mRNA_H-canaliculatus_F_contig10594.575.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10594.575.1
Unique NamemRNA_H-canaliculatus_F_contig10594.575.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: D7FLP3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP3_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 7.650e-110
Identity = 187/235 (79.57%), Postives = 203/235 (86.38%), Query Frame = 1
Query:   13 VCNVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMP-------EFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQLAREENAWRRRNAQA 696
            V NVGAPAWSILAVTFTKKASEEMR RVRK +GEDVSGQVALGTFHS CARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLT+I+KEM  DIKEVKPN++RSSISKLKSQG+ P       E M+   +S G+VG   + AK +AEIY+ YQ RL+QSNALDFDDIILVALRLLR+D EVFR+VGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQ ARE+N   RR AQA
Sbjct:  123 VRNVGAPAWSILAVTFTKKASEEMRARVRKTVGEDVSGQVALGTFHSICARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTDIIKEMGQDIKEVKPNMMRSSISKLKSQGLGPQDIAKKSEDMLERGKSTGFVGGKARHAKMVAEIYTKYQARLIQSNALDFDDIILVALRLLRQDKEVFRSVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREAQQAREDN---RRAAQA 354          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A7I9XYF2_9MYCO (ATP-dependent DNA helicase n=1 Tax=Mycobacterium botniense TaxID=84962 RepID=A0A7I9XYF2_9MYCO)

HSP 1 Score: 160 bits (405), Expect = 1.940e-41
Identity = 89/202 (44.06%), Postives = 132/202 (65.35%), Query Frame = 1
Query:   43 ILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
            ILA+TFT KA+ EMR RV + +G      + + TFHS CAR+LR H     +++PGL+  FSI+D +DSRRLL  I++++ LDIK   P ++  +IS LK++ + PE  +A+   +     A   A+ +AE+Y  YQRRL  +NALDFDD+I   + +L+   ++ +   R++RHILVDE+QDTN  QY +V E+V  GR+A
Sbjct:   68 ILAITFTNKAAAEMRDRVVQLIGARAGRSLWVSTFHSMCARILRNHA----SLIPGLNSNFSIYDADDSRRLLQMIVRDIGLDIKRYSPRLLAHAISNLKNEVIDPEKAVANASDR-----ADDFARTVAEVYGEYQRRLRAANALDFDDLIGETVGILQSFPQIAQHYRRRFRHILVDEYQDTNHAQYVLVRELV--GRDA 258          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A3N5UTJ7_9CHLR (DNA helicase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5UTJ7_9CHLR)

HSP 1 Score: 151 bits (382), Expect = 6.510e-41
Identity = 81/201 (40.30%), Postives = 126/201 (62.69%), Query Frame = 1
Query:   25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEI 627
            G   W ILAVTFT KA++EM+ RV+  L +     + LGTFHS CAR+LRR  + LP     ++  F IFDT+D  R++  +++EMN++ K  +P  V ++IS+ K++ + P+   A+     Y    +KR      +Y  YQ+RL+ SNA+DFDD+++ A RLL ++  V     +++RH+LVDE+QDTN  QY +V ++
Sbjct:   48 GVRPWQILAVTFTNKAAKEMQARVKSLLPDQAIEGIMLGTFHSICARILRREAEHLP-----IESNFVIFDTDDQERIVKTVIREMNINEKLYRPASVHAAISRAKNELIGPDEYPATT----YRDEIVKR------VYVEYQKRLIASNAVDFDDLLVYAARLLEDNPTVRDKYAQRFRHVLVDEFQDTNLAQYALVRQL 233          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: UPI00036A3C52 (DNA helicase PcrA n=1 Tax=Corynebacterium capitovis TaxID=131081 RepID=UPI00036A3C52)

