prot_H-canaliculatus_F_contig12888.2405.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12888.2405.1
Unique Nameprot_H-canaliculatus_F_contig12888.2405.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length265
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12888.2405.1 vs. uniprot
Match: A0A6H5KE00_9PHAE (YTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE00_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 3.500e-30
Identity = 82/121 (67.77%), Postives = 84/121 (69.42%), Query Frame = 0 
Query:   88 MNMYAPSFQQPYNQSGGVGYGAKGSQLPHGQLQQXXXXXXXASYMNAYGDGVGGDGQTQXXXXXXXXXXXXS------SGWIDGGLRDRSGGGFSGLSAEANGFVPSNFTPASGVAGGGEV 202
            MNMY  SFQQ YNQ G   Y +K SQLPHGQLQQ        SYMN YG   GGDG  Q     XXXXXXX        GWIDGGLR+R GGGFSGLSAEANGFVPSNFTPASGVAGGGEV
Sbjct:    1 MNMYGQSFQQSYNQGG---YPSKASQLPHGQLQQPPMN---TSYMNTYGSVAGGDGSAQTQQPRXXXXXXXXXXXXXXGGWIDGGLRERGGGGFSGLSAEANGFVPSNFTPASGVAGGGEV 115
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12888.2405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KE00_9PHAE3.500e-3067.77YTH domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12888contigH-canaliculatus_F_contig12888:100..2969 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12888.2405.1mRNA_H-canaliculatus_F_contig12888.2405.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12888 100..2969 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12888.2405.1 ID=prot_H-canaliculatus_F_contig12888.2405.1|Name=mRNA_H-canaliculatus_F_contig12888.2405.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=265bp
QFSDQSADQSVDQSQGSVTTQPFNNSERVGYSNGNGSPGAGGPGYGFAGG
GLQQGGMGFGVAGGQQLQQQGYGGVGGGAYGYPQFPGMNMYAPSFQQPYN
QSGGVGYGAKGSQLPHGQLQQQQQQQQNASYMNAYGDGVGGDGQTQQQQQ
RQSSGGGGSSGWIDGGLRDRSGGGFSGLSAEANGFVPSNFTPASGVAGGG
EVVGGGMSTSPQEQRSRGPDREGRRRRRRSSPRQPRFSRRERPLGPISSA
RRASVRPTRRRPRCR
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