prot_H-canaliculatus_F_contig12845.2371.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12845.2371.1
Unique Nameprot_H-canaliculatus_F_contig12845.2371.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length283
Homology
BLAST of mRNA_H-canaliculatus_F_contig12845.2371.1 vs. uniprot
Match: A0A6H5KUF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF6_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 5.850e-85
Identity = 135/234 (57.69%), Postives = 170/234 (72.65%), Query Frame = 0
Query:   47 RACTVDDLVP-----QDDGDDGDDVGLSDLWDQGTLVSPPFDCTCRTLKASYHCPHLGKGGYPKWNSRLVANGTCKPKNRSEFKDEPFPPDFKILFYGNSHLRQQVVESIVCAYSEALLSRRLNIVDFVDTIARDVNVAVDPGLQCRSCVSSRKLMSDFLLENECVSEDAVEEACRCHDNEGLFLFNNGAVLHYHFAHVEDNKQVEDALRVHGTEFSDYDAVVANPGNKPNMEV 275
            RACTVDDLVP     +D G DG    LS +WD+ ++V+PPFDCTCRTLKASY CP+LG GGYPKWN+    +G C+ + RS  ++EP PP F++LFYGNSHLRQ VVE IVCAYS ++ SR L +V    ++A + +  VD  LQCR CV+S K   + LLE+EC+SE+A +EAC C DNE +F F+NGA +HYHFAH E+NK+ EDAL+  GTE+S YD VV N GN P MEV
Sbjct:   91 RACTVDDLVPPHGNYEDGGGDGG-YDLSGMWDKSSMVAPPFDCTCRTLKASYFCPNLGTGGYPKWNT----SGACERRERSALQNEPLPPAFRVLFYGNSHLRQ-VVEGIVCAYSTSIRSRCLRVVVGGGSLAPE-DALVDEDLQCRGCVNSHK-QRNMLLEHECISEEAKKEACSCDDNESVFEFDNGAAIHYHFAHKEENKRFEDALKYRGTEYSFYDVVVGNLGNDPRMEV 316          
BLAST of mRNA_H-canaliculatus_F_contig12845.2371.1 vs. uniprot
Match: D7G2P7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P7_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 4.730e-78
Identity = 124/215 (57.67%), Postives = 158/215 (73.49%), Query Frame = 0
Query:   68 LSDLWDQGTLVSPPFDCTC-------RTLKASYHCPHLGKGGYPKWNSRLVANGTCKPKNRSEFKDEPFPPDFKILFYGNSHLRQQVVESIVCAYSEALLSRRLNIVDFVDTIARDVNVAVDPGLQCRSCVSSRKLMSDFLLENECVSEDAVEEACRCHDNEGLFLFNNGAVLHYHFAHVEDNKQVEDALRVHGTEFSDYDAVVANPGNKPNMEV 275
            LS +WD+ ++V+PPFDCTC       R L ASY CP+LG GGYPKW++    +G C+ + RS  ++EP PP F++LFYGNSHLRQ VVE IVCAYS ++ SR L +V   +++A++ +  VD  LQCRSCV SRKL    LLE+EC+SEDA EEACRC D+E +F F+NGA +HYHFAH E+NK+ EDAL+  GTE+S YDAVV N GN P MEV
Sbjct:  113 LSGMWDKSSMVAPPFDCTCSGSGRAGRALNASYFCPNLGTGGYPKWST----SGGCERRERSALQNEPLPPGFRVLFYGNSHLRQ-VVEGIVCAYSSSIRSRCLRVVVDGESLAQE-DTLVDEDLQCRSCVYSRKLRRT-LLEHECISEDAKEEACRCDDDESVFEFDNGAAIHYHFAHKEENKRFEDALQYRGTEYSSYDAVVGNLGNDPRMEV 320          
BLAST of mRNA_H-canaliculatus_F_contig12845.2371.1 vs. uniprot
Match: A0A6H5KAG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG2_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 3.770e-40
Identity = 92/239 (38.49%), Postives = 125/239 (52.30%), Query Frame = 0
Query:   47 RACTVDDLVPQDDGDDGDDVGLSDLWDQGT--LVSPPFDCTCRTLKASYHCPHLGKGGYPKWNSRLVANGTCKPKNRSEFKDE--PFPPDFKILFYGNSHLRQQVVESIVCAYSEALLSRRLNIVDFVDTIARDVNVAVDPG-LQCRSCVSSRKLMSDFLLENECVSEDAVEEACRCHDNEGLFLF----NNGAVLHYHFAHVEDNKQVEDALRVHGTE-FSDYDAVVANPGNKPNMEV 275
            R CTVD+L+P           LS  W QG   +  PP+ C C   KA Y CP+LG G YP+W  R V  G C+   R E      PFPPD K+LFYGNSH+RQ  +E+I+C + + ++S+RL  V    T A +      PG   CR+C S      D LL + C+                        +NGAV+H++FA+ +++K++ DAL  H  E  S Y AV ANPGNKP++E 
Sbjct:  120 RYCTVDELLPLKKSPHS---ALSSEWSQGQGGVWKPPYGCDCAFSKARYFCPNLGSGVYPRWVPRAVTRGDCRSATREEMSSRGAPFPPDSKVLFYGNSHMRQ-TLEAILCLFQKDVVSKRLRFVSA--TNANETAYLEVPGDTPCRAC-SVWTFFKDTLLNSGCIGXXXXXXXXXXXXXXXXXXXXXXXSNGAVVHFYFANHDEDKRITDALAPHHKEDLSYYTAVFANPGNKPSVEA 351          
BLAST of mRNA_H-canaliculatus_F_contig12845.2371.1 vs. uniprot
Match: A0A835Z986_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z986_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.480e-20
Identity = 66/208 (31.73%), Postives = 91/208 (43.75%), Query Frame = 0
Query:   72 WDQGTLVSPP-FDCTCRTLKASYHCPHLGKGGYPKWNSRLVANGTCKPKNRSEFKDEPFPPDFKILFYGNSHLRQQVVESIVCAYSEALLSRRLNIVDFVDTIARDVNVAVDPGLQCRSCVSSRKLMSDFLLENECVSEDAVEEAC----RCHDNEGLFLFNNGAVLHYHFAHVEDNKQVEDALR-VHGTEFSDYDAVVANPGNKPNM 273
            W+Q T    P +DC+C   KA YHC        P W  R +  G C+    +       PP  ++LF GNSH+RQ +VES +CA+   +  R ++             V  D  + CR       L       + C  E +V         C D+   F  +NGA + Y F H E NK ++  +    GT   DYD VVAN GN P+M
Sbjct:   59 WEQRTAHQEPLYDCSCPLAKARYHCHEFNAVDGPVWVPRALVKGECRALPHNPL----VPPGARVLFAGNSHMRQ-LVESGLCAHRHEVARRNVS-----------AGVLEDISIPCRGFRLKHYL-------DGCPYEPSVLGVAPGQLECSDDRATFTLSNGATVSYVFMHREVNKTIDQFIGPTFGTSLRDYDIVVANAGNAPDM 243          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12845.2371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KUF6_9PHAE5.850e-8557.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2P7_ECTSI4.730e-7857.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAG2_9PHAE3.770e-4038.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z986_9STRA2.480e-2031.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..282
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.891

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12845contigH-canaliculatus_F_contig12845:581..3197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12845.2371.1mRNA_H-canaliculatus_F_contig12845.2371.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12845 560..3197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12845.2371.1 ID=prot_H-canaliculatus_F_contig12845.2371.1|Name=mRNA_H-canaliculatus_F_contig12845.2371.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=283bp
MSPCGVATSLLLLLLLASAVVSADADPDLEWNGKSSSGSGSGSSSRRACT
VDDLVPQDDGDDGDDVGLSDLWDQGTLVSPPFDCTCRTLKASYHCPHLGK
GGYPKWNSRLVANGTCKPKNRSEFKDEPFPPDFKILFYGNSHLRQQVVES
IVCAYSEALLSRRLNIVDFVDTIARDVNVAVDPGLQCRSCVSSRKLMSDF
LLENECVSEDAVEEACRCHDNEGLFLFNNGAVLHYHFAHVEDNKQVEDAL
RVHGTEFSDYDAVVANPGNKPNMEVKNPDACR*
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