mRNA_H-canaliculatus_F_contig132.2624.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: D7G843_ECTSI (Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G843_ECTSI) HSP 1 Score: 185 bits (469), Expect = 2.140e-52 Identity = 105/119 (88.24%), Postives = 111/119 (93.28%), Query Frame = 1
Query: 1 AGRASNVASLRMMAETAEATEEAAVEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAAD-PEYRIRIRADKDAKTLIIEDSGVGMTKDEL 354
AGR VA+LRM AETAEATEEAAVEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISN+ADACDKKRFLAVT++ DEGG+ D PEYRIR+RADKDAKTLIIEDSGVGMTKDEL
Sbjct: 73 AGR--RVAALRM-AETAEATEEAAVEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNSADACDKKRFLAVTDSGADEGGSDDDPEYRIRVRADKDAKTLIIEDSGVGMTKDEL 188
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: A0A835ZF40_9STRA (Heat shock protein 90 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF40_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.540e-35 Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 1
Query: 46 TAEATEEAAVEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAADPEYRIRIRADKDAKTLIIEDSGVGMTKDEL 354
TAEA E A EE FEFQAEV RVMDIIINSLYSNRDVFLREL+SNAADACDKKRFL++TE GD G A E+RIR++ADKDA+TL IEDSG+GMTKDEL
Sbjct: 3 TAEAEAEPATAQ-EETFEFQAEVTRVMDIIINSLYSNRDVFLRELVSNAADACDKKRFLSITE--GDGGDAT--EFRIRVKADKDARTLTIEDSGIGMTKDEL 100
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: A0A7S2IKR0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2IKR0_9DINO) HSP 1 Score: 128 bits (321), Expect = 1.190e-34 Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 1
Query: 10 ASNVASLRMMAETAEATEEAAVEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAADPE-YRIRIRADKDAKTLIIEDSGVGMTKDEL 354
AS++ + R AETA ATE G E F+FQAEVG+VMDII+NSLYSN+DVFLREL+SNAADACDKKRFLA+TE + + PE ++RIR DKDA+TLIIED+GVGM K EL
Sbjct: 4 ASSLLARRAAAETATATEA-----GVETFDFQAEVGKVMDIIVNSLYSNKDVFLRELVSNAADACDKKRFLALTEYD------SPPEPMKLRIRTDKDARTLIIEDNGVGMKKSEL 108
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: B8BY36_THAPS (Heat shock protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY36_THAPS) HSP 1 Score: 131 bits (329), Expect = 4.430e-33 Identity = 66/94 (70.21%), Postives = 79/94 (84.04%), Query Frame = 1
Query: 73 VEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAADPEYRIRIRADKDAKTLIIEDSGVGMTKDEL 354
VE+G E++EFQAEVGRVMDIIINSLYSNRDVFLREL+SN+ADACDKKRFL++T + +G + I+I+ADKDA T+ IEDSGVGMTK EL
Sbjct: 61 VEEGVEKYEFQAEVGRVMDIIINSLYSNRDVFLRELVSNSADACDKKRFLSITSSADTDGASVGDSPSIQIKADKDAMTVTIEDSGVGMTKSEL 154
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: A0A7S3MHE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHE6_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.040e-32 Identity = 66/101 (65.35%), Postives = 78/101 (77.23%), Query Frame = 1
Query: 55 ATEEAAVEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAADPE-YRIRIRADKDAKTLIIEDSGVGMTKDEL 354
ATE A E +EFQAEVG+VMDII+NSLYSN+DVFLREL+SNAADACDKKRFLA+TE++ PE ++RIR DKD + LIIED+GVGM K EL
Sbjct: 3 ATETAEAGTQVENYEFQAEVGKVMDIIVNSLYSNKDVFLRELVSNAADACDKKRFLALTESD------TPPEPMKLRIRTDKDKRLLIIEDNGVGMEKAEL 97
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: A0A7S2CEL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CEL2_9STRA) HSP 1 Score: 118 bits (295), Expect = 6.280e-32 Identity = 72/109 (66.06%), Postives = 82/109 (75.23%), Query Frame = 1
Query: 28 LRMMAETAEATEEAAVEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAADPEYRIRIRADKDAKTLIIEDSGVGMTKDEL 354
LRM TAEA AA DGE FEFQAEVGRVMDIIINSLY ++DVFLREL+SNAADACDK+RFLA+T G + I I+ADK+A TL IED+G+GMTKDEL
