Homology
BLAST of mRNA_H-canaliculatus_F_contig10.17.1 vs. uniprot
Match:
D7G539_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G539_ECTSI)
HSP 1 Score: 207 bits (527), Expect = 5.210e-57
Identity = 124/240 (51.67%), Postives = 143/240 (59.58%), Query Frame = 0
Query: 844 LWRDSGFGRVTELILEGLPQGIAEACQPMMEGFQRQLSIALGCNAAGEMSLMIDQPCRKQVIMRDALMGLGTMAILCGDDCGGCVFYERAAQCCRSLGDWIGMANALAAKARLYMATGCLAEAGRGFELVLKLAYELNDDILAASAHSFQGWVMASQKDVEEALSHFRQCRNLSFRNQDDSAAAASELGIAHMHLRRATTSQGGDDHGGVYSNARQTGIAPALEIASHMELVAARRHYMR 1083
LWR+SG GRVTEL EG+ G+ E C+P+ E +RQL+IA+ C + E S + RKQVI RDALMGLGTMA LCGDD G YERA QCCR+ GDWIG+A+ALAAKA L A G EA GF+LVLKLA EL DD LAASAHS GW MAS+ IAHMH+R A G D V + QT PALE++SH ELV ARRHY R
Sbjct: 7 LWRESGVGRVTELTAEGVLHGMGETCRPVTEYLRRQLAIAMACESTEESSP--PKSPRKQVIARDALMGLGTMATLCGDDRGARDLYERAVQCCRASGDWIGLAHALAAKAHLQAAAGRFEEAVGGFKLVLKLACELRDDALAASAHSCLGWAMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIAHMHVRLAIVLSGDGDQA-VCHDTPQTDPNPALELSSHAELVGARRHYSR 243
BLAST of mRNA_H-canaliculatus_F_contig10.17.1 vs. uniprot
Match:
D7G540_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G540_ECTSI)
HSP 1 Score: 99.8 bits (247), Expect = 1.730e-18
Identity = 67/146 (45.89%), Postives = 88/146 (60.27%), Query Frame = 0
Query: 1 KAKAHQLQVTDTIVRILGRIRPEEPRPIAEPSQL-STSGELAEEDVNVDADVDDVEEGDGNEVVSASDTSSDAWTGGTGVVH---SPILKPEDYTTLPSTHPAQQLLKTGKGLVRLKRPEQAVVVWSQAAEIFRSVIKVDPRQSLT 142
KAKA QL++++T+VRILG+I P+ P P+Q TSG AE+ V VD +D NEV S+S +P + P+D+TTL S HP+QQLLK GK L+R KRPEQAVVVW QAAEI R+ I+ + + T
Sbjct: 205 KAKAQQLRISNTVVRILGQIHPDNV-PSRPPTQRPDTSGASAEDRVEVDGTKEDE-----NEVASSSSXXXXXXXXXXXXXXXXPAPTVTPDDFTTLASDHPSQQLLKAGKELMRQKRPEQAVVVWGQAAEILRNTIEDSSKPATT 344
The following BLAST results are available for this feature:
InterPro
Analysis Name:
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
100 200 300 400 500 600 700 800 900 1000 1100 Score = Expect = 130.0 / Score = 5.3 Expect = 10.0 / Score = 15.0 Expect = 240.0 / Score = 2.8 Expect = 94.0 / Score = 6.4 Score = 6.667 Score = 8.467 Score = 8.621 Score = Score = Sequence Coil SM00028 PS50005 PS50005 PS50293 SSF48452 SSF48452
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 513..533 IPR019734 Tetratricopeptide repeat SMART SM00028 tpr_5 coord: 947..980 IPR019734 Tetratricopeptide repeat PROSITE PS50005 TPR coord: 987..1020 IPR019734 Tetratricopeptide repeat PROSITE PS50005 TPR coord: 500..533 IPR013026 Tetratricopeptide repeat-containing domain PROSITE PS50293 TPR_REGION coord: 500..533 IPR011990 Tetratricopeptide-like helical domain superfamily SUPERFAMILY 48452 TPR-like coord: 92..215 IPR011990 Tetratricopeptide-like helical domain superfamily SUPERFAMILY 48452 TPR-like coord: 929..1040
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_H-canaliculatus_F_contig10.17.1 ID=prot_H-canaliculatus_F_contig10.17.1|Name=mRNA_H-canaliculatus_F_contig10.17.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1157bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: