mRNA_H-canaliculatus_F_contig12221.1910.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12221.1910.1 vs. uniprot
Match: A0A6H5JWF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF8_9PHAE) HSP 1 Score: 192 bits (489), Expect = 8.440e-55 Identity = 111/241 (46.06%), Postives = 150/241 (62.24%), Query Frame = 3
Query: 3 PELSGLEEEVANRNVKWRGLSLIFADAAFYEFVLSLESGYYHSLKNPALLAMYFGDLPKKFLEVVSSSVTVRVKFQRCVDSVEVRGEHGQALSNSRRFIGLFHFFMSKWHNMRMSDFAKRLTKV*TIIKE--DKKA-----RGALGDQLNTSSNQALRDKVGPGKTKRDTKTPPSPTIRQMERRVELAGMIGSHTFSKLRAKDLKEYIKEYGGAFQSKSNVRELRSILKGIAPGIGVDEEP 704
P L GLE EV RNVKWRGLSLIFADA+F+EFV +LE GY H+LK PAL A Y GDLP K LEVVSS+ V++ F+RCVDS+ G + R + LF FF+ KWHNMRM+D+ K+L+ ++K+ DK A +GAL ++L + N+ K G + +T+ P +P + ++RV+LA IGS F +L +L IK GG + LRS+L+ IAPG+G D +P
Sbjct: 118 PGLKGLEREVDRRNVKWRGLSLIFADASFFEFVYTLEDGYLHALKQPALFATYQGDLPAKILEVVSSATPVKMAFRRCVDSIRKEAGKGVVM---RSYGVLFDFFLLKWHNMRMADYVKKLSNAQKVVKQRKDKSAEKGGDKGALRERLKSMVNK----KTG---VRTETRKPTTP---ERQKRVDLADSIGSRDFMRLTKGELGSRIKACGGVVSGRERQYGLRSMLRAIAPGVGEDVDP 345
BLAST of mRNA_H-canaliculatus_F_contig12221.1910.1 vs. uniprot
Match: A0A6H5KPL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPL9_9PHAE) HSP 1 Score: 191 bits (486), Expect = 3.030e-53 Identity = 111/241 (46.06%), Postives = 150/241 (62.24%), Query Frame = 3
Query: 3 PELSGLEEEVANRNVKWRGLSLIFADAAFYEFVLSLESGYYHSLKNPALLAMYFGDLPKKFLEVVSSSVTVRVKFQRCVDSVEVRGEHGQALSNSRRFIGLFHFFMSKWHNMRMSDFAKRLTKV*TIIKE--DKKA-----RGALGDQLNTSSNQALRDKVGPGKTKRDTKTPPSPTIRQMERRVELAGMIGSHTFSKLRAKDLKEYIKEYGGAFQSKSNVRELRSILKGIAPGIGVDEEP 704
P L GLE EV RNVKWRGLSLIFADA+F+EFV +LE GY H+LK PAL A Y GDLP K LEVVSS+ V++ F+RCVDS+ G + R + LF FF+ KWHNMRM+D+AK+L+ ++++ DK A +GAL D+L + N+ K G + +T+ P +P + ++RV+LA IG F +L +L IK GG + +LRS+L+ IAPG G D +P
Sbjct: 227 PGLKGLEREVDRRNVKWRGLSLIFADASFFEFVYTLEDGYLHALKQPALFATYQGDLPAKILEVVSSATPVKMAFRRCVDSIRKEAGKGVVM---RSYGVLFDFFLLKWHNMRMADYAKKLSNAQKVVEQRKDKSAEKGGDKGALRDRLKSMVNK----KTG---VRTETRKPTTP---ERQKRVDLADSIGFRDFMRLTKGELASRIKACGGVVSGRERQYDLRSMLRAIAPGEGEDVDP 454
BLAST of mRNA_H-canaliculatus_F_contig12221.1910.1 vs. uniprot
Match: A0A6H5K2P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P3_9PHAE) HSP 1 Score: 144 bits (363), Expect = 4.580e-37 Identity = 80/155 (51.61%), Postives = 105/155 (67.74%), Query Frame = 3
Query: 3 PELSGLEEEVANRNVKWRGLSLIFADAAFYEFVLSLESGYYHSLKNPALLAMYFGDLPKKFLEVVSSSVTVRVKFQRCVDSVEVRGEHGQALSNSRRFIGLFHFFMSKWHNMRMSDFAKRLTKV*TIIKE--DKKA-----RGALGDQLNTSSNQ 446
P L GLE EV RNVKWRGLSLI ADA+F+EFV +LE GY H+LK PAL A Y GDLP K LEVVSS+ V++ F+RCVDS+ R E G+ + R + LF + KWHNM M+D+AK+L+ ++K+ DK A +GAL ++L + N+
