prot_H-canaliculatus_F_contig127.2248.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig127.2248.1
Unique Nameprot_H-canaliculatus_F_contig127.2248.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length466
Homology
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BLAST of mRNA_H-canaliculatus_F_contig127.2248.1 vs. uniprot
Match: A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE)

HSP 1 Score: 451 bits (1159), Expect = 3.560e-152
Identity = 270/451 (59.87%), Postives = 312/451 (69.18%), Query Frame = 0 
Query:   23 EKPFRDMSRKRRNLLAWSLRAASSSDTTLARGRANEKSRPTSRASMTVPCALGSVSVDEFFNREPGSPGH-RSAGARVDVDIDTLPNLEPYRREVVAQQPITFGHRPSSASRMFNPCTMATSCGVRS-GADLNARGV-GRRAGGTISTRRGASRTHNQSNSKRRRSRDSIPHGTTGISPPMLKALLRGDA---EVRPSVATAS-HQGEIRREGFGSAGRKNTAESVATEEYLILGGQEGCSDSSVNSELVHESMWRSVDPAGGG-VRGNLEATWLTNSSREGLGQGRLELRDSVEARELKRIFSDRRPPWDGTPAPLPAPRDVRRAISSLSMPDPDERLRDKLIKSRKAAAGIPVTASSTKDERDKELERRNPTPSVRWEVCPATPRAVIARDEIRRLADSRRERDSVMAERVRKAELSVFFKKIAPSEELYRRTLQVAQGRFQHQEVLAV 465
            +KPFR+ SRK+RNLLAWS+RAAS+SD   A+  AN+   PT R S TV   L    + EFFN E G  G       RV+VD+DTLP LEPYRREVVAQQPITFGHRP SASRMFNPCTMATSCG+ S G   +  G+ GR+ GG            +       R R+S P  TTG+S PMLKALLRGD    E   ++ TAS HQ E+    F   G   + +S     YL+L GQE  +DSSVNSE + ES WRSVD  G G   G LE+ WL  SS  GLG GR  L ++ E +EL RIFS  RPPWDG PAPLPAP+  RRAISSL MPDPDERLRDKLIKSRKAAAG+PVTASSTKDER++EL   NPTP  RWEVCPATPRAVIAR EIRRL++ R ERD  MA++VR+AELSV FKKIAPSE+LYR TLQ+AQ RF+HQ   A+
Sbjct:   57 KKPFREFSRKKRNLLAWSIRAASASDAA-AQSTANKTHMPTRRLSTTVRSDLDGTDIGEFFNMERGMSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRKKGGG----------GHXXXXXXXRGRNSKPRRTTGLSAPMLKALLRGDTPTGEGGAALVTASQHQQEL----FEPNGNIVSRDSAPKPNYLVLDGQEDLTDSSVNSEKLDESKWRSVDDLGRGEALGELES-WLQTSSHSGLGHGRRRLGNTKEGQELHRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFNPTPIGRWEVCPATPRAVIARQEIRRLSELREERDRAMAKKVRQAELSVLFKKIAPSEKLYRNTLQIAQERFRHQGTAAI 491
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig127.2248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2S4_9PHAE3.560e-15259.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig127contigH-canaliculatus_F_contig127:22003..24720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig127.2248.1mRNA_H-canaliculatus_F_contig127.2248.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig127 22003..24720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig127.2248.1 ID=prot_H-canaliculatus_F_contig127.2248.1|Name=mRNA_H-canaliculatus_F_contig127.2248.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=466bp
NPSLVHLTSADVPRTASFMVDAEKPFRDMSRKRRNLLAWSLRAASSSDTT
LARGRANEKSRPTSRASMTVPCALGSVSVDEFFNREPGSPGHRSAGARVD
VDIDTLPNLEPYRREVVAQQPITFGHRPSSASRMFNPCTMATSCGVRSGA
DLNARGVGRRAGGTISTRRGASRTHNQSNSKRRRSRDSIPHGTTGISPPM
LKALLRGDAEVRPSVATASHQGEIRREGFGSAGRKNTAESVATEEYLILG
GQEGCSDSSVNSELVHESMWRSVDPAGGGVRGNLEATWLTNSSREGLGQG
RLELRDSVEARELKRIFSDRRPPWDGTPAPLPAPRDVRRAISSLSMPDPD
ERLRDKLIKSRKAAAGIPVTASSTKDERDKELERRNPTPSVRWEVCPATP
RAVIARDEIRRLADSRRERDSVMAERVRKAELSVFFKKIAPSEELYRRTL
QVAQGRFQHQEVLAV*
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