prot_H-canaliculatus_F_contig12870.2393.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12870.2393.1
Unique Nameprot_H-canaliculatus_F_contig12870.2393.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length359
Homology
BLAST of mRNA_H-canaliculatus_F_contig12870.2393.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 9.060e-35
Identity = 69/89 (77.53%), Postives = 74/89 (83.15%), Query Frame = 0
Query:  271 GTPAPFAPSMCSNGIPGVSADGVCCKEECGMCGGQGCGAVAGTNGASDCCPGTIVEESGGAFCGEAPCVIAGYTPSPVNPAFVGTAAPV 359
            G   P APS CSNGIPGVS   VCC E CG CGG+GCGA+AGTNGASDCCP TI EESGG FCGEAPCV+AG+TPSP+NPAF GTAAPV
Sbjct:  282 GASDPVAPSTCSNGIPGVSDGDVCCLEACGQCGGEGCGAIAGTNGASDCCPDTIKEESGGVFCGEAPCVMAGFTPSPLNPAFDGTAAPV 370          
BLAST of mRNA_H-canaliculatus_F_contig12870.2393.1 vs. uniprot
Match: A0A6H5JSA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA0_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.170e-34
Identity = 64/84 (76.19%), Postives = 69/84 (82.14%), Query Frame = 0
Query:  276 FAPSMCSNGIPGVSADGVCCKEECGMCGGQGCGAVAGTNGASDCCPGTIVEESGGAFCGEAPCVIAGYTPSPVNPAFVGTAAPV 359
             +PS CSNGIPGVS   VCC E CG CGG GCGA+AGTNGASDCCP TI EESGG FCGEAPCV+ G+TPSP+NPA  GTAAPV
Sbjct:    1 MSPSTCSNGIPGVSDGEVCCLEACGQCGGVGCGAIAGTNGASDCCPDTIKEESGGVFCGEAPCVMEGFTPSPLNPALDGTAAPV 84          
BLAST of mRNA_H-canaliculatus_F_contig12870.2393.1 vs. uniprot
Match: D7FZM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM0_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.600e-12
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 0
Query:  278 PSMCSNGIPGVSADGVCCKEECGMCGGQGCGAVAGTNGASDCCPGTIVEESGGAFCGE---APCVIAGYTPSP 347
            PS CSNG+PG      CC   CG+CGG GCG+V GT GASDCCP TI+  +    CG    APC+I   TP+P
Sbjct:    4 PSTCSNGLPGYQDGQACCLMNCGLCGGDGCGSVNGTAGASDCCPSTIINSA--RVCGGDIVAPCIIPA-TPAP 73          
BLAST of mRNA_H-canaliculatus_F_contig12870.2393.1 vs. uniprot
Match: D8LML4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML4_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.200e-10
Identity = 44/91 (48.35%), Postives = 53/91 (58.24%), Query Frame = 0
Query:  273 PAPFAPSMCSNGIPGVSADGVCCKEEC-GMCGGQGCGAVAGTNGASDCCPGTIVEESGGAFCGE-APCVIAG--YTPSPVN-PAFVGTAAP 358
            P  F  S C NGI GV    VCC EEC G+CGG+GCG++ GTNGA DCC  TI+        G  APC++    YT +P+  P F   AAP
Sbjct:    3 PPDFVASTCPNGIAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSSTILTTGVDCDVGVVAPCIMLNGTYTDAPMAAPTFPPVAAP 93          
BLAST of mRNA_H-canaliculatus_F_contig12870.2393.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.630e-10
Identity = 45/93 (48.39%), Postives = 55/93 (59.14%), Query Frame = 0
Query:  273 PAPFAPSMCSNGIPGVSADGVCCKEEC-GMCGGQGCGAVAGTNGASDCCPGTIVEESGGAFCGE---APCVIAG--YTPSPVN-PAFVGTAAP 358
            P  F  S C NG+ GV    VCC EEC G+CGG+GCG++ GTNGA DCC  TI+    G  C E   APC++    YT +P+  P F   AAP
Sbjct:  240 PPDFVASTCPNGLAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSNTILAT--GVDCEEGVMAPCIMLNGTYTDAPMAAPTFPPAAAP 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12870.2393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FZM1_ECTSI9.060e-3577.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSA0_9PHAE1.170e-3476.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZM0_ECTSI2.600e-1253.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LML4_ECTSI1.200e-1048.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7R2_9PHAE1.630e-1048.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 136..157
score: 36.36
coord: 201..226
score: 26.92
coord: 60..72
score: 35.38
coord: 165..181
score: 35.29
coord: 183..200
score: 24.44
coord: 79..95
score: 28.24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12870contigH-canaliculatus_F_contig12870:109..2619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12870.2393.1mRNA_H-canaliculatus_F_contig12870.2393.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12870 109..2619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12870.2393.1 ID=prot_H-canaliculatus_F_contig12870.2393.1|Name=mRNA_H-canaliculatus_F_contig12870.2393.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=359bp
LLPRSAAASHHAPGEAAAGTLAGQEANDVKINGAFGPLREGGLRILQEVV
ETPAPVDDADPESEAPAETPTPVVEGSDPETPAPEAGVTSVDVVPSSALI
GLVHVNTTHAPPKTFLPRSEEAALDTPTPVQEQGEDAAETPTPVLDTTTP
TPSTEEPVIVETPNPTAETEQPVAEDTPAPPTEPPMAEDTANPTAATDQP
AAEDTPNPTAEADTPTPVEQPTSTESPTSDVSPAHHGTRAPEPVLTTSQA
PRQRSDPPRPTEMPVVPEPVGTPAPFAPSMCSNGIPGVSADGVCCKEECG
MCGGQGCGAVAGTNGASDCCPGTIVEESGGAFCGEAPCVIAGYTPSPVNP
AFVGTAAPV
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