prot_H-canaliculatus_F_contig1284.2369.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1284.2369.1
Unique Nameprot_H-canaliculatus_F_contig1284.2369.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length418
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1284.2369.1 vs. uniprot
Match: A0A6H5KMS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS2_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 3.170e-51
Identity = 168/260 (64.62%), Postives = 181/260 (69.62%), Query Frame = 0 
Query:    4 RRLPNWLGFGLLFLAQKEECLGFTASSAVQXXXXXXXXXXXXXXTGNHHAQPCSQLHRRTAGXXXXXXXXXXATTKIPTGALIPPCSAATPSSRTALRATGFGPPXXXXXXXXXXXXXXXXXXXXXXXXXHRSSGSIGSGSNTAADEGGVDGGDNSFPELNDARKVEEPRGIGTLFESEDEVIRELSSEEYLDLLRDWAPIASFASVEARDLEVKEEASRILTVLRGMAEWQPRRNADYTKLGSKWSFGAPIGAIKGGQV 263
            RR+P  L FG L L +KE C+GF A+ A Q     XXXXXXXXX                  XXXXXXXXX AT      A+         +SRTAL ATGFGP XXXXXXXXXXXXXXXXXXXXXXXXX         G          D G+  FP L DA+KVEEPRGIGTLFESEDE+IRELSSEEY +LLRDWAPIASFASVEA D +VKEEA+ ILTVLRGMAEWQP+RNADYTKLGSKWSFGAPIGAIKGGQV
Sbjct:    5 RRIPVRLVFGFLLLTRKEGCVGFVANLAAQQHPQQXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXTATRTAAHRAI---------ASRTALYATGFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDG----------DAGE-PFPRLEDAKKVEEPRGIGTLFESEDELIRELSSEEYTNLLRDWAPIASFASVEAIDTKVKEEAACILTVLRGMAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQV 238
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BLAST of mRNA_H-canaliculatus_F_contig1284.2369.1 vs. uniprot
Match: A0A0G4F895_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F895_VITBC)

HSP 1 Score: 88.2 bits (217), Expect = 2.480e-16
Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 0 
Query:  173 RGIGTLFESEDEVIRELSSEEYLDLLRDWAPIASFASVEARDLEVKEEASRILTVLRGMAEWQPRRNADYTKLGSKWSFGAPIGAIKGGQV 263
            + +GTLF+SEDE IREL S+E+LD +R WAP+++F  V   +   +EE +    VL+ MAEW+P R+  Y      W FGAP+GA KGGQ+
Sbjct:   67 QALGTLFKSEDEEIRELGSDEFLDTMRLWAPMSNFV-VNEGNASSREEGNATRLVLQQMAEWKPPRSGSYLGKTPDWRFGAPVGAFKGGQL 156
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BLAST of mRNA_H-canaliculatus_F_contig1284.2369.1 vs. uniprot
Match: D7FI60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI60_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 5.290e-11
Identity = 30/33 (90.91%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:  231 MAEWQPRRNADYTKLGSKWSFGAPIGAIKGGQV 263
            MAEWQP+RN+DYTK+GSKWSFGAPIGAIKGGQV
Sbjct:    1 MAEWQPKRNSDYTKVGSKWSFGAPIGAIKGGQV 33
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1284.2369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KMS2_9PHAE3.170e-5164.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4F895_VITBC2.480e-1648.35Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
D7FI60_ECTSI5.290e-1190.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..417
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.535

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1284contigH-canaliculatus_F_contig1284:25792..27804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1284.2369.1mRNA_H-canaliculatus_F_contig1284.2369.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1284 25752..28095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1284.2369.1 ID=prot_H-canaliculatus_F_contig1284.2369.1|Name=mRNA_H-canaliculatus_F_contig1284.2369.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=418bp
MADRRLPNWLGFGLLFLAQKEECLGFTASSAVQQQRQQQQQQRQRSHTGN
HHAQPCSQLHRRTAGAAGAAAAAPAATTKIPTGALIPPCSAATPSSRTAL
RATGFGPPPPERPRPKSSPDPTAYSPNEEEEENHRSSGSIGSGSNTAADE
GGVDGGDNSFPELNDARKVEEPRGIGTLFESEDEVIRELSSEEYLDLLRD
WAPIASFASVEARDLEVKEEASRILTVLRGMAEWQPRRNADYTKLGSKWS
FGAPIGAIKGGQVSPNSSSDPRLIYFGSFRRSMPCVPLFGFNDVVWWIAA
VMQSHVQINVPIPPLISFATRVWAWFSRLLMSELHVRNEQMRRYGTSAAS
PQARRAADQPACDLCRLGGPDPMASLYHFRRSPKSHNIAINLRRKAQSTN
RIAVEAFRTRLALRWNA*
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