prot_H-canaliculatus_F_contig12827.2358.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12827.2358.1
Unique Nameprot_H-canaliculatus_F_contig12827.2358.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length395
Homology
BLAST of mRNA_H-canaliculatus_F_contig12827.2358.1 vs. uniprot
Match: A0A6H5KUE2_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE2_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.590e-55
Identity = 188/412 (45.63%), Postives = 214/412 (51.94%), Query Frame = 0
Query:    1 VTLTCTWCSYSRRRRELYRDFSLDIPDSEAQPHHAGEGRAGSAVGGEVEGKGTRGGVFGLETLLEGFFQPSELNLLCERCGHDQVRAEHSLAELPGALVLHVKRFKPVLTSFLEAAPKPKPK-------AASPPGSSSQSPLAVGSRKPT----ETATXXXXXXXXAVVDISQDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGESSRSGGDGGSGSGSHGGVLRSYGGVSYVKLRTPVSVPLVLDLEQFCTEYTGNAPSETLGKGVDSLDGLGIPSSP-SPSCPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRARPSDDGVSVDLSMREGWSSGRQAAAAAGRGQAGDXXXXXXXXXXDEGASNKPGGALWDSTNRRS-----GGGSRGVRETATEKGRRVAK 395
             TLTCT CSYSRRRRELYRDFSLD+P+  A+                       GGV  L  LL+ FFQPSEL+L CERCGHD+VRAEHSLAELPGALVLH+KRFKPV ++     P PK K       A  P   S++SPL++            +T        A V   +D            XXXXXXXXXXXXXXXXXXXXX                      RSYGGVSYVKL +PVSVPL LDLE+FC+ YTGNAP+E LGK VDSLDGLGIP  P SPS  A                            GG  RP+D GVSVDL  REGWSS     A  G G  G             G + +  G L ++TN        G   RG+RET  E+  RVAK
Sbjct:  753 ATLTCTKCSYSRRRRELYRDFSLDVPEP-ARRXXXXXXXXXXXXXXXXXXXXXDGGVSELGDLLDNFFQPSELSLRCERCGHDRVRAEHSLAELPGALVLHIKRFKPVASAPPPQLPPPKAKVVDSSSEAKLPVAGSAESPLSLPXXXXXXXVGRPSTAPAGAFAIAGVASPEDDAGCATAVEAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYGGVSYVKLASPVSVPLELDLERFCSGYTGNAPAEDLGKQVDSLDGLGIPRVPRSPSAFASLRAAGTGLCAANRSGPNPAGG------GGEKRPTD-GVSVDLFAREGWSSTSSGQAGVGEGGGGGSVAP--------GVNRRALGPLGETTNSSXXXXGIGDRRRGIRETVAERRERVAK 1148          
BLAST of mRNA_H-canaliculatus_F_contig12827.2358.1 vs. uniprot
Match: D7G2P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P5_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.470e-45
Identity = 183/407 (44.96%), Postives = 209/407 (51.35%), Query Frame = 0
Query:    1 VTLTCTWCSYSRRRRELYRDFSLDIPDSEAQPHHAGEGRAGSAVGGEVEGKGTR-GGVFGLETLLEGFFQPSELNLLCERCGHDQVRAEHSLAELPGALVLHVKRFKPVLTSFLEAAPKPKPKAASPPGSSSQSPLAVGSRKPTETATXXXXXXXXAVVDISQDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGESSRSGGDGGSGSGSHGGVL----------RSYGGVSYVKLRTPVSVPLVLDLEQFCTEYTGNAPSETLGKGVDSLDGLGI-PSSP-SPSCPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRARPSDDGVSVDLSMREGWSSGRQAAAAAGRGQAGDXXXXXXXXXXDEGASNKPGGALWDSTNRRS-----GGGSRGVRETATEK 389
             TLTCT CSYSRRRRELYRDFSLD+P+   +                        GGV GL  LL+ FFQPSEL+L CERCGHD+VRAEHSLAELPGALVLHVKRFKP  ++                 S + SP+A           XXX     A    S  AG          XXXXXXXXXXXXXXXXXXXXX                                RSYGGVSYVKL +PVSVPL LDLE+FC+ YTGNAP+E LGK VDSLDGLGI P +P SPS  A                    XXXXXXXX      + D VSVDL  REGWSS   +  ++GR   G+            G + +  G L ++TN        G   RG+RET  E+
Sbjct:  653 ATLTCTKCSYSRRRRELYRDFSLDVPEPARRXXXXXXXXXXXXXXXXXXXXXXXDGGVSGLGDLLDSFFQPSELSLRCERCGHDRVRAEHSLAELPGALVLHVKRFKPAASAXXXXXXXXXXXXXXXXASEATSPVAGSXXXXXXXXXXXXGRSSIAPAGASATAGVPSPEDDAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYGGVSYVKLSSPVSVPLELDLERFCSGYTGNAPAEDLGKQVDSLDGLGILPRAPRSPSAFASLRAAGTGLCAAIRAAPKSAXXXXXXXXXXXXXRASDDVSVDLFAREGWSS-TSSLTSSGRDGVGEGGGGGSAAP---GVNRRALGPLGETTNSSXXXXXIGDRRRGIRETVAER 1055          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12827.2358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUE2_9PHAE1.590e-5545.63USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2P5_ECTSI1.470e-4544.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12827contigH-canaliculatus_F_contig12827:1452..3345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12827.2358.1mRNA_H-canaliculatus_F_contig12827.2358.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12827 1452..3345 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12827.2358.1 ID=prot_H-canaliculatus_F_contig12827.2358.1|Name=mRNA_H-canaliculatus_F_contig12827.2358.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=395bp
VTLTCTWCSYSRRRRELYRDFSLDIPDSEAQPHHAGEGRAGSAVGGEVEG
KGTRGGVFGLETLLEGFFQPSELNLLCERCGHDQVRAEHSLAELPGALVL
HVKRFKPVLTSFLEAAPKPKPKAASPPGSSSQSPLAVGSRKPTETATAAA
AAAAPAVVDISQDAGGGPAAPGAAAAGGGSDGGVTPPPPAIVGGGSTGES
SRSGGDGGSGSGSHGGVLRSYGGVSYVKLRTPVSVPLVLDLEQFCTEYTG
NAPSETLGKGVDSLDGLGIPSSPSPSCPAGAGAMVNATPKKTATAAARGG
GGGGGGVGGRARPSDDGVSVDLSMREGWSSGRQAAAAAGRGQAGDDDWAA
AGGDGDEGASNKPGGALWDSTNRRSGGGSRGVRETATEKGRRVAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf