prot_H-canaliculatus_F_contig12814.2349.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12814.2349.1
Unique Nameprot_H-canaliculatus_F_contig12814.2349.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length242
Homology
BLAST of mRNA_H-canaliculatus_F_contig12814.2349.1 vs. uniprot
Match: D7FXN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN3_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 4.870e-22
Identity = 105/260 (40.38%), Postives = 134/260 (51.54%), Query Frame = 0
Query:    1 RPERPGKAKRTCPPPRTANDAFSVRSFGSSSS--SAAAAPFLNLRRAGAGS-AGGVGRGGCRFGGGTGRPLKCQRCGSDRVHLFATTATDSSRHPSLI---HPRGK-------HAGNSKKRRGSPPRGSRRTHGV--FAGSGGGYSGGCGEGGVGGGAGRLSPALVSDHPEHRSRTPQVSS---PDKVKLSGWSDTGRTVPVAAATATSPTPPFFGRRGGKNATNRAGGPQGGTPAVRSGRRASVRPPVGNGLPVPAHTP 242
            RPERPG+  RTCPPPRT +DAFSV SF SS S  S  ++P  N +RAG G+ + GVGR          RP+KCQRCGS RV LFATT   + R P+ +    PRG         AG++++  G    G  R  G   ++ +G G S  C +        RL  A VS+    R    +V+S   P +  L+G SDTGR      + A         R G +NA NR  G   G   V S R+ASVRPP G G+ +PA  P
Sbjct:  416 RPERPGQMNRTCPPPRTPSDAFSVVSFSSSGSALSPRSSPPANGQRAGGGTCSSGVGR----------RPVKCQRCGSGRVKLFATTVVSARRSPTHLLRQPPRGASSDSYCARAGHTRENAGG---GGSRNGGTPSYSVAGSGSSTSCTD--------RLRLAPVSNRHTQRGNARKVTSMLSPRRKNLAGLSDTGRISTGGVSLAEL-------RGGERNAANRPRGLMDGAAVVGS-RKASVRPPPGGGIIIPAPKP 646          
BLAST of mRNA_H-canaliculatus_F_contig12814.2349.1 vs. uniprot
Match: A0A6H5L7Q0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q0_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 1.020e-16
Identity = 102/253 (40.32%), Postives = 125/253 (49.41%), Query Frame = 0
Query:    1 RPERPGKAKRTCPPPRTANDAFSVRSFGSSSS--SAAAAPFLNLRRAGAGS-AGGVGRGGCRFGGGTGRPLKCQRCGSDRVHLFATTATDSSRHPSLIHPRGKHAGNSKKRRGSPPRGSRRTHGVFAGSGGGYSGG----CGEG-GVGGGAGRLSPALVSDHPEHRSRTPQVSS---PDKVKLSGWSDTGRTVPVAAATATSPTPPFFGRRGGKNATNRAGGPQGGTPAVRSGRRASVRPPVGNGLPVPAHTP 242
            RPERPG+  RT PPPR   DAFSV SF SS S  S  ++P  N +R G G  + GVGR          RP+KCQRCGS RV LFATT   + R P+ +  R  H+G S     +  R +R   G   G GG  +GG    C  G G      RL    VS+  + +  T  V+S   P +  L+G SDTGR                  R G +NA NR  G   G   V S R+ASVRPP G G+ +PA  P
Sbjct:  501 RPERPGQMNRTRPPPRMPRDAFSVVSFSSSGSARSPCSSPPANGQRVGGGPCSSGVGR----------RPVKCQRCGSGRVKLFATTVASARRSPTHLL-RQPHSGASSDSFCARARHTRENAG---GGGGSRNGGIPTYCDAGSGSRSSTDRLRLGPVSNRHKQQRNTHLVTSMLSPWRKNLAGLSDTGRIGTGGELLGEL-------RGGERNAANRPRGLIDGAAVVGS-RKASVRPPPGGGIIIPAPKP 731          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12814.2349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXN3_ECTSI4.870e-2240.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7Q0_9PHAE1.020e-1640.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12814contigH-canaliculatus_F_contig12814:2221..2946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12814.2349.1mRNA_H-canaliculatus_F_contig12814.2349.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12814 2221..2946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12814.2349.1 ID=prot_H-canaliculatus_F_contig12814.2349.1|Name=mRNA_H-canaliculatus_F_contig12814.2349.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=242bp
RPERPGKAKRTCPPPRTANDAFSVRSFGSSSSSAAAAPFLNLRRAGAGSA
GGVGRGGCRFGGGTGRPLKCQRCGSDRVHLFATTATDSSRHPSLIHPRGK
HAGNSKKRRGSPPRGSRRTHGVFAGSGGGYSGGCGEGGVGGGAGRLSPAL
VSDHPEHRSRTPQVSSPDKVKLSGWSDTGRTVPVAAATATSPTPPFFGRR
GGKNATNRAGGPQGGTPAVRSGRRASVRPPVGNGLPVPAHTP
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