HSP 1 Score: 158 bits (400), Expect = 8.780e-41
Identity = 90/211 (42.65%), Postives = 130/211 (61.61%), Query Frame = 1
Query:   25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAK---RMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
            G   W ILA+TFT KA+ EMR RV + +G +   ++ + TFHS C R+LR+       +VPGL+  FSI+D++DSRRLL  I KE NLD K+  P  + ++IS LK++ + PE        + Y  AA         +A +Y+ YQRRL QSN+LDFDD+I   +R+  +   V     R++RH+LVDE+QDTN  QY+++  +V AG +A
Sbjct:   50 GVAPWQILAITFTNKAAAEMRERVAQLVGPEAE-RMWVATFHSVCVRILRQQAQ----LVPGLNSNFSIYDSDDSRRLLAMIAKETNLDPKKFSPRTLANAISALKNELIGPE--------EAYAEAARTHNPFDTAVAGVYADYQRRLRQSNSLDFDDLIGEVVRIFHQHPPVLDYYRRRFRHVLVDEYQDTNHAQYELIHALVGAGPDA 247          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A7X6RDL0_9CORY (ATP-dependent DNA helicase n=23 Tax=Corynebacterium TaxID=1716 RepID=A0A7X6RDL0_9CORY)

HSP 1 Score: 158 bits (400), Expect = 1.040e-40
Identity = 86/208 (41.35%), Postives = 132/208 (63.46%), Query Frame = 1
Query:   25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
            G   W ILA+TFT KA+ EM+ RV + +G + +G++ + TFHS C R+LR+       +VPGL+  F+I+D++DSRRLL  I K+ NLD+K+  P  + + IS LK++ + P   + + E              +A++Y  YQRRL +SNALDFDD+I   +R+ +E  +V     R++RH+LVDE+QDTN  QY+++  +V AG +A
Sbjct:   79 GVAPWQILAITFTNKAAAEMKERVSQLVGPE-AGRMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIAKDFNLDLKKFTPRTLANGISNLKNELIGPNEALTNAERTHNPFETT-----VAKVYVEYQRRLRRSNALDFDDLIGEVVRIFQEHPQVTDYYRRRFRHVLVDEYQDTNHAQYELIHTLVGAGPDA 276          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A376CN55_9CORY (ATP-dependent DNA helicase n=2 Tax=Corynebacterium TaxID=1716 RepID=A0A376CN55_9CORY)

HSP 1 Score: 158 bits (399), Expect = 1.360e-40
Identity = 86/208 (41.35%), Postives = 131/208 (62.98%), Query Frame = 1
Query:   25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
            G   W ILA+TFT KA+ EM+ RV   +G     ++ + TFHS C R+LR+       +VPGL+  F+I+D++DSRRLLT I K+MNLD+K+     + ++IS LK++ + P+   AS ++             +AE+Y  YQ+RL +SNALDFDD+I   +R+ ++  +V     R++RH+LVDE+QDTN  QY++V  +V  G +A
Sbjct:   50 GVAPWQILAITFTNKAAAEMKERVSSLIGPQAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLTMIAKDMNLDLKKFSARTLANAISNLKNELIDPDQASASAQT-----TKNPFETTVAEVYVEYQKRLRESNALDFDDLIGEVVRIFKQHPQVTDYYRRRFRHVLVDEYQDTNHAQYELVHTLVGEGPDA 247          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: M1NWJ1_9CORY (ATP-dependent DNA helicase n=1 Tax=Corynebacterium halotolerans YIM 70093 = DSM 44683 TaxID=1121362 RepID=M1NWJ1_9CORY)

HSP 1 Score: 158 bits (399), Expect = 1.450e-40
Identity = 90/210 (42.86%), Postives = 130/210 (61.90%), Query Frame = 1
Query:   25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRA--KRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
            G   W ILA+TFT KA+ EMR RV   +G   + ++ + TFHS C R+LR+       +VPGL+  F+I+D +DSRRLLT I K++NLD+K+     + ++IS LK++   PE  +A  E       A K      +A+++  YQRRL  SNA+DFDD+I   +R+ RE  +V     R++RH+LVDE+QDTN  QY++V  +V  G EA
Sbjct:   69 GVAPWQILAITFTNKAAAEMRERVAGLIGP-AAERMWVATFHSICVRILRQQAQ----LVPGLNTNFTIYDGDDSRRLLTMIAKDLNLDLKKFTARTLNNAISNLKNELTGPEEALADAE-------ATKNPFETTVAKVFEEYQRRLRSSNAVDFDDLIGEVVRIFREHPQVTEYYRRRFRHVLVDEYQDTNHAQYELVSTLVGTGPEA 266          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: UPI001D0B0315 (UvrD-helicase domain-containing protein n=1 Tax=unclassified Corynebacterium TaxID=2624378 RepID=UPI001D0B0315)

HSP 1 Score: 158 bits (399), Expect = 1.590e-40
Identity = 88/204 (43.14%), Postives = 129/204 (63.24%), Query Frame = 1
Query:   25 GAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRA 636
            G   W ILA+TFT KA+ EMR RV   +G  V+ ++ + TFHS C R+LR+       VVPGL+  F+I+D++D+RRLLT I K+ +LD+K      + ++IS LK++ + PE   A  +S             +A++Y+ YQ RL Q+NA+DFDD+I   +RLLRE  +V     R++RH+LVDE+QDTN  QY++V  +V A
Sbjct:   92 GVAPWQILAITFTNKAAAEMRERVAGLVGP-VAERMWVATFHSVCVRILRQQA----GVVPGLNSNFTIYDSDDARRLLTMIAKDKSLDLKRFSARTLANAISNLKNELIDPEDAAAEAQS-----TKNPFDTTVADVYAEYQTRLRQANAVDFDDLIGEVVRLLREHDDVAEYYRRRFRHVLVDEYQDTNHAQYELVSVLVGA 285          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: UPI0004BAE910 (DNA helicase PcrA n=1 Tax=Corynebacterium jeddahense TaxID=1414719 RepID=UPI0004BAE910)

HSP 1 Score: 157 bits (398), Expect = 1.750e-40
Identity = 87/210 (41.43%), Postives = 130/210 (61.90%), Query Frame = 1
Query:   19 NVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
            N G   W ILA+TFT KA+ EM+ RV + +G D   ++ + TFHS C R+LR+       +VPGL+  F+I+D++DSRRLL  I K+  LD+K+  P  + + IS  K++ V PE  +A  E              +A++Y+ YQRRL QSNALDFDD+I   +R+ ++  +V     R++RH+LVDE+QDTN  QY+++  +V  G +A
Sbjct:   47 NRGVAPWQILAITFTNKAAAEMKERVAQLVGPDAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIGKDFGLDLKKFSPRTLANGISNHKNELVGPEEALAEAEKTHNPFETT-----VAKVYAEYQRRLRQSNALDFDDLIGEVVRIFKQHPQVTEYYRRRFRHVLVDEYQDTNHAQYELIHTLVGDGADA 246          
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Match: A0A846SPJ0_9CORY (ATP-dependent DNA helicase n=15 Tax=Corynebacterium TaxID=1716 RepID=A0A846SPJ0_9CORY)

HSP 1 Score: 157 bits (398), Expect = 1.860e-40
Identity = 87/210 (41.43%), Postives = 132/210 (62.86%), Query Frame = 1
Query:   19 NVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFHSACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKEVKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTYQRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNGPQYDIVLEIVRAGREA 648
            N G   W ILA+TFT KA+ EM+ RV + +G +   ++ + TFHS C R+LR+       +VPGL+  F+I+D++DSRRLL  I K+MNLD+K+  P V+ ++IS LK++ V P+   A  +              +A +++ YQRRL QSNALDFDD+I   +R+ +   +V     R++RH+LVDE+QDTN  QY+++  +V  G +A
Sbjct:   66 NRGVAPWQILAITFTNKAAAEMKERVGQLVGPEAE-RMWVATFHSVCVRILRQQAQ----LVPGLNTNFTIYDSDDSRRLLGMIGKDMNLDLKKFSPRVLANAISNLKNELVDPDQAQAQAQRTHNPFETT-----VANVFAEYQRRLRQSNALDFDDLIGEVVRIFKTHPQVTEYYRRRFRHVLVDEYQDTNHAQYELIHTLVGDGPDA 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10594.575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP3_ECTSI7.650e-11079.57DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7I9XYF2_9MYCO1.940e-4144.06ATP-dependent DNA helicase n=1 Tax=Mycobacterium b... [more]
A0A3N5UTJ7_9CHLR6.510e-4140.30DNA helicase (Fragment) n=1 Tax=Chloroflexi bacter