 175 bits (444), Expect = 3.850e-47 Identity = 93/203 (45.81%), Postives = 122/203 (60.10%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRLTRAHAHTXXXXXXXGT----VKISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETV 597
D LL+SC KDNRTLLWDLFS K V E P A + + Q FGG G QRR+ V WSP +PAV STCS D K+Q++ ++G R PKW RRPAGASF FGG+L A+ G + + V D V+ + + ++ +K F+G C++K +AATA ER VW FM+++FEK+AR LL HLG D E +
Sbjct: 286 DPGLLLSCGKDNRTLLWDLFSRKTVAEFPSDAPNAPSMGSDQFFGG-GLAGQRRWNVQWSPQVPAVASTCSLDGKLQIWGLSGGGNPACRPPKWMRRPAGASFGFGGKLVTI-ANPQEPAAPNGDNRRLIHMQRVISDTGLVAEAEALDRSLETKDFKGHCEQKIASAATAEERSVWSFMKILFEKDARQHLLLHLGLDAEKI 486
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: A0A662WHK5_9STRA (Sec16_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHK5_9STRA) HSP 1 Score: 174 bits (441), Expect = 9.640e-47 Identity = 92/203 (45.32%), Postives = 122/203 (60.10%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRLTRAHAHTXXXXXXXGT----VKISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETV 597
D LL+SC KDNRTLLWDLFS K V E P A + + Q FGG G QRR+ V WSP +PAV STC+ D KVQ++ ++G R PKW RRPAGASF FGG+L A+ G + + V +A V+ + + ++ +K F+G C++K AA A+ER VW FM+++FEK+AR LL HLG D E +
Sbjct: 286 DPGLLLSCGKDNRTLLWDLFSRKTVVEFPSDAPNAPAMGSDQFFGG-GLAGQRRWNVQWSPQVPAVASTCTLDGKVQIWGLSGGGNPECRPPKWMRRPAGASFGFGGKLVTI-ANPQEPVAPNGDRRRLIHMHRVVSEAPLVAEAEALDRSLETKDFKGHCEQKIATAANANERSVWSFMKILFEKDARQHLLLHLGLDAEKI 486
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: A0A0P1A449_PLAHL (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A449_PLAHL) HSP 1 Score: 173 bits (439), Expect = 1.750e-46 Identity = 88/202 (43.56%), Postives = 119/202 (58.91%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRL---TRAHAHTXXXXXXXGTVKISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETV 597
D L++S KDNRTLLWDLFS K + E P P + F G G QRR+ V WSP +PAV STCS D K+Q++ ++G + R PKW RRPAGASF FGG+L T + + + V D A V+ + + ++ SK F+G+C++K +A TA ER VW FM+++FEK+AR LL HLG D E +
Sbjct: 7 DPGLILSSGKDNRTLLWDLFSRKTIIEFP-SESPNAPTMGSDHFFGGGLAGQRRWNVQWSPQVPAVASTCSLDGKLQIWGLSGGGNPDCRPPKWMRRPAGASFGFGGKLVIATNSQETLALNGDHSRLIHMQRVISDPALVAEAENLDRSLESKDFKGYCEQKIASATTAEERSVWSFMKILFEKDARQHLLLHLGLDAEKI 207
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Match: A0A421FTT1_9STRA (Sec16_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A421FTT1_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.280e-46 Identity = 91/203 (44.83%), Postives = 123/203 (60.59%), Query Frame = 1
Query: 1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYQVSWSPHIPAVVSTCSFDRKVQLFSMNGAATSNGRAPKWHRRPAGASFAFGGRLTRAHAHTXXXXXXXGTVK----ISSVKEDAAFVSASRRFEEAMASKGFRGFCQEKEDAAATAHERRVWQFMQVIFEKNARNQLLAHLGFDGETV 597
D L++SC KDNRTLLWDLFS K V E P A + + Q FGG G QRR+ V WS IPAV STC+ D K+Q++ ++G R PKW RRPAGASF FGG+L A A+ ++ + V D V+ + + ++ +K F+G+C++K AAA A+ER VW FM+++FEK+AR LL HLG D E +
Sbjct: 286 DPGLILSCGKDNRTLLWDLFSRKTVTEFPSDAPNAPAMGSDQFFGG-GLAGQRRWNVQWSAQIPAVASTCTLDGKLQIWGLSGGGNPACRPPKWMRRPAGASFGFGGKLV-AIANPQEPAGPNADIRRLIHVQRVVSDLGLVAEAEALDRSLETKDFKGYCEQKIAAAANANERSVWSFMKILFEKDARQHLLLHLGLDAEKI 486 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13280.2683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13280.2683.1 >prot_H-canaliculatus_F_contig13280.2683.1 ID=prot_H-canaliculatus_F_contig13280.2683.1|Name=mRNA_H-canaliculatus_F_contig13280.2683.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=197bp MSCAKDNRTLLWDLFSLKPVYELPPGAGEEVPVQNTQMFGGYGKTAQRRYback to top mRNA from alignment at H-canaliculatus_F_contig13280:164..1721- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13280.2683.1 ID=mRNA_H-canaliculatus_F_contig13280.2683.1|Name=mRNA_H-canaliculatus_F_contig13280.2683.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1558bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13280:164..1721- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13280:164..1721- >mRNA_H-canaliculatus_F_contig13280.2683.1 ID=mRNA_H-canaliculatus_F_contig13280.2683.1|Name=mRNA_H-canaliculatus_F_contig13280.2683.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1182bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13280:164..1721- (Hapterophycus canaliculatus Oshoro5f female)back to top |