Sbjct: 2 LRMS--TAEADAPAA--DGE-TFEFQAEVGRVMDIIINSLYQDKDVFLRELVSNAADACDKRRFLALT------AGQPAEDINIVIKADKEANTLTIEDAGIGMTKDEL 99
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: A0A812VL78_SYMPI (HspD protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812VL78_SYMPI) HSP 1 Score: 127 bits (319), Expect = 9.830e-32 Identity = 75/111 (67.57%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 25 SLRMMAETAEATEEAAVEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAADPE-YRIRIRADKDAKTLIIEDSGVGMTKDEL 354
SL AE+AE V DGEE FEFQAEVGRVMDIIINSLYSN+DVFLREL+SNAADACDKKRFLA+TE++ A PE ++RI +KD + LIIED+GVGM KDEL
Sbjct: 53 SLARRAESAETATATEVADGEE-FEFQAEVGRVMDIIINSLYSNKDVFLRELVSNAADACDKKRFLALTESD------APPEPMKLRINTNKDDRLLIIEDNGVGMLKDEL 156
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: A0A7S0HNJ2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HNJ2_9CRYP) HSP 1 Score: 124 bits (312), Expect = 1.090e-31 Identity = 68/89 (76.40%), Postives = 76/89 (85.39%), Query Frame = 1
Query: 88 ERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAADPEYRIRIRADKDAKTLIIEDSGVGMTKDEL 354
E FEFQAEV RVMDIIINSLYS++DVFLREL+SNAADACDKKRFLA+TE +G +AD IRI+ADKD K LIIEDSGVGMTK+EL
Sbjct: 71 ETFEFQAEVSRVMDIIINSLYSDKDVFLRELVSNAADACDKKRFLAITENKG----SAD-NLEIRIQADKDQKKLIIEDSGVGMTKEEL 154
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: A0A7S4UPY7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UPY7_9DINO) HSP 1 Score: 121 bits (303), Expect = 3.000e-31 Identity = 65/96 (67.71%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 70 AVEDGEERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAADPE-YRIRIRADKDAKTLIIEDSGVGMTKDEL 354
A + E F+FQAEVG+VMDII+NSLYSN+DVFLREL+SNAADACDKKRFLA+TE++ A PE ++RIR DKDA+TL IED+GVGM K EL
Sbjct: 112 AADSAVETFDFQAEVGKVMDIIVNSLYSNKDVFLRELVSNAADACDKKRFLALTESD------APPEPMKLRIRTDKDARTLTIEDNGVGMQKAEL 201
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Match: A0A7S2XU67_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU67_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.470e-31 Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 1
Query: 88 ERFEFQAEVGRVMDIIINSLYSNRDVFLRELISNAADACDKKRFLAVTETEGDEGGAADPEYRIRIRADKDAKTLIIEDSGVGMTKDEL 354
E FEFQAEVGRVMDIIINSLYS++DVFLREL SNAADACDKKRFL++T +E D A P+ I+I+ADK+A TL IEDSGVGMTKDEL
Sbjct: 65 ETFEFQAEVGRVMDIIINSLYSDKDVFLRELTSNAADACDKKRFLSITSSEDD---ADMPKPEIKIKADKEANTLTIEDSGVGMTKDEL 150 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig132.2624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig132.2624.1 >prot_H-canaliculatus_F_contig132.2624.1 ID=prot_H-canaliculatus_F_contig132.2624.1|Name=mRNA_H-canaliculatus_F_contig132.2624.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=118bp AGRASNVASLRMMAETAEATEEAAVEDGEERFEFQAEVGRVMDIIINSLYback to top mRNA from alignment at H-canaliculatus_F_contig132:3403..4710- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig132.2624.1 ID=mRNA_H-canaliculatus_F_contig132.2624.1|Name=mRNA_H-canaliculatus_F_contig132.2624.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1308bp|location=Sequence derived from alignment at H-canaliculatus_F_contig132:3403..4710- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig132:3403..4710- >mRNA_H-canaliculatus_F_contig132.2624.1 ID=mRNA_H-canaliculatus_F_contig132.2624.1|Name=mRNA_H-canaliculatus_F_contig132.2624.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=708bp|location=Sequence derived from alignment at H-canaliculatus_F_contig132:3403..4710- (Hapterophycus canaliculatus Oshoro5f female)back to top |