Sbjct: 130 PGLKGLEREVDRRNVKWRGLSLIVADASFFEFVYTLEDGYLHALKQPALFATYQGDLPAKILEVVSSATPVKMAFRRCVDSI--RKEAGKGIV-MRSYGVLFDLNILKWHNMLMADYAKKLSNAQKVVKQRKDKSAEKGGDKGALRERLKSMVNK 281
BLAST of mRNA_H-canaliculatus_F_contig12221.1910.1 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 1.210e-12 Identity = 50/157 (31.85%), Postives = 77/157 (49.04%), Query Frame = 3
Query: 3 PELSGLEEEVANRNVKWRGLSLIFADAAFYEFVLSLESGYYHSLKNPALLAMYFGDLPKKFLEVVSSSVTVRVKFQRCVDSVEVRGEHGQALSNSRRFIGLFHFFMSKWHNMRMSDFAKRLTKV*TIIKEDKKARGALGDQLNTSSNQALRDKVGPG 473
P L + EV RN G L+F A+YEFV +E+G YH L++P L Y GDL + L VV+ S VR + +C S + ++ F + K+HN+RM DFA+RL++ T+ + ++G L + N + A + G
Sbjct: 188 PILQDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHVENGIYHFLRDPYFLGTYLGDLSAEILRVVTESSEVRRAWAKCCPSAVAPPPFE---AQPEILDDIYKFVLQKFHNVRMGDFARRLSQNSTL----RLSKGELALRQNLRATSAKGEATAKG 337
BLAST of mRNA_H-canaliculatus_F_contig12221.1910.1 vs. uniprot
Match: A0A6H5K7M3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M3_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 9.380e-10 Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 3
Query: 6 ELSGLEEEVANRNVKWRGLSLIFADAAFYEFVLSLESGYYHSLKNPALLAMYFGDLPKKFLEVVSSSVTVRVKFQRCVDSVE 251
EL G+ EEV RN R L+F + F + +L+LESGY+H L PA L Y G+LP++ L +VS S TV+ + C + E
Sbjct: 259 ELRGVTEEVQRRNDPTRPRGLVFVTSLFLKLLLTLESGYFHVLSQPAFLGSYLGNLPEEILRLVSESPTVQRAWDACCQARE 340 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12221.1910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12221.1910.1 >prot_H-canaliculatus_F_contig12221.1910.1 ID=prot_H-canaliculatus_F_contig12221.1910.1|Name=mRNA_H-canaliculatus_F_contig12221.1910.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=74bp MYFGDLPKKFLEVVSSSVTVRVKFQRCVDSVEVRGEHGQALSNSRRFIGLback to top mRNA from alignment at H-canaliculatus_F_contig12221:40..1089+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12221.1910.1 ID=mRNA_H-canaliculatus_F_contig12221.1910.1|Name=mRNA_H-canaliculatus_F_contig12221.1910.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1050bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12221:40..1089+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12221:40..1089+ >mRNA_H-canaliculatus_F_contig12221.1910.1 ID=mRNA_H-canaliculatus_F_contig12221.1910.1|Name=mRNA_H-canaliculatus_F_contig12221.1910.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=444bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12221:40..1089+ (Hapterophycus canaliculatus Oshoro5f female)back to top |