prot_H-canaliculatus_F_contig1069.661.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1069.661.1
Unique Nameprot_H-canaliculatus_F_contig1069.661.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length571
Homology
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: D8LNZ8_ECTSI (60S ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI)

HSP 1 Score: 962 bits (2488), Expect = 0.000e+0
Identity = 497/563 (88.28%), Postives = 523/563 (92.90%), Query Frame = 0
Query:   11 DGLAAPPQPEPEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPR-GHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGG--ISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLDNPDAGPDGENDTGAASASIFEAGAAPAPNADVLSLDNDREL 570
            DGLAAPP PEPEKQMPT+LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLT+HQCRGC+RYLRPGWVECKLESRELMAVCLRK++GLKKVKLVDA+WIWTEPHSRRLK+KLTVQKEVGNGAVLQQAM VTFVVRNQQC+ CAAAFT+NTWTAVVQVRQRVDHKRTFFYLEQLILKH+AHSQCTNIQTF+DGMDFYF EKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRL +AQR+TSAVQF+DPLTAQTADVTEEKYWRYEFPSLL+STRLV YVVLGTE LPEKARPSAPR GHR+RKARVAEVELARECDLGRNDDRVT +SHLGHILRAGDTVL +DVSSANLPEGEATG+L G LPDVVLVRKVYPR+ DRE GG   K DRHWKLGELEKDGGD      +SEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYK G  AAK    D D  MEDVEEMDEEEVRL+ELLD MTLDN +AGPDGE D GAASASIFEAGAAPAPNA++L LD+D EL
Sbjct:    9 DGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRH-DREGGG---KADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQG-LAAKPAAADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELL-LDDDPEL 565          
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: A0A835ZB23_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA)

HSP 1 Score: 645 bits (1664), Expect = 2.470e-226
Identity = 340/555 (61.26%), Postives = 414/555 (74.59%), Query Frame = 0
Query:   17 PQPEPEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGP--AAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLDNPDAGPDGENDTGAASASIFEAGAAPAPNADVLSLDNDRE 569
            P P    ++ TV CC+CS PI PNPT MCV CIRTQVDITEGIA   TI QCRGC R+L+P WVE  LESRELMA+CLRKV+GL +VKLVDA+W+WTE HSRRLKLKLTVQKEV NGA+LQQA+ V F VRNQQC  C A++TNNTW AVVQ+RQRVDHKRTFFYLEQLILKH+AH    N+QT +DGMDF++ E++ +AR + FLE V+P ++K+SKKL+SADNHSN +NFHYTYLVT+ PVCKDDLVLLP RLAE+LG  +RL + QR+++ +  +DP+TAQTADV  + Y R+EF +LL+STRLV +VVLG E LP  + P+  +G RMR+AR+AEV +ARECDLG ND + T ISHLGH+L+AGDTVLG+DV+SANLPE    G L  +LPDVVLVRKVY       SG G     R W+L  LEKD          KRD  A + DYERF+QQLE+DK+MRRQVNL+K     AAAK GG D D       E+DEE++R+EELLD M LD+PDA PD  +      A +F AG AP  N   L+LD++ +
Sbjct:    8 PPPSALPELATVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIPCRIKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLPLPSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRG-LKTALPDVVLVRKVYT------SGAG----KRAWRLEALEKD----REAELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGAAAKTGGSDDDN------EVDEEQIRVEELLDDMRLDDPDAAPDDGD------AQVFSAGEAPGVNFAALALDDEDD 535          
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: A0A7S2WJE1_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA)

HSP 1 Score: 523 bits (1347), Expect = 7.070e-178
Identity = 272/512 (53.12%), Postives = 355/512 (69.34%), Query Frame = 0
Query:   27 TVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRY------EFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGE-ATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYK--TGPAAAKAGGGDADEKMEDVE-EMDEEEVRLEELLDGMTL 528
            TVLCC C  PI  NP+ MC  C+  + DITEGIAT L++H+CRGC+R+LRP WV  +LES+ELMA+CLRK+ GL KV LVDA WIWTEPHS RLK+K+T+QKEV  GA+LQQ+  V FV+RNQQCE C   +T+ TW AVVQVRQRVDHKRTF+YLEQL+LKH+ HS+C +IQ+FRDGMDFYF EK+ + RF DFL+G +P ++K++KKL+S+DNHSNIFNF +T+L  ++P+CKDDL +LP RLA++L +IS LV+ +RVT  V  +DPLT   A    + Y +        F  ++++ RL+ Y+VLG E +    R  A       K R+A VE+AR  DLG ND +   +SHLGHILR GDTVLG+DVS+ANL + + A  E   +LP+VVLVRK+Y     R          R W L +LE D  +      +K D  +   DYERF+QQLE DK+MR+ VNLY+   GP  A A   D  E+ E  E EMDEE+V ++ELL+G+ +
Sbjct:   18 TVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVRIKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKSKTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANLDDADVARIEKRRALPEVVLVRKLYGVESQR----------RGWTLRKLEYDAVEEPTRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREAGPRKAAAAAVDPLEEDEGEEDEMDEEQVHIDELLEGLDI 519          
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV)

HSP 1 Score: 500 bits (1288), Expect = 1.200e-169
Identity = 263/516 (50.97%), Postives = 350/516 (67.83%), Query Frame = 0
Query:   21 PEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSA--NLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGIS-----EKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLD 529
            PE+ +P +LCCMC++PI  N  +MCV C++ QVD+TEGI   + +HQCRGC ++ RP WV  +LESREL+A+CL+K++GL KVKLVDA W+WTEPHS+RLKLKLTVQKEV NGA+LQQ+  VTF+VRNQQC+ C A+FTNN+W AVVQVRQ+VDHKRTFFYLEQLILKH  H + ++I++  DG+DF+F E++H+ RFVDFL   VP K+K +KKL+SADNHSN  N+ +TY V L  VCKDDLV LP +LA  LGNIS L I  +VTS++  IDP T Q A++  +KYWRY F +L +S +LV Y VL +  L        P     RK R+AE+E+ R  D G ND R    +HLG +L  GDT +G+D+S++  N  + +   E G +LPDV+LVRK + R   + S        R+WKL  +E        GI      +K ++   E DY+ FL +LE DK+MR ++N+YK     A    GD D+ MED +E     + +EELLD M ++
Sbjct:    5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVP-VRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAGITLPDVILVRKQFLRRVQKRS--------RNWKLKNIE--------GIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYKVDDDKA----GD-DQDMEDDDEGTGV-IPVEELLDDMKIE 497          
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR)

HSP 1 Score: 499 bits (1285), Expect = 3.650e-169
Identity = 261/509 (51.28%), Postives = 350/509 (68.76%), Query Frame = 0
Query:   24 QMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAP-RGHRM-RKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATG--ELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTL 528
            QMPT+LCCMC+ PI  N  + CV C+++QVD+TEGI   + IHQCRGC R+ RP WV  +LESREL+A+CL+K+N L +VKL+DA WIWTEPHSRRLKLKLTVQKEV +  ++QQ+  VTFVVRNQQC+ C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++  DG+DF+F E++H+ RFVDFL+  VP KVK +KKL+SADNHSN  N+ +TY V + PVCKDDLVLLP +LA  LGN+S L + Q VTS++  +DP T Q A++  EKYWRY F +L +   +  + VL +  +   A PS   R  R+ RK R+A++E+ R+ D G ND R   +SHLG +L  GD+  G+D++SA   + +     + G +LPDVVLV+K++PR   + +        R+WKL ++E   G    G   K D +  E+DYE+FL +LE DK++R Q+NLYK     AK    DA E+    +++    V L ELLD + +
Sbjct:    7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGMTLPDVVLVKKMFPRRIQKRA--------RNWKLKKME---GVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYKDDTKPAKPADDDAMEE----DDVGAPAVELHELLDDLAM 497          
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT)

HSP 1 Score: 499 bits (1285), Expect = 3.910e-169
Identity = 271/538 (50.37%), Postives = 362/538 (67.29%), Query Frame = 0
Query:   24 QMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAP-RGHRM-RKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATG--ELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYK--TGPAAAKAGGGDADEKMEDVEEMDEEEV-----RLEELLDGMTLDNPDAGPDGENDTGAASASIFE 550
            QMPT+LCCMC+ PI  N  + CV C+++QVD+TEGI   + IHQCRGC R+ RP WV  +LESREL+A+CL+K+N L +VKL+DA WIWTEPHSRRLKLKLTVQKEV +  ++QQ+  VTFVVRNQQC+ C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++  DG+DF+F E++H+ RFVDFL+  VP KVK +KKL+SADNHSN  N+ +TY V + PVCKDDLVLLP +LA  LGN+S L + Q VTS++  +DP T Q A+V  EKYWRY F +L +   +    VL +  +   A PS   R  R+ RK R+A++E+ R+ D G ND R   +SHLG +L  GD+  G+D++SA   + +     + G +LPDVVLV+K++PR   + +        R+WKL ++E   G    G   K D +  E+DYE+F+ +LE DK+MR Q+NLYK  T PA          +  ED + MDE++V      L ELLD + + + D  P   ++T A   S +E
Sbjct:    7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGLTLPDVVLVKKMFPRRIQKRA--------RNWKLKKME---GVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYKDETKPA----------QPAEDDDAMDEDDVGAPAVELHELLDDLAMKDDDPTPQILSETEANQTSAWE 520          
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA)

HSP 1 Score: 496 bits (1276), Expect = 7.820e-168
Identity = 256/515 (49.71%), Postives = 344/515 (66.80%), Query Frame = 0
Query:   22 EKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSA--NLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLDNPDAG 534
            E  +P +LCC+C++PI  N  +MCV C++ QVD+TEGI   + +HQCRGC ++ RP WV  +LESREL+A+CL+K+ GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ+  VTF+VRNQQC+ C A+FTN++W AVVQVRQ+V+HKRTFFYLEQLILKH  H + TNI++  DG+DF+F E++H+ RFVDFL+  VP  +K +KKL+SADNHSN  N+ +TY V + PVCKDDLV LP +LA  LGNIS L +  +VTS++  IDP T Q A++  EKYWRY F +L +S +L  Y VL +  +    +   P     RK R+AE+E+ R  D G ND R   +SHLG +L  GDT +G+D+ ++  N  + +   E G +LPDVVLVRK + R   +          R WKL  +E     G   + +K D    + DYE FL  LE DK+MR ++N+YK            A      +E+ D  ++ L+ELLD MT+++ + G
Sbjct:    5 EHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPMEIPMKGGVP-VRTNRKTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAGITLPDVVLVRKQFLRRVQKRQ--------RKWKLKTIE-----GIESMGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYKNDEXXXXXXXXXAS-----MEDGDGGDIPLDELLDDMTMEDQENG 500          
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: W7TWI9_9STRA (60S ribosomal export protein NMD3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWI9_9STRA)

HSP 1 Score: 499 bits (1285), Expect = 9.000e-168
Identity = 280/560 (50.00%), Postives = 370/560 (66.07%), Query Frame = 0
Query:   29 LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLR----PGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWR--YEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATG---ELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTG---PAAAK----------------------------AGGGDADEKM------------EDVEEMDEEEVRLEELLDGMTLDNPDAGPD 536
            +CCMC++ I PNPT+MC+ C+RTQV+I  G++T +T+HQCRGC +Y+      GW   + ESRELMAVCLRKV GL +++LVDA WIWTEPHS+RLKLKLTVQ+EV NGAVLQ+A+ V FVVRNQQC  C A++T   W A+VQVRQRVDHKRTF +LEQLILKH+AH+Q   IQ F DGMDFYF E++ +ARF +FLE   P +VK SKKLVS D+HSN+FN+ YT ++ +VPVCKDDLV+LP +LA++LG+I+RL +  RV + +  IDPLT QTA+V+ EKY +  +EF +LL+++RLV ++VLG+E      + SAP   R ++ R+AEVE+A   DLG ND R  V +HLGHILRAGDTVLG+ +++A+L   +A     +    LPD VLVRKVY  NE R            W+L + E D  +    + E  +    ++D   + QQLE D++MRR+VN+YK G   P  A+                             G GD   ++            EDV E DEE +RL+ELLD + LD+PDA PD
Sbjct:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAP-ARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYS-NEGRIRPA--------WRLKKFEADEME----VVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPD 563          
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: K3X9M7_GLOUD (60S ribosomal export protein NMD3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9M7_GLOUD)

HSP 1 Score: 496 bits (1277), Expect = 9.460e-168
Identity = 259/521 (49.71%), Postives = 346/521 (66.41%), Query Frame = 0
Query:   22 EKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSA--NLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGIS----EKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEE--------VRLEELLDGMTL 528
            E  +PT+LCCMC+ PI  N  +MCV C++ QVDITEGI   + IHQCRGC ++ RP W   +LESREL+A+CL+K+N L KVKL+DA W+WTEPHS+RLKLKLTVQKEV +  +LQQ+  VTF+VRNQQC+ C   F N  W AVVQVRQRVDHKRTFF+LEQLILKH AH + +NI++  DG+DF+F E++H+ RFVDFL+  VP K+K+SKKL+SADNHSN  N+ ++Y+V + PVCKDDLV+LP +LA  +GNIS LV+ Q V+S++  IDP T QTA++  EKYWRY F ++ +   +  Y VL +  +   +    P     RK R+AE+E+ R  D G ND R T   HL ++   GDT LG+D+++A  N  + E   + G +LPDV+LV+K +PR   +          R+WKL ++E        G+      K D +  E DYE+FL  LE DK+MR Q+NLYK   A     GGDAD   ED E  ++ E        V ++ELLD +T+
Sbjct:    6 EASLPTILCCMCATPIKANAANMCVSCLKGQVDITEGIPKEVIIHQCRGCLKWSRPPWAVAELESRELLAICLKKINNLNKVKLIDANWVWTEPHSKRLKLKLTVQKEVLSKMILQQSFIVTFIVRNQQCDDCQKLFANQAWKAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTSNIESHPDGVDFFFVERNHALRFVDFLQECVPIKLKYSKKLISADNHSNTHNYKFSYMVDIAPVCKDDLVVLPLKLARLIGNISSLVLVQSVSSSIHVIDPFTTQTAEIDNEKYWRYPFKAIRSIKAMTEYTVLDSTPMAIPSGGGKPIRVN-RKTRLAEMEVVRNADFGVNDTRYTTTCHLANLFHVGDTALGYDLTTAVFNDNDLEPLEQAGITLPDVILVKKQFPRRIQKRP--------RNWKLKKME--------GVEVANPRKTDLSKEEMDYEQFLDDLEEDKEMRSQINLYKDDAAQENRRGGDADAMDEDDEGDEDYEDGDARRPAVGIDELLDDLTV 509          
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: A0A7S2AZN0_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZN0_9STRA)

HSP 1 Score: 493 bits (1269), Expect = 8.080e-167
Identity = 262/498 (52.61%), Postives = 347/498 (69.68%), Query Frame = 0
Query:   44 MCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRY-EFPSLLTSTRLVAYVVLGTEALP-EKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLP----EGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGEL-----EKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLDN 530
            MC  C+++ VDIT+GI T L++++CRGC+++L+PGW+E  LES EL+A+CL+K+ GL KVKLVDA+W+WTEPHS RLK+KL +QKEV N AVLQQA  V +V+RNQQC  C   +T   W AVVQVRQRVDHKRTF+YLEQL+LKH  H+ C +IQTFRDGMDFYF E++ + RF DFL+ VVP ++K++KKL+S+DNHSN+FN+ +T+L  + P+CKDDLV+LPK LA +LGNIS LV+ +RV++ +  +DP T Q A    E +++   F ++L++ RLV YVVLGTE L  ++   S P   + RK R+ EVELAR  DLG ND R+T +SHLGH+LRAGDTVLG+D+    L     E  A  E   +LPD  LVRK+Y        G G +   R WKL EL     E++GG G         E  A KDYE+F+QQLE D++MRRQVNL+K   A       D     +D  EMDE+E+R+ ELL+ + LD+
Sbjct:    1 MCAQCLKSAVDITDGIPTQLSVYRCRGCQKWLKPGWIEADLESGELLALCLKKIRGLNKVKLVDASWVWTEPHSMRLKIKLNIQKEVMNAAVLQQAFVVEYVIRNQQCSDCQKQYTGGVWKAVVQVRQRVDHKRTFYYLEQLLLKHGVHTNCLSIQTFRDGMDFYFAERNQAVRFTDFLQTVVPIRMKNTKKLISSDNHSNLFNYKFTHLGVIAPLCKDDLVVLPKALALTLGNISPLVLIERVSTFIHLVDPFTCQRASFDIEHFYKVGAFGAVLSAARLVEYVVLGTEDLILDERESSTPTPTQKRKKRLVEVELARSADLGVNDTRLTCVSHLGHLLRAGDTVLGYDLERGALHSLDRETMAQVEKRRALPDSALVRKLYGVGS---GGDGETTKSRRWKLKELAVQEEERNGGKGA--------EDVAMKDYEQFMQQLEGDREMRRQVNLFK---ATDDDQDMDTAVATDDACEMDEQEIRIGELLEDLGLDD 484          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNZ8_ECTSI0.000e+088.2860S ribosomal export protein NMD3 n=2 Tax=Ectocarp... [more]
A0A835ZB23_9STRA2.470e-22661.2660S ribosomal export protein NMD3 n=1 Tax=Tribonem... [more]
A0A7S2WJE1_9STRA7.070e-17853.1360S ribosomal export protein NMD3 n=1 Tax=Rhizochr... [more]
T0RPV6_SAPDV1.200e-16950.9760S ribosomal export protein NMD3 n=4 Tax=Saproleg... [more]
W2I7I2_PHYPR3.650e-16951.2860S ribosomal export protein NMD3 n=9 Tax=Peronosp... [more]
D0MSQ0_PHYIT3.910e-16950.3760S ribosomal export protein NMD3 n=18 Tax=Peronos... [more]
A0A6G0XWA3_9STRA7.820e-16849.7160S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
W7TWI9_9STRA9.000e-16850.0060S ribosomal export protein NMD3 n=2 Tax=Monodops... [more]
K3X9M7_GLOUD9.460e-16849.7160S ribosomal export protein NMD3 n=1 Tax=Globispo... [more]
A0A7S2AZN0_9STRA8.080e-16752.6160S ribosomal export protein NMD3 n=1 Tax=Dictyoch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 502..522
IPR007064Nmd3, N-terminalPFAMPF04981NMD3coord: 30..256
e-value: 7.6E-75
score: 251.5
IPR039768Ribosomal export protein Nmd3PANTHERPTHR12746NONSENSE-MEDIATED MRNA DECAY PROTEIN 3coord: 20..528

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1069contigH-canaliculatus_F_contig1069:7310..11023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1069.661.1mRNA_H-canaliculatus_F_contig1069.661.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1069 7264..11950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1069.661.1 ID=prot_H-canaliculatus_F_contig1069.661.1|Name=mRNA_H-canaliculatus_F_contig1069.661.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=571bp
MEVAPAMAAADGLAAPPQPEPEKQMPTVLCCMCSLPIPPNPTSMCVLCIR
TQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGL
KKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQ
CEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQT
FRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHY
TYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQ
TADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRK
ARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEG
EATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGD
GGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGG
DADEKMEDVEEMDEEEVRLEELLDGMTLDNPDAGPDGENDTGAASASIFE
AGAAPAPNADVLSLDNDREL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039768Nmd3
IPR007064Nmd3_N