prot_H-canaliculatus_F_contig1281.2338.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1281.2338.1
Unique Nameprot_H-canaliculatus_F_contig1281.2338.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length132
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1281.2338.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 4.970e-24
Identity = 71/135 (52.59%), Postives = 83/135 (61.48%), Query Frame = 0 
Query:    1 MGCAPSRDSASSQHAG--GCLCRGCYRGGCTSCGAV-EGQTTTAYGESSAVPLPEGAAPSGSGAPKPVLDGSDDCLWLGGGTSAKIESGSKVSEKPSKIAEEGPDDTATSVSATAVPQSKDSKLGINVVAPSGDA 132
            MGCAPSRDS+  Q      CLC GCY   C  CGA  EGQTTT+YGESSAVPLPEG   +GS   KPV+ GS D  W+GGGTS KIE+G   + KP   A            A A+   ++SK+ +NVVAPSG A
Sbjct:    1 MGCAPSRDSSRRQEPKPCSCLCNGCYPYLC--CGAPSEGQTTTSYGESSAVPLPEGGHQAGSAGDKPVMHGSHDYHWIGGGTSGKIETG--AAHKPETPAG----------GAAAMAHGEESKMDVNVVAPSGAA 121
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1281.2338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB94_ECTSI4.970e-2452.59Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1281contigH-canaliculatus_F_contig1281:646..4125 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1281.2338.1mRNA_H-canaliculatus_F_contig1281.2338.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1281 646..4594 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1281.2338.1 ID=prot_H-canaliculatus_F_contig1281.2338.1|Name=mRNA_H-canaliculatus_F_contig1281.2338.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=132bp
MGCAPSRDSASSQHAGGCLCRGCYRGGCTSCGAVEGQTTTAYGESSAVPL
PEGAAPSGSGAPKPVLDGSDDCLWLGGGTSAKIESGSKVSEKPSKIAEEG
PDDTATSVSATAVPQSKDSKLGINVVAPSGDA
back to top