mRNA_H-canaliculatus_F_contig10594.575.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: D7FLP3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP3_ECTSI) HSP 1 Score: 351 bits (901), Expect = 7.650e-110 Identity = 187/235 (79.57%), Postives = 203/235 (86.38%), Query Frame = 1
Query: 13 VCNVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMP-------EFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQLAREENAWRRRNAQA 696
V NVGAPAWSILAVTFTKKASEEMR RVRK +GEDVSGQVALGTFHS CARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLT+I+KEM DIKEVKPN++RSSISKLKSQG+ P E M+ +S G+VG + AK +AEIY+ YQ RL+QSNALDFDDIILVALRLLR+D EVFR+VGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQ ARE+N RR AQA
Sbjct: 123 VRNVGAPAWSILAVTFTKKASEEMRARVRKTVGEDVSGQVALGTFHSICARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTDIIKEMGQDIKEVKPNMMRSSISKLKSQGLGPQDIAKKSEDMLERGKSTGFVGGKARHAKMVAEIYTKYQARLIQSNALDFDDIILVALRLLRQDKEVFRSVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQQAREDN---RRAAQA 354
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A7I9XYF2_9MYCO (ATP-dependent DNA helicase n=1 Tax=Mycobacterium botniense TaxID=84962 RepID=A0A7I9XYF2_9MYCO) HSP 1 Score: 160 bits (405), Expect = 1.940e-41 Identity = 89/202 (44.06%), Postives = 132/202 (65.35%), Query Frame = 1
Query: 43 ILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
ILA+TFT KA+ EMR RV + +G + + TFHS CAR+LR H +++PGL+ FSI+D +DSRRLL I++++ LDIK P ++ +IS LK++ + PE +A+ + A A+ +AE+Y YQRRL +NALDFDD+I + +L+ ++ + R++RHILVDE+QDTN QY +V E+V GR+A
Sbjct: 68 ILAITFTNKAAAEMRDRVVQLIGARAGRSLWVSTFHSMCARILRNHA----SLIPGLNSNFSIYDADDSRRLLQMIVRDIGLDIKRYSPRLLAHAISNLKNEVIDPEKAVANASDR-----ADDFARTVAEVYGEYQRRLRAANALDFDDLIGETVGILQSFPQIAQHYRRRFRHILVDEYQDTNHAQYVLVRELV--GRDA 258
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A3N5UTJ7_9CHLR (DNA helicase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UTJ7_9CHLR) HSP 1 Score: 151 bits (382), Expect = 6.510e-41 Identity = 81/201 (40.30%), Postives = 126/201 (62.69%), Query Frame = 1
Query: 25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEI 627
G W ILAVTFT KA++EM+ RV+ L + + LGTFHS CAR+LRR + LP ++ F IFDT+D R++ +++EMN++ K +P V ++IS+ K++ + P+ A+ Y +KR +Y YQ+RL+ SNA+DFDD+++ A RLL ++ V +++RH+LVDE+QDTN QY +V ++
Sbjct: 48 GVRPWQILAVTFTNKAAKEMQARVKSLLPDQAIEGIMLGTFHSICARILRREAEHLP-----IESNFVIFDTDDQERIVKTVIREMNINEKLYRPASVHAAISRAKNELIGPDEYPATT----YRDEIVKR------VYVEYQKRLIASNAVDFDDLLVYAARLLEDNPTVRDKYAQRFRHVLVDEFQDTNLAQYALVRQL 233
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: UPI00036A3C52 (DNA helicase PcrA n=1 Tax=Corynebacterium capitovis TaxID=131081 RepID=UPI00036A3C52) HSP 1 Score: 158 bits (400), Expect = 8.780e-41 Identity = 90/211 (42.65%), Postives = 130/211 (61.61%), Query Frame = 1
Query: 25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAK---RMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
G W ILA+TFT KA+ EMR RV + +G + ++ + TFHS C R+LR+ +VPGL+ FSI+D++DSRRLL I KE NLD K+ P + ++IS LK++ + PE + Y AA +A +Y+ YQRRL QSN+LDFDD+I +R+ + V R++RH+LVDE+QDTN QY+++ +V AG +A
