prot_H-canaliculatus_F_contig10.14.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10.14.1
Unique Nameprot_H-canaliculatus_F_contig10.14.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length125
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10.14.1 vs. uniprot
Match: A0A6H5K718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K718_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 9.140e-13
Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 0 
Query:   60 HRRKANAVLLEQAGGNPKEAGLHSLRIGAASTLVVGGGIPKRVIQREGRWKGG 112
            + +  +A ++E+AGGNPK+ GLHSLRIGAA+TL  GG +P R+IQ EGRWK G
Sbjct:  211 YSKALSAQIVEKAGGNPKQVGLHSLRIGAATTLAAGGDVPDRIIQGEGRWKEG 263
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BLAST of mRNA_H-canaliculatus_F_contig10.14.1 vs. uniprot
Match: A0A6H5JL16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL16_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.920e-12
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:   68 LLEQAGGNPKEAGLHSLRIGAASTLVVGGGIPKRVIQREGRWKGG 112
            ++E+AGG+PK+ GLHSLRIGA +TL  GG +P R  QREGRWK G
Sbjct:   39 IVEEAGGDPKQVGLHSLRIGATTTLAAGGDVPDRTTQREGRWKEG 83
[Close]
BLAST of mRNA_H-canaliculatus_F_contig10.14.1 vs. uniprot
Match: A0A6H5KTP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP7_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.010e-10
Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = 0 
Query:   68 LLEQAGGNPKEAGLHSLRIGAASTLVVGGGIPKRVIQREGRWK 110
            ++++AGG+PK+ GLHSLRIGAA+TL  GG +P R+IQ EGRWK
Sbjct:  838 IVDKAGGDPKQVGLHSLRIGAATTLAAGGDVPDRIIQSEGRWK 880
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K718_9PHAE9.140e-1360.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL16_9PHAE2.920e-1264.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTP7_9PHAE2.010e-1065.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 10..111
e-value: 3.2E-5
score: 25.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10contigH-canaliculatus_F_contig10:18848..19222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10.14.1mRNA_H-canaliculatus_F_contig10.14.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10 18817..19222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10.14.1 ID=prot_H-canaliculatus_F_contig10.14.1|Name=mRNA_H-canaliculatus_F_contig10.14.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=125bp
MGSPSLFGSHVHNVLNVTGMQGRRQQSAVVRPCASSALCHLISGPVYTFA
VYVAPSGATHRRKANAVLLEQAGGNPKEAGLHSLRIGAASTLVVGGGIPK
RVIQREGRWKGGCLFIFFLHHLLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf