mRNA_H-canaliculatus_F_contig12415.2050.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: D7G664_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G664_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.060e-24 Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLLNVETIMASYRTL---------------------IRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELR 279
K+RMLGNIQFIGELYKK +L E+V K C+E LLN + +A+ RTL IRTIG TLDT++NTLYM+E+FRLM IA N+ + +R+RFM++DL ELR
Sbjct: 21 KRRMLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKEVATDRTLKALKFKNMDVDEDNLEALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKSINSRMRFMIRDLEELR 134
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: A0A6H5KBU9_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU9_9PHAE) HSP 1 Score: 103 bits (256), Expect = 1.410e-23 Identity = 59/114 (51.75%), Postives = 75/114 (65.79%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLLNVETIMASYRTL---------------------IRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELR 279
K+RMLGNIQFIGELYKK +L E+V K C+E LLN + + + RTL IRTIG TLDT++NTLYM E+FRLM IA N+ + +R+RFM++DL ELR
Sbjct: 577 KRRMLGNIQFIGELYKKSMLKENVMKTCVEHLLNAKKEVGADRTLKALKFKNGDVDEDNLEALGKLIRTIGSTLDTSKNTLYMTEIFRLMDKIANNKSINSRMRFMIRDLEELR 690
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: A0A7S3WM56_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WM56_EMIHU) HSP 1 Score: 75.9 bits (185), Expect = 3.740e-14 Identity = 45/101 (44.55%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLLNV-----ETIMASYRTLIRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELRVSG 288
KKRMLGNI+FIGELYK+++L E + ECL LL E + L+ TIG +D AR ++ E F M +A NE++ R+RFMLQ++ +LR G
Sbjct: 208 KKRMLGNIRFIGELYKQKMLTEKIMHECLIKLLGDIEKPDEDEVECLCKLMTTIGSLIDHARAKSHLDEYFTRMKSMANNEKLAIRMRFMLQEVIDLRRGG 308
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: A0A7S3WKT2_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WKT2_EMIHU) HSP 1 Score: 74.3 bits (181), Expect = 1.640e-13 Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLLNV-----ETIMASYRTLIRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELRVSG 288
KKRMLGNI+FIGELYK+++L E + ECL LL E + L+ TIG +D AR ++ E F M +A NE++ R+RFML+++ +LR G
Sbjct: 154 KKRMLGNIRFIGELYKQKMLTEKIMHECLIKLLGDIEKPDEDEVECLCKLMTTIGSLIDHARAKSHLDEYFTRMKSMANNEKLAIRMRFMLREVIDLRRDG 254
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: A0A7S0Q669_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q669_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 1.770e-13 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLLN-----VETIMASYRTLIRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELR 279
K+RMLGNI+FIGELYK+R+L E + ECL LL E + L+ TIG +D + +M E F M +++ N + NR+RFMLQ++ +LR
Sbjct: 182 KRRMLGNIRFIGELYKQRMLTEKIMHECLIKLLGDIEQPEEEAVECLCKLMTTIGKDIDHPKAKSHMDEYFTRMKEMSSNPNLVNRLRFMLQEVIDLR 279
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: A0A388KJ91_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJ91_CHABU) HSP 1 Score: 74.3 bits (181), Expect = 1.990e-13 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLL-----NVETIMASYRTLIRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELRVSG 288
++RMLGNI+FIGEL+KK++L E + EC++ LL + E + S L+ TIG TLD + +M F+ M + N+++ +RIRFM+ D+ ELR +G
Sbjct: 3357 RRRMLGNIRFIGELFKKQMLTEKIMHECIKKLLGDIENSEEEDIESLCKLLTTIGHTLDHPKAHQHMDSYFKRMERLTTNQKLSSRIRFMVLDVIELRDNG 3457
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: A0A7J8QS48_GOSRA (MI domain-containing protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8QS48_GOSRA) HSP 1 Score: 73.6 bits (179), Expect = 3.460e-13 Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLL------NVETIMASYRTLIRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELR 279
++RMLGNI+FIGELYKK++L E + EC++ LL + E I A + L+ TIG +D + +YM F MA ++ N ++ +R+RFML+D +LR
Sbjct: 46 RRRMLGNIRFIGELYKKKMLTERIMHECIKKLLGEYENPDEEDIEALCK-LMSTIGEMIDYPKAKVYMDAYFERMAKLSNNVKLSSRVRFMLKDAIDLR 143
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: A0A397I5M8_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397I5M8_9GLOM) HSP 1 Score: 73.6 bits (179), Expect = 3.590e-13 Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLLNV--------ETIMASYRTLIRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELR 279
K+R LG I+FIGEL+K ++ E + EC++ LL V E + S TL+ TIG LD + +M F M DI+ N ++ NRIRFMLQD+ ELR
Sbjct: 469 KRRGLGLIRFIGELFKLNMITERIIHECIKKLLTVSSNHETPEEEEIESLCTLLNTIGQQLDHNKAKTHMDAYFNQMGDISRNPKISNRIRFMLQDVIELR 569
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: A0A6A2XE16_HIBSY (Eukaryotic translation initiation factor 4G n=3 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XE16_HIBSY) HSP 1 Score: 73.6 bits (179), Expect = 3.650e-13 Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLLNV-----ETIMASYRTLIRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELR 279
++RMLGNI+ IGELYKK++L E + EC++ LL E + + L+ TIG +D + YM F +MA +A N ++ +R+RFML+D +LR
Sbjct: 1301 RRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGEYENPDEEDVEALCKLMSTIGEMIDHPKAKAYMDNYFEMMAKLANNMKLSSRVRFMLKDAIDLR 1398
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Match: A0A7S4BQ61_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BQ61_CHRCT) HSP 1 Score: 73.2 bits (178), Expect = 3.940e-13 Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 1 KKRMLGNIQFIGELYKKRLLNESVTKECLETLLN-----VETIMASYRTLIRTIGPTLDTARNTLYMRELFRLMADIAGNERVCNRIRFMLQDLAELRVSG 288
K+RMLGNI+FIGELYK+++L E + ECL LL E + L+ TIG ++D + +M E F M +++ N + NR+RFMLQ++ +LR G
Sbjct: 232 KRRMLGNIRFIGELYKQKMLAEKIMHECLIKLLGDIEHPEEESVECLCKLMTTIGQSIDHEKARSHMDEYFTRMKELSTNPALANRLRFMLQEVIDLRRGG 332 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12415.2050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12415.2050.1 >prot_H-canaliculatus_F_contig12415.2050.1 ID=prot_H-canaliculatus_F_contig12415.2050.1|Name=mRNA_H-canaliculatus_F_contig12415.2050.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=93bp MLGNIQFIGELYKKRLLNESVTKECLETLLNVETIMASYRTLIRTIGPTLback to top mRNA from alignment at H-canaliculatus_F_contig12415:799..1751- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12415.2050.1 ID=mRNA_H-canaliculatus_F_contig12415.2050.1|Name=mRNA_H-canaliculatus_F_contig12415.2050.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=953bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12415:799..1751- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12415:799..1751- >mRNA_H-canaliculatus_F_contig12415.2050.1 ID=mRNA_H-canaliculatus_F_contig12415.2050.1|Name=mRNA_H-canaliculatus_F_contig12415.2050.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=558bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12415:799..1751- (Hapterophycus canaliculatus Oshoro5f female)back to top |