prot_H-canaliculatus_F_contig10.17.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10.17.1
Unique Nameprot_H-canaliculatus_F_contig10.17.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length1157
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10.17.1 vs. uniprot
Match: D7G539_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G539_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 5.210e-57
Identity = 124/240 (51.67%), Postives = 143/240 (59.58%), Query Frame = 0 
Query:  844 LWRDSGFGRVTELILEGLPQGIAEACQPMMEGFQRQLSIALGCNAAGEMSLMIDQPCRKQVIMRDALMGLGTMAILCGDDCGGCVFYERAAQCCRSLGDWIGMANALAAKARLYMATGCLAEAGRGFELVLKLAYELNDDILAASAHSFQGWVMASQKDVEEALSHFRQCRNLSFRNQDDSAAAASELGIAHMHLRRATTSQGGDDHGGVYSNARQTGIAPALEIASHMELVAARRHYMR 1083
            LWR+SG GRVTEL  EG+  G+ E C+P+ E  +RQL+IA+ C +  E S    +  RKQVI RDALMGLGTMA LCGDD G    YERA QCCR+ GDWIG+A+ALAAKA L  A G   EA  GF+LVLKLA EL DD LAASAHS  GW MAS+                                IAHMH+R A    G  D   V  +  QT   PALE++SH ELV ARRHY R
Sbjct:    7 LWRESGVGRVTELTAEGVLHGMGETCRPVTEYLRRQLAIAMACESTEESSP--PKSPRKQVIARDALMGLGTMATLCGDDRGARDLYERAVQCCRASGDWIGLAHALAAKAHLQAAAGRFEEAVGGFKLVLKLACELRDDALAASAHSCLGWAMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIAHMHVRLAIVLSGDGDQA-VCHDTPQTDPNPALELSSHAELVGARRHYSR 243
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10.17.1 vs. uniprot
Match: D7G540_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G540_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.730e-18
Identity = 67/146 (45.89%), Postives = 88/146 (60.27%), Query Frame = 0 
Query:    1 KAKAHQLQVTDTIVRILGRIRPEEPRPIAEPSQL-STSGELAEEDVNVDADVDDVEEGDGNEVVSASDTSSDAWTGGTGVVH---SPILKPEDYTTLPSTHPAQQLLKTGKGLVRLKRPEQAVVVWSQAAEIFRSVIKVDPRQSLT 142
            KAKA QL++++T+VRILG+I P+   P   P+Q   TSG  AE+ V VD   +D      NEV S+S                  +P + P+D+TTL S HP+QQLLK GK L+R KRPEQAVVVW QAAEI R+ I+   + + T
Sbjct:  205 KAKAQQLRISNTVVRILGQIHPDNV-PSRPPTQRPDTSGASAEDRVEVDGTKEDE-----NEVASSSSXXXXXXXXXXXXXXXXPAPTVTPDDFTTLASDHPSQQLLKAGKELMRQKRPEQAVVVWGQAAEILRNTIEDSSKPATT 344
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G539_ECTSI5.210e-5751.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G540_ECTSI1.730e-1845.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 513..533
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 947..980
e-value: 240.0
score: 2.8
coord: 987..1020
e-value: 94.0
score: 6.4
coord: 500..533
e-value: 10.0
score: 15.0
coord: 99..132
e-value: 130.0
score: 5.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 987..1020
score: 6.667
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 500..533
score: 8.467
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 500..533
score: 8.621
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 92..215
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 929..1040

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10contigH-canaliculatus_F_contig10:40105..49767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10.17.1mRNA_H-canaliculatus_F_contig10.17.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10 40105..49767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10.17.1 ID=prot_H-canaliculatus_F_contig10.17.1|Name=mRNA_H-canaliculatus_F_contig10.17.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1157bp
KAKAHQLQVTDTIVRILGRIRPEEPRPIAEPSQLSTSGELAEEDVNVDAD
VDDVEEGDGNEVVSASDTSSDAWTGGTGVVHSPILKPEDYTTLPSTHPAQ
QLLKTGKGLVRLKRPEQAVVVWSQAAEIFRSVIKVDPRQSLTVLLQLSRI
LEKLGRFKDMPPLLLEATESAGTIASWQERNRLLRNRRLEVTVMGKLGFC
FIKTEKLERALDVFRGMEKRLRGEEIEHTGLKDGGWHRSRAKVKEAARQE
EPQLMTREDLELAWQARRGLSTALVGLGRGKEALAEAVEAMDLAEQLAEP
AMRAECEGLLGRAWRSVAAQTREENRRQQACMAFDALYGQEKDDNEQESE
DDDSSEETSSDECEDGDGDDVSPSLSATGSHKSKEEVSSSIPESEHRRYE
TRENQPASDVADDLGTKTDYDREGINASERQAAGCFKRQVALLRGLNRSS
NPIPPLEPELDFTVRDDGLSTSPTSRTKGSQAKTCKGMQTIEEYAHISEV
EALLELGKTLLSLEEVESAVMAFQRRLRLIERRFSRCSTTCDDTSRGQSS
MLGAATKPSTSPNSTKCRVPPRTADSLKFNSRVTVGLCDPMAAPRGTQAV
QPEEDSARGAVTNAANIEKEELSSLDVAEALWWLIVSTSQQHLGVNLASS
PRFLPFNVRPRRPSDCGRGKAYTNERYARHPGGRSVHRKCLALTNAVGRA
PARPAPRCDNIEKKPIHVRPRTSTCREDCASCPSCSCNRRFVSLPSAAHS
TIDSFSNFKAKASPGTNQKDGMSHNSTKRAKKRLPSPCGESRWGNRMVRD
DGEAEKVGGATGGEPSSAPGAMDPVGTDWPAEEAPEGVGRVGPLWRDSGF
GRVTELILEGLPQGIAEACQPMMEGFQRQLSIALGCNAAGEMSLMIDQPC
RKQVIMRDALMGLGTMAILCGDDCGGCVFYERAAQCCRSLGDWIGMANAL
AAKARLYMATGCLAEAGRGFELVLKLAYELNDDILAASAHSFQGWVMASQ
KDVEEALSHFRQCRNLSFRNQDDSAAAASELGIAHMHLRRATTSQGGDDH
GGVYSNARQTGIAPALEIASHMELVAARRHYMRYLRWTQARDASGVSHAH
TCLARMYRAMEDEESCEHHRQAALQGSHGPRDTDDQFWKMRALEHEEVVR
GMLELS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat