mRNA_H-canaliculatus_F_contig11660.1469.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: A0A6H5L8Q2_9PHAE (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8Q2_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 9.080e-160 Identity = 239/259 (92.28%), Postives = 250/259 (96.53%), Query Frame = 1
Query: 1 QDIDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQ---VMGQEKKTLSGFSSKATVSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
QDIDPEMVEVHRFVVD YSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQV+L+SALPQTTVMVVSVTGSTTSGQPLSE+ L EC+KGCEEYEAL AAKASILDFVETRMTSMAPNVCA++GSRITA+LL LTGGLTAMSKTPSCNLQ VMGQEKKTLSGFSSKATVSHAGLLYQS+V+QLAPPYLR KALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQE+QTAKTKKALPKPDDMPARKRGG+R
Sbjct: 170 QDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVELDSALPQTTVMVVSVTGSTTSGQPLSEEDLHECIKGCEEYEALAAAKASILDFVETRMTSMAPNVCALIGSRITAQLLGLTGGLTAMSKTPSCNLQEFPVMGQEKKTLSGFSSKATVSHAGLLYQSDVVQLAPPYLRTKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQEMQTAKTKKALPKPDDMPARKRGGRR 428
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: A0A7S2XZL3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL3_9STRA) HSP 1 Score: 307 bits (787), Expect = 8.090e-100 Identity = 156/255 (61.18%), Postives = 200/255 (78.43%), Query Frame = 1
Query: 4 DIDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQVMGQEKKTLSGFSSKATVSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
DID E++ VHRFV D YS+KFPEL+SL+ DY+R V+ + NEMDMT V+L L +VM+VSVTGSTTSGQPLS Q L +CL+G E + L AK SIL+FVE+RMT++APN+CA++GSR+ A+LL L+GGLT +SK PSCNLQVMGQEK+ L+G+ + A++ H GL+Y E++Q APPYLR+KAL+VTAAK+ LA+R DS+ D G +G++ R E+EDKIEKWQE Q AKTKKALP PD P +KRGGKR
Sbjct: 78 DIDEEVINVHRFVCDLYSKKFPELESLLTNRLDYIRVVERIGNEMDMTLVELGDLLAPASVMLVSVTGSTTSGQPLSPQDLDQCLQGAREVQDLEQAKTSILEFVESRMTAIAPNICALIGSRLAAQLLGLSGGLTQLSKIPSCNLQVMGQEKRALAGYGAAASLPHCGLIYHCELVQDAPPYLRSKALKVTAAKLVLAARVDSFQQDMEGALGKKLRTELEDKIEKWQEPQKAKTKKALPAPDSKPKKKRGGKR 332
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: A0A836CKH5_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH5_9STRA) HSP 1 Score: 293 bits (751), Expect = 9.080e-94 Identity = 148/256 (57.81%), Postives = 203/256 (79.30%), Query Frame = 1
Query: 4 DIDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQVMGQEKKTLSGFSSKAT-VSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
DID E+V+VHRFVVD+YS KFPEL+S++ P DY+RTVQ+M+NEMDMT++ L++ LPQT+VMVVSVTGSTT G+ L E L+ L+GC E+ AL AK+++L FVE +M+++APN+CA++GSRI A+L+ GGL A+S P+CNLQ MGQE++ L+GF++ AT +HAGL++ S+++Q AP YLR K L+V +AKV+LA R D + DP+ VGR++R+E+E K+EKWQE AK K+ALPKPD+ P KRGGKR
Sbjct: 127 DIDDELVQVHRFVVDAYSPKFPELESIVTDPGDYIRTVQLMKNEMDMTRLPLDTVLPQTSVMVVSVTGSTTPGKALGEAELKRVLEGCAEFTALAEAKSTLLTFVEGKMSAIAPNMCAIIGSRIAAQLMGQAGGLAALSNIPACNLQTMGQERRHLAGFATTATGTAHAGLIFYSDLVQSAPVYLRRKLLKVASAKVTLAVRCDLHNQDPA--VGRRFRSELEAKLEKWQEPDQAKIKRALPKPDEAPKSKRGGKR 380
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: A0A7S4DKU2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKU2_HETAK) HSP 1 Score: 286 bits (733), Expect = 7.230e-92 Identity = 149/256 (58.20%), Postives = 191/256 (74.61%), Query Frame = 1
Query: 1 QDIDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQVMGQEKKTLSGFSSKATVSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
QDID E++ +HR+V D YS+KFPEL+SL+P +Y++ VQ + NEMDMT+V+L LP +VM+VSVTGSTTSGQPL E L ECL+G AL AAKA +L FVE+RM +APN+ A++GSR+ A L+AL GGL A+SK P CNLQVMGQEK+ L+GF + A + H G++Y SE++Q P LR KAL+VTAAK +LA+R DSY + PSG G++ R E+EDKI+KWQE Q KTKKA PKP+ KRGGKR
Sbjct: 63 QDIDDEIINIHRYVCDVYSKKFPELESLLPNKLEYMQVVQRIGNEMDMTEVELSDILPSASVMLVSVTGSTTSGQPLPEADLAECLEGARAALALDAAKAKVLGFVESRMALIAPNLVALLGSRLAAVLMALAGGLLALSKIPCCNLQVMGQEKRALAGFGNAAAMKHTGIIYYSELVQSCPVGLRQKALKVTAAKCALAARVDSYQSAPSGQKGQELRQEIEDKIQKWQEPQEGKTKKARPKPEGGRKSKRGGKR 318
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: A0A7S2C7I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I0_9STRA) HSP 1 Score: 288 bits (736), Expect = 1.270e-91 Identity = 148/257 (57.59%), Postives = 191/257 (74.32%), Query Frame = 1
Query: 1 QDIDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQVMGQEKKTLS-GFSSKATVSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
Q ID EMV VH++VVD+YS+KFPEL+SL+PQ DY++ VQ + NEMDMT VDL LP V+ VS+TGSTTSGQPLSE L +C++GC E L K L FVE+RM +APNVCA++ + I A+L+ L GGL MSK PSCNLQ++GQ+K+ L GF+S A + H GL+Y S +Q APPYLR +AL++ AAKV+LA+R D + +PS +GR+ R EV+DKI+KWQE AKTKK+LP PD+ PA+KRGGKR
Sbjct: 117 QKIDDEMVNVHKYVVDTYSKKFPELESLVPQRLDYMQVVQTIGNEMDMTMVDLSDILPNAVVISVSMTGSTTSGQPLSESDLSQCMQGCREAVELEEDKMKSLTFVESRMNMVAPNVCALIDTIIAAQLMGLAGGLVMMSKIPSCNLQILGQQKQVLGHGFASVAAMPHTGLIYYSTAVQRAPPYLRMRALKLVAAKVALAARMDLHQKEPSDALGRKLREEVDDKIDKWQEPPKAKTKKSLPAPDNRPAKKRGGKR 373
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: A0A7S1U3H0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3H0_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.720e-86 Identity = 142/255 (55.69%), Postives = 186/255 (72.94%), Query Frame = 1
Query: 7 IDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQVMGQEKK-TLSGFSSKATVSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
I+ E +V RFV D Y+ KFPEL+SL+ P D+ +TV + NEMD+T VDL LP TVMVVSVTGSTT+G L + L ECLKGCEE L A + ++L FVE RM +APNVCA++G+++ ARLLA+ GGL AMS+ PSCNLQV+GQ+K TL+GFS+ A H G++ S++ Q APPYLR KAL+VTAAKV LA+R D++G D SG +G ++R ++E+KIEKWQE KALPKPD + ++RGG+R
Sbjct: 134 IEEETAKVFRFVADQYAVKFPELESLVSNPLDFAKTVSAIGNEMDLTNVDLNDILPSATVMVVSVTGSTTAGVALRPEVLAECLKGCEEVNGLDADRRTLLSFVEGRMMGLAPNVCALIGAQVAARLLAIAGGLNAMSRVPSCNLQVLGQDKAHTLAGFSNTAIDRHMGIIGYSDLCQSAPPYLRMKALKVTAAKVVLAARTDAFGGDKSGDLGLKFRQDIEEKIEKWQEPTQGSRTKALPKPDPVTKKRRGGRR 388
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: A0A7S2SGQ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGQ5_9STRA) HSP 1 Score: 275 bits (702), Expect = 5.070e-86 Identity = 142/257 (55.25%), Postives = 188/257 (73.15%), Query Frame = 1
Query: 1 QDIDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQVMGQEKK-TLSGFSSKATVSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
Q ID E++ V++FV D Y KFPEL+SL+P DYVR VQ + NEMDMT VDL + LP V+ VS+TGSTTSGQPL E+ L +C GC+E L AK IL FVE+RM+ +APN+CA++ + I A+L+ L GGL+AMSK P+CNLQV+GQ K L GF + A + H GL+Y + +Q APPYLR +AL++ AAKV+LA+R D + ++PSG G + R E++DK+ KWQE Q A+TKKALP PD+ P++KRGGKR
Sbjct: 158 QKIDDEILTVYKFVADLYGTKFPELESLVPNRLDYVRVVQAIGNEMDMTMVDLSAILPNALVISVSMTGSTTSGQPLPEKDLLQCNSGCQEALDLEDAKRKILHFVESRMSMVAPNICAVLDTVIAAQLMGLAGGLSAMSKIPACNLQVLGQNKLGNLGGFGAAAALPHTGLIYFTTAVQQAPPYLRMRALKLVAAKVALAARIDLHQSEPSGTAGAKLRVEIDDKVTKWQETQQARTKKALPIPDEKPSKKRGGKR 414
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: K3W6W3_GLOUD (Nop domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6W3_GLOUD) HSP 1 Score: 267 bits (682), Expect = 6.940e-85 Identity = 139/256 (54.30%), Postives = 185/256 (72.27%), Query Frame = 1
Query: 7 IDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQVMGQEKKTLSGFSSKATVSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDS--YGNDPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
ID E++ +HRFV + Y++KFPELDSL+P DYVR V+ + NEMDMT VDL LP ++ +SVTGS TSG+ LS + L+ C+ C+E +L K+ IL FVE+RM+ +APNV +VG+RI A+L+ L GG+ +S+ PSCNLQV+GQ+KK LSGFSS A + H G+++ ++VIQ PPYLR KA R A K++L +R DS + +D G VG Q+R E+ K+EKWQE Q AKTKKALP PD+ P RKRGGKR
Sbjct: 4 IDDEIIAIHRFVAEIYAKKFPELDSLVPNALDYVRVVKAIGNEMDMTVVDLSKLLPSAAIIGISVTGSGTSGKQLSAEDLKTCMDACDELLSLDKDKSMILGFVESRMSYLAPNVSQLVGTRIAAQLIGLAGGVANLSRIPSCNLQVLGQQKKVLSGFSSAAALKHTGIIFYADVIQNVPPYLRMKACRALAGKIALMARVDSQPHQSDREGKVGAQFRDELIAKMEKWQEPQKAKTKKALPIPDEKPRRKRGGKR 259
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: F0WMW8_9STRA (U4/U6 small nuclear ribonucleoprotein Prp31 putativ n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMW8_9STRA) HSP 1 Score: 268 bits (686), Expect = 4.530e-84 Identity = 141/256 (55.08%), Postives = 181/256 (70.70%), Query Frame = 1
Query: 7 IDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQVMGQEKKTLSGFSSKATVSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDSYGN--DPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
ID E+ +HRF+V+ Y+ KFPELDSL+P DY R V+ + NE DMT VDL S LP TVM VSVTGSTTSG+PLS L+ C++GC E L K IL+FVE+RM +APNV +VG+RI A+L+ L GG+ +S+ PSCNLQV+GQ+KK LSGFSS A + H G+++ ++IQ PPYLR KA R A K++L +R DS N DP G VG ++ ++ K+EKWQE AK+KKALP PD+ P RKRGGKR
Sbjct: 120 IDDEIAAIHRFLVEMYAPKFPELDSLVPNALDYARVVERIGNETDMTLVDLASLLPSATVMSVSVTGSTTSGKPLSPDTLEICIEGCRELFDLEKDKVMILEFVESRMRFLAPNVAQLVGTRIAAQLVGLAGGILELSRIPSCNLQVLGQQKKVLSGFSSAAALRHTGIIFHCDLIQNVPPYLRIKACRALAGKLALCARVDSEQNASDPDGQVGARFHQDLVMKMEKWQEPHKAKSKKALPVPDEKPRRKRGGKR 375
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Match: A0A024GER9_9STRA (Nop domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GER9_9STRA) HSP 1 Score: 264 bits (675), Expect = 2.180e-82 Identity = 139/256 (54.30%), Postives = 180/256 (70.31%), Query Frame = 1
Query: 7 IDPEMVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESALPQTTVMVVSVTGSTTSGQPLSEQALQECLKGCEEYEALVAAKASILDFVETRMTSMAPNVCAMVGSRITARLLALTGGLTAMSKTPSCNLQVMGQEKKTLSGFSSKATVSHAGLLYQSEVIQLAPPYLRNKALRVTAAKVSLASRFDSYGN--DPSGHVGRQWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKR 768
ID E+ +HRF+++ Y+ KFPEL+SL+P DY R V+ + NE DMT VDL S LP TVM VSVTGSTTSG+PL AL+ C++ C+E L K IL+FVE+RM +APNV +VG+RI A+L+ L GG+ +++ PSCNLQV+GQ+KK LSGFSS A + H G+++ ++IQ PPYLR KA R A K +L +R DS N DP G VG Q R ++ K+EKWQE AK+KKALP PD+ P RKRGGKR
Sbjct: 123 IDDEIAAIHRFLIEMYAPKFPELESLVPNALDYARVVERIGNETDMTLVDLASLLPSATVMSVSVTGSTTSGKPLPPDALEICMEACKELFDLEKDKIMILEFVESRMRFLAPNVAQLVGTRIAAQLIGLAGGVLELARIPSCNLQVLGQQKKVLSGFSSAAALKHTGIIFHCDLIQNVPPYLRIKACRALAGKTALCARVDSDQNASDPDGQVGAQLRQDLIIKMEKWQEPHKAKSKKALPVPDEKPRRKRGGKR 378 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11660.1469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11660.1469.1 >prot_H-canaliculatus_F_contig11660.1469.1 ID=prot_H-canaliculatus_F_contig11660.1469.1|Name=mRNA_H-canaliculatus_F_contig11660.1469.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=251bp MVEVHRFVVDSYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVDLESAback to top mRNA from alignment at H-canaliculatus_F_contig11660:274..3434- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11660.1469.1 ID=mRNA_H-canaliculatus_F_contig11660.1469.1|Name=mRNA_H-canaliculatus_F_contig11660.1469.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3161bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11660:274..3434- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11660:274..3434- >mRNA_H-canaliculatus_F_contig11660.1469.1 ID=mRNA_H-canaliculatus_F_contig11660.1469.1|Name=mRNA_H-canaliculatus_F_contig11660.1469.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1506bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11660:274..3434- (Hapterophycus canaliculatus Oshoro5f female)back to top |