Sbjct: 50 GVAPWQILAITFTNKAAAEMRERVAQLVGPEAE-RMWVATFHSVCVRILRQQAQ----LVPGLNSNFSIYDSDDSRRLLAMIAKETNLDPKKFSPRTLANAISALKNELIGPE--------EAYAEAARTHNPFDTAVAGVYADYQRRLRQSNSLDFDDLIGEVVRIFHQHPPVLDYYRRRFRHVLVDEYQDTNHAQYELIHALVGAGPDA 247
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A7X6RDL0_9CORY (ATP-dependent DNA helicase n=23 Tax=Corynebacterium TaxID=1716 RepID=A0A7X6RDL0_9CORY) HSP 1 Score: 158 bits (400), Expect = 1.040e-40 Identity = 86/208 (41.35%), Postives = 132/208 (63.46%), Query Frame = 1
Query: 25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
G W ILA+TFT KA+ EM+ RV + +G + +G++ + TFHS C R+LR+ +VPGL+ F+I+D++DSRRLL I K+ NLD+K+ P + + IS LK++ + P + + E +A++Y YQRRL +SNALDFDD+I +R+ +E +V R++RH+LVDE+QDTN QY+++ +V AG +A
Sbjct: 79 GVAPWQILAITFTNKAAAEMKERVSQLVGPE-AGRMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIAKDFNLDLKKFTPRTLANGISNLKNELIGPNEALTNAERTHNPFETT-----VAKVYVEYQRRLRRSNALDFDDLIGEVVRIFQEHPQVTDYYRRRFRHVLVDEYQDTNHAQYELIHTLVGAGPDA 276
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A376CN55_9CORY (ATP-dependent DNA helicase n=2 Tax=Corynebacterium TaxID=1716 RepID=A0A376CN55_9CORY) HSP 1 Score: 158 bits (399), Expect = 1.360e-40 Identity = 86/208 (41.35%), Postives = 131/208 (62.98%), Query Frame = 1
Query: 25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
G W ILA+TFT KA+ EM+ RV +G ++ + TFHS C R+LR+ +VPGL+ F+I+D++DSRRLLT I K+MNLD+K+ + ++IS LK++ + P+ AS ++ +AE+Y YQ+RL +SNALDFDD+I +R+ ++ +V R++RH+LVDE+QDTN QY++V +V G +A
Sbjct: 50 GVAPWQILAITFTNKAAAEMKERVSSLIGPQAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLTMIAKDMNLDLKKFSARTLANAISNLKNELIDPDQASASAQT-----TKNPFETTVAEVYVEYQKRLRESNALDFDDLIGEVVRIFKQHPQVTDYYRRRFRHVLVDEYQDTNHAQYELVHTLVGEGPDA 247
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: M1NWJ1_9CORY (ATP-dependent DNA helicase n=1 Tax=Corynebacterium halotolerans YIM 70093 = DSM 44683 TaxID=1121362 RepID=M1NWJ1_9CORY) HSP 1 Score: 158 bits (399), Expect = 1.450e-40 Identity = 90/210 (42.86%), Postives = 130/210 (61.90%), Query Frame = 1
Query: 25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRA--KRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
G W ILA+TFT KA+ EMR RV +G + ++ + TFHS C R+LR+ +VPGL+ F+I+D +DSRRLLT I K++NLD+K+ + ++IS LK++ PE +A E A K +A+++ YQRRL SNA+DFDD+I +R+ RE +V R++RH+LVDE+QDTN QY++V +V G EA
Sbjct: 69 GVAPWQILAITFTNKAAAEMRERVAGLIGP-AAERMWVATFHSICVRILRQQAQ----LVPGLNTNFTIYDGDDSRRLLTMIAKDLNLDLKKFTARTLNNAISNLKNELTGPEEALADAE-------ATKNPFETTVAKVFEEYQRRLRSSNAVDFDDLIGEVVRIFREHPQVTEYYRRRFRHVLVDEYQDTNHAQYELVSTLVGTGPEA 266
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: UPI001D0B0315 (UvrD-helicase domain-containing protein n=1 Tax=unclassified Corynebacterium TaxID=2624378 RepID=UPI001D0B0315) HSP 1 Score: 158 bits (399), Expect = 1.590e-40 Identity = 88/204 (43.14%), Postives = 129/204 (63.24%), Query Frame = 1
Query: 25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRA 636
G W ILA+TFT KA+ EMR RV +G V+ ++ + TFHS C R+LR+ VVPGL+ F+I+D++D+RRLLT I K+ +LD+K + ++IS LK++ + PE A +S +A++Y+ YQ RL Q+NA+DFDD+I +RLLRE +V R++RH+LVDE+QDTN QY++V +V A
Sbjct: 92 GVAPWQILAITFTNKAAAEMRERVAGLVGP-VAERMWVATFHSVCVRILRQQA----GVVPGLNSNFTIYDSDDARRLLTMIAKDKSLDLKRFSARTLANAISNLKNELIDPEDAAAEAQS-----TKNPFDTTVADVYAEYQTRLRQANAVDFDDLIGEVVRLLREHDDVAEYYRRRFRHVLVDEYQDTNHAQYELVSVLVGA 285
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: UPI0004BAE910 (DNA helicase PcrA n=1 Tax=Corynebacterium jeddahense TaxID=1414719 RepID=UPI0004BAE910) HSP 1 Score: 157 bits (398), Expect = 1.750e-40 Identity = 87/210 (41.43%), Postives = 130/210 (61.90%), Query Frame = 1
Query: 19 NVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
N G W ILA+TFT KA+ EM+ RV + +G D ++ + TFHS C R+LR+ +VPGL+ F+I+D++DSRRLL I K+ LD+K+ P + + IS K++ V PE +A E +A++Y+ YQRRL QSNALDFDD+I +R+ ++ +V R++RH+LVDE+QDTN QY+++ +V G +A
Sbjct: 47 NRGVAPWQILAITFTNKAAAEMKERVAQLVGPDAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIGKDFGLDLKKFSPRTLANGISNHKNELVGPEEALAEAEKTHNPFETT-----VAKVYAEYQRRLRQSNALDFDDLIGEVVRIFKQHPQVTEYYRRRFRHVLVDEYQDTNHAQYELIHTLVGDGADA 246
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A846SPJ0_9CORY (ATP-dependent DNA helicase n=15 Tax=Corynebacterium TaxID=1716 RepID=A0A846SPJ0_9CORY) HSP 1 Score: 157 bits (398), Expect = 1.860e-40 Identity = 87/210 (41.43%), Postives = 132/210 (62.86%), Query Frame = 1
Query: 19 NVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
N G W ILA+TFT KA+ EM+ RV + +G + ++ + TFHS C R+LR+ +VPGL+ F+I+D++DSRRLL I K+MNLD+K+ P V+ ++IS LK++ V P+ A + +A +++ YQRRL QSNALDFDD+I +R+ + +V R++RH+LVDE+QDTN QY+++ +V G +A
Sbjct: 66 NRGVAPWQILAITFTNKAAAEMKERVGQLVGPEAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIGKDMNLDLKKFSPRVLANAISNLKNELVDPDQAQAQAQRTHNPFETT-----VANVFAEYQRRLRQSNALDFDDLIGEVVRIFKTHPQVTEYYRRRFRHVLVDEYQDTNHAQYELIHTLVGDGPDA 265 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10594.575.1 >prot_H-canaliculatus_F_contig10594.575.1 ID=prot_H-canaliculatus_F_contig10594.575.1|Name=mRNA_H-canaliculatus_F_contig10594.575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=248bp MQTKVCNVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHback to top mRNA from alignment at H-canaliculatus_F_contig10594:1092..4468- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10594.575.1 ID=mRNA_H-canaliculatus_F_contig10594.575.1|Name=mRNA_H-canaliculatus_F_contig10594.575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3377bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10594:1092..4468- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10594:1092..4468- >mRNA_H-canaliculatus_F_contig10594.575.1 ID=mRNA_H-canaliculatus_F_contig10594.575.1|Name=mRNA_H-canaliculatus_F_contig10594.575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1488bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10594:1092..4468- (Hapterophycus canaliculatus Oshoro5f female)back to top |