prot_H-canaliculatus_F_contig12815.2350.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12815.2350.1
Unique Nameprot_H-canaliculatus_F_contig12815.2350.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length95
Homology
BLAST of mRNA_H-canaliculatus_F_contig12815.2350.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 3.440e-23
Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    2 GGTVPIQLLEFLDFLDRFHGRGAVILSDNPWMEPPESTVMEGSMAIRGYFVDLFAGPSQVQRNNLKIVVVGRASAGKTSLCRSMKAKKADPTGD 95
            GG +P QL   LD LDR  G G + L DNPW EPP S V +G  +IRGYF DL+   S+VQRN++KI++VG+  AGKTSL +SMKA  A PTG+
Sbjct:  175 GGQLPSQLCRLLDVLDRATG-GILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGE 267          
BLAST of mRNA_H-canaliculatus_F_contig12815.2350.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 2.080e-14
Identity = 35/63 (55.56%), Postives = 49/63 (77.78%), Query Frame = 0
Query:   33 MEPPESTVMEGSMAIRGYFVDLFAGPSQVQRNNLKIVVVGRASAGKTSLCRSMKAKKADPTGD 95
            ++  E  V +G+  IRGYF DLF+ P ++QRN++K+++VG+  AGKTSLCRSMKA KA PTG+
Sbjct:   27 LDGAEPIVAKGAKGIRGYFEDLFSEPCRIQRNSVKVILVGQEGAGKTSLCRSMKANKAAPTGE 89          
BLAST of mRNA_H-canaliculatus_F_contig12815.2350.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 5.750e-7
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 0
Query:   24 AVILSDNPWMEPPESTVMEGSMAIRGYFVDLF----AGPSQVQRNNLKIVVVGRASAGKTSLCRSMKAKKADPT 93
            ++ L  NPW+ PPE  V  G  A++ Y VD+     AG        LK+V+VG ASAGKTSL  S+ A +  PT
Sbjct:   25 SLYLHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPT 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12815.2350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUC9_ECTSI3.440e-2356.38LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L846_9PHAE2.080e-1455.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8T1_9PHAE5.750e-743.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.2190coord: 41..68
e-value: 5.8E-6
score: 28.3
NoneNo IPR availableGENE3D3.40.50.300coord: 69..90
e-value: 5.8E-6
score: 28.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 47..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12815contigH-canaliculatus_F_contig12815:494..1170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12815.2350.1mRNA_H-canaliculatus_F_contig12815.2350.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12815 494..1171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12815.2350.1 ID=prot_H-canaliculatus_F_contig12815.2350.1|Name=mRNA_H-canaliculatus_F_contig12815.2350.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=95bp
SGGTVPIQLLEFLDFLDRFHGRGAVILSDNPWMEPPESTVMEGSMAIRGY
FVDLFAGPSQVQRNNLKIVVVGRASAGKTSLCRSMKAKKADPTGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase