mRNA_H-canaliculatus_F_contig1069.661.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: D8LNZ8_ECTSI (60S ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI) HSP 1 Score: 963 bits (2489), Expect = 0.000e+0 Identity = 497/563 (88.28%), Postives = 523/563 (92.90%), Query Frame = 2 Query: 77 DGLAAPPQPEPEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPR-GHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGG--ISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLDNPDAGPDGENDTGAASASIFEAGAAPAPNADVLSLDNDREL 1756 DGLAAPP PEPEKQMPT+LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLT+HQCRGC+RYLRPGWVECKLESRELMAVCLRK++GLKKVKLVDA+WIWTEPHSRRLK+KLTVQKEVGNGAVLQQAM VTFVVRNQQC+ CAAAFT+NTWTAVVQVRQRVDHKRTFFYLEQLILKH+AHSQCTNIQTF+DGMDFYF EKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRL +AQR+TSAVQF+DPLTAQTADVTEEKYWRYEFPSLL+STRLV YVVLGTE LPEKARPSAPR GHR+RKARVAEVELARECDLGRNDDRVT +SHLGHILRAGDTVL +DVSSANLPEGEATG+L G LPDVVLVRKVYPR+ DRE GG K DRHWKLGELEKDGGD +SEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYK G AAK D D MEDVEEMDEEEVRL+ELLD MTLDN +AGPDGE D GAASASIFEAGAAPAPNA++L LD+D EL Sbjct: 9 DGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRH-DREGGG---KADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQG-LAAKPAAADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELL-LDDDPEL 565
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: A0A835ZB23_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA) HSP 1 Score: 645 bits (1664), Expect = 1.900e-221 Identity = 340/553 (61.48%), Postives = 413/553 (74.68%), Query Frame = 2 Query: 95 PQPEPEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGP--AAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLDNPDAGPDGENDTGAASASIFEAGAAPAPNADVLSLDND 1747 P P ++ TV CC+CS PI PNPT MCV CIRTQVDITEGIA TI QCRGC R+L+P WVE LESRELMA+CLRKV+GL +VKLVDA+W+WTE HSRRLKLKLTVQKEV NGA+LQQA+ V F VRNQQC C A++TNNTW AVVQ+RQRVDHKRTFFYLEQLILKH+AH N+QT +DGMDF++ E++ +AR + FLE V+P ++K+SKKL+SADNHSN +NFHYTYLVT+ PVCKDDLVLLP RLAE+LG +RL + QR+++ + +DP+TAQTADV + Y R+EF +LL+STRLV +VVLG E LP + P+ +G RMR+AR+AEV +ARECDLG ND + T ISHLGH+L+AGDTVLG+DV+SANLPE G L +LPDVVLVRKVY SG G R W+L LEKD KRD A + DYERF+QQLE+DK+MRRQVNL+K AAAK GG D D E+DEE++R+EELLD M LD+PDA PD + A +F AG AP N L+LD++ Sbjct: 8 PPPSALPELATVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIPCRIKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLPLPSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRG-LKTALPDVVLVRKVYT------SGAG----KRAWRLEALEKD----REAELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGAAAKTGGSDDDN------EVDEEQIRVEELLDDMRLDDPDAAPDDGD------AQVFSAGEAPGVNFAALALDDE 533
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: A0A7S2WJE1_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA) HSP 1 Score: 523 bits (1347), Expect = 2.570e-173 Identity = 272/512 (53.12%), Postives = 355/512 (69.34%), Query Frame = 2 Query: 125 TVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRY------EFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGE-ATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYK--TGPAAAKAGGGDADEKMEDVE-EMDEEEVRLEELLDGMTL 1630 TVLCC C PI NP+ MC C+ + DITEGIAT L++H+CRGC+R+LRP WV +LES+ELMA+CLRK+ GL KV LVDA WIWTEPHS RLK+K+T+QKEV GA+LQQ+ V FV+RNQQCE C +T+ TW AVVQVRQRVDHKRTF+YLEQL+LKH+ HS+C +IQ+FRDGMDFYF EK+ + RF DFL+G +P ++K++KKL+S+DNHSNIFNF +T+L ++P+CKDDL +LP RLA++L +IS LV+ +RVT V +DPLT A + Y + F ++++ RL+ Y+VLG E + R A K R+A VE+AR DLG ND + +SHLGHILR GDTVLG+DVS+ANL + + A E +LP+VVLVRK+Y R R W L +LE D + +K D + DYERF+QQLE DK+MR+ VNLY+ GP A A D E+ E E EMDEE+V ++ELL+G+ + Sbjct: 18 TVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVRIKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKSKTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANLDDADVARIEKRRALPEVVLVRKLYGVESQR----------RGWTLRKLEYDAVEEPTRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREAGPRKAAAAAVDPLEEDEGEEDEMDEEQVHIDELLEGLDI 519
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV) HSP 1 Score: 501 bits (1289), Expect = 2.580e-165 Identity = 273/549 (49.73%), Postives = 362/549 (65.94%), Query Frame = 2 Query: 107 PEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSA--NLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGIS-----EKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLDNPDAGPDGENDTGAASASIFEAGAAPAPNADVL 1732 PE+ +P +LCCMC++PI N +MCV C++ QVD+TEGI + +HQCRGC ++ RP WV +LESREL+A+CL+K++GL KVKLVDA W+WTEPHS+RLKLKLTVQKEV NGA+LQQ+ VTF+VRNQQC+ C A+FTNN+W AVVQVRQ+VDHKRTFFYLEQLILKH H + ++I++ DG+DF+F E++H+ RFVDFL VP K+K +KKL+SADNHSN N+ +TY V L VCKDDLV LP +LA LGNIS L I +VTS++ IDP T Q A++ +KYWRY F +L +S +LV Y VL + L P RK R+AE+E+ R D G ND R +HLG +L GDT +G+D+S++ N + + E G +LPDV+LVRK + R + S R+WKL +E GI +K ++ E DY+ FL +LE DK+MR ++N+YK A GD D+ MED +E + +EELLD M ++ EN+ S I EA A+ N D L Sbjct: 5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVP-VRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAGITLPDVILVRKQFLRRVQKRS--------RNWKLKNIE--------GIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYKVDDDKA----GD-DQDMEDDDEGTGV-IPVEELLDDMKIE--------ENEVEILS--ITEANASHGLNVDDL 520
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR) HSP 1 Score: 499 bits (1285), Expect = 1.100e-164 Identity = 261/509 (51.28%), Postives = 350/509 (68.76%), Query Frame = 2 Query: 116 QMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAP-RGHRM-RKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATG--ELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTL 1630 QMPT+LCCMC+ PI N + CV C+++QVD+TEGI + IHQCRGC R+ RP WV +LESREL+A+CL+K+N L +VKL+DA WIWTEPHSRRLKLKLTVQKEV + ++QQ+ VTFVVRNQQC+ C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++ DG+DF+F E++H+ RFVDFL+ VP KVK +KKL+SADNHSN N+ +TY V + PVCKDDLVLLP +LA LGN+S L + Q VTS++ +DP T Q A++ EKYWRY F +L + + + VL + + A PS R R+ RK R+A++E+ R+ D G ND R +SHLG +L GD+ G+D++SA + + + G +LPDVVLV+K++PR + + R+WKL ++E G G K D + E+DYE+FL +LE DK++R Q+NLYK AK DA E+ +++ V L ELLD + + Sbjct: 7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGMTLPDVVLVKKMFPRRIQKRA--------RNWKLKKME---GVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYKDDTKPAKPADDDAMEE----DDVGAPAVELHELLDDLAM 497
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT) HSP 1 Score: 499 bits (1285), Expect = 1.170e-164 Identity = 271/538 (50.37%), Postives = 362/538 (67.29%), Query Frame = 2 Query: 116 QMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAP-RGHRM-RKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATG--ELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYK--TGPAAAKAGGGDADEKMEDVEEMDEEEV-----RLEELLDGMTLDNPDAGPDGENDTGAASASIFE 1696 QMPT+LCCMC+ PI N + CV C+++QVD+TEGI + IHQCRGC R+ RP WV +LESREL+A+CL+K+N L +VKL+DA WIWTEPHSRRLKLKLTVQKEV + ++QQ+ VTFVVRNQQC+ C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++ DG+DF+F E++H+ RFVDFL+ VP KVK +KKL+SADNHSN N+ +TY V + PVCKDDLVLLP +LA LGN+S L + Q VTS++ +DP T Q A+V EKYWRY F +L + + VL + + A PS R R+ RK R+A++E+ R+ D G ND R +SHLG +L GD+ G+D++SA + + + G +LPDVVLV+K++PR + + R+WKL ++E G G K D + E+DYE+F+ +LE DK+MR Q+NLYK T PA + ED + MDE++V L ELLD + + + D P ++T A S +E Sbjct: 7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGLTLPDVVLVKKMFPRRIQKRA--------RNWKLKKME---GVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYKDETKPA----------QPAEDDDAMDEDDVGAPAVELHELLDDLAMKDDDPTPQILSETEANQTSAWE 520
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA) HSP 1 Score: 496 bits (1276), Expect = 2.280e-163 Identity = 256/515 (49.71%), Postives = 344/515 (66.80%), Query Frame = 2 Query: 110 EKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSA--NLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLDNPDAG 1648 E +P +LCC+C++PI N +MCV C++ QVD+TEGI + +HQCRGC ++ RP WV +LESREL+A+CL+K+ GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ+ VTF+VRNQQC+ C A+FTN++W AVVQVRQ+V+HKRTFFYLEQLILKH H + TNI++ DG+DF+F E++H+ RFVDFL+ VP +K +KKL+SADNHSN N+ +TY V + PVCKDDLV LP +LA LGNIS L + +VTS++ IDP T Q A++ EKYWRY F +L +S +L Y VL + + + P RK R+AE+E+ R D G ND R +SHLG +L GDT +G+D+ ++ N + + E G +LPDVVLVRK + R + R WKL +E G + +K D + DYE FL LE DK+MR ++N+YK A +E+ D ++ L+ELLD MT+++ + G Sbjct: 5 EHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPMEIPMKGGVP-VRTNRKTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAGITLPDVVLVRKQFLRRVQKRQ--------RKWKLKTIE-----GIESMGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYKNDEXXXXXXXXXAS-----MEDGDGGDIPLDELLDDMTMEDQENG 500
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: W7TWI9_9STRA (60S ribosomal export protein NMD3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWI9_9STRA) HSP 1 Score: 499 bits (1285), Expect = 2.700e-163 Identity = 280/560 (50.00%), Postives = 370/560 (66.07%), Query Frame = 2 Query: 131 LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLR----PGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWR--YEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLPEGEATG---ELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTG---PAAAK----------------------------AGGGDADEKM------------EDVEEMDEEEVRLEELLDGMTLDNPDAGPD 1654 +CCMC++ I PNPT+MC+ C+RTQV+I G++T +T+HQCRGC +Y+ GW + ESRELMAVCLRKV GL +++LVDA WIWTEPHS+RLKLKLTVQ+EV NGAVLQ+A+ V FVVRNQQC C A++T W A+VQVRQRVDHKRTF +LEQLILKH+AH+Q IQ F DGMDFYF E++ +ARF +FLE P +VK SKKLVS D+HSN+FN+ YT ++ +VPVCKDDLV+LP +LA++LG+I+RL + RV + + IDPLT QTA+V+ EKY + +EF +LL+++RLV ++VLG+E + SAP R ++ R+AEVE+A DLG ND R V +HLGHILRAGDTVLG+ +++A+L +A + LPD VLVRKVY NE R W+L + E D + + E + ++D + QQLE D++MRR+VN+YK G P A+ G GD ++ EDV E DEE +RL+ELLD + LD+PDA PD Sbjct: 18 ICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAP-ARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYS-NEGRIRPA--------WRLKKFEADEME----VVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPD 563
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: K3X9M7_GLOUD (60S ribosomal export protein NMD3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9M7_GLOUD) HSP 1 Score: 496 bits (1277), Expect = 2.770e-163 Identity = 259/521 (49.71%), Postives = 346/521 (66.41%), Query Frame = 2 Query: 110 EKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRYEFPSLLTSTRLVAYVVLGTEALPEKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSA--NLPEGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGELEKDGGDGGGGIS----EKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEE--------VRLEELLDGMTL 1630 E +PT+LCCMC+ PI N +MCV C++ QVDITEGI + IHQCRGC ++ RP W +LESREL+A+CL+K+N L KVKL+DA W+WTEPHS+RLKLKLTVQKEV + +LQQ+ VTF+VRNQQC+ C F N W AVVQVRQRVDHKRTFF+LEQLILKH AH + +NI++ DG+DF+F E++H+ RFVDFL+ VP K+K+SKKL+SADNHSN N+ ++Y+V + PVCKDDLV+LP +LA +GNIS LV+ Q V+S++ IDP T QTA++ EKYWRY F ++ + + Y VL + + + P RK R+AE+E+ R D G ND R T HL ++ GDT LG+D+++A N + E + G +LPDV+LV+K +PR + R+WKL ++E G+ K D + E DYE+FL LE DK+MR Q+NLYK A GGDAD ED E ++ E V ++ELLD +T+ Sbjct: 6 EASLPTILCCMCATPIKANAANMCVSCLKGQVDITEGIPKEVIIHQCRGCLKWSRPPWAVAELESRELLAICLKKINNLNKVKLIDANWVWTEPHSKRLKLKLTVQKEVLSKMILQQSFIVTFIVRNQQCDDCQKLFANQAWKAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTSNIESHPDGVDFFFVERNHALRFVDFLQECVPIKLKYSKKLISADNHSNTHNYKFSYMVDIAPVCKDDLVVLPLKLARLIGNISSLVLVQSVSSSIHVIDPFTTQTAEIDNEKYWRYPFKAIRSIKAMTEYTVLDSTPMAIPSGGGKPIRVN-RKTRLAEMEVVRNADFGVNDTRYTTTCHLANLFHVGDTALGYDLTTAVFNDNDLEPLEQAGITLPDVILVKKQFPRRIQKRP--------RNWKLKKME--------GVEVANPRKTDLSKEEMDYEQFLDDLEEDKEMRSQINLYKDDAAQENRRGGDADAMDEDDEGDEDYEDGDARRPAVGIDELLDDLTV 509
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Match: A0A7S2AZN0_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZN0_9STRA) HSP 1 Score: 493 bits (1269), Expect = 2.300e-162 Identity = 262/498 (52.61%), Postives = 347/498 (69.68%), Query Frame = 2 Query: 176 MCVLCIRTQVDITEGIATNLTIHQCRGCKRYLRPGWVECKLESRELMAVCLRKVNGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQAMAVTFVVRNQQCEGCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHSAHSQCTNIQTFRDGMDFYFGEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLVIAQRVTSAVQFIDPLTAQTADVTEEKYWRY-EFPSLLTSTRLVAYVVLGTEALP-EKARPSAPRGHRMRKARVAEVELARECDLGRNDDRVTVISHLGHILRAGDTVLGFDVSSANLP----EGEATGELGGSLPDVVLVRKVYPRNEDRESGGGGSKGDRHWKLGEL-----EKDGGDGGGGISEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKTGPAAAKAGGGDADEKMEDVEEMDEEEVRLEELLDGMTLDN 1636 MC C+++ VDIT+GI T L++++CRGC+++L+PGW+E LES EL+A+CL+K+ GL KVKLVDA+W+WTEPHS RLK+KL +QKEV N AVLQQA V +V+RNQQC C +T W AVVQVRQRVDHKRTF+YLEQL+LKH H+ C +IQTFRDGMDFYF E++ + RF DFL+ VVP ++K++KKL+S+DNHSN+FN+ +T+L + P+CKDDLV+LPK LA +LGNIS LV+ +RV++ + +DP T Q A E +++ F ++L++ RLV YVVLGTE L ++ S P + RK R+ EVELAR DLG ND R+T +SHLGH+LRAGDTVLG+D+ L E A E +LPD LVRK+Y G G + R WKL EL E++GG G E A KDYE+F+QQLE D++MRRQVNL+K A D +D EMDE+E+R+ ELL+ + LD+ Sbjct: 1 MCAQCLKSAVDITDGIPTQLSVYRCRGCQKWLKPGWIEADLESGELLALCLKKIRGLNKVKLVDASWVWTEPHSMRLKIKLNIQKEVMNAAVLQQAFVVEYVIRNQQCSDCQKQYTGGVWKAVVQVRQRVDHKRTFYYLEQLLLKHGVHTNCLSIQTFRDGMDFYFAERNQAVRFTDFLQTVVPIRMKNTKKLISSDNHSNLFNYKFTHLGVIAPLCKDDLVVLPKALALTLGNISPLVLIERVSTFIHLVDPFTCQRASFDIEHFYKVGAFGAVLSAARLVEYVVLGTEDLILDERESSTPTPTQKRKKRLVEVELARSADLGVNDTRLTCVSHLGHLLRAGDTVLGYDLERGALHSLDRETMAQVEKRRALPDSALVRKLYGVGS---GGDGETTKSRRWKLKELAVQEEERNGGKGA--------EDVAMKDYEQFMQQLEGDREMRRQVNLFK---ATDDDQDMDTAVATDDACEMDEQEIRIGELLEDLGLDD 484 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1069.661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1069.661.1 >prot_H-canaliculatus_F_contig1069.661.1 ID=prot_H-canaliculatus_F_contig1069.661.1|Name=mRNA_H-canaliculatus_F_contig1069.661.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=571bp MEVAPAMAAADGLAAPPQPEPEKQMPTVLCCMCSLPIPPNPTSMCVLCIRback to top mRNA from alignment at H-canaliculatus_F_contig1069:7264..11950+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1069.661.1 ID=mRNA_H-canaliculatus_F_contig1069.661.1|Name=mRNA_H-canaliculatus_F_contig1069.661.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4687bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1069:7264..11950+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1069:7264..11950+ >mRNA_H-canaliculatus_F_contig1069.661.1 ID=mRNA_H-canaliculatus_F_contig1069.661.1|Name=mRNA_H-canaliculatus_F_contig1069.661.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3426bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1069:7264..11950+ (Hapterophycus canaliculatus Oshoro5f female)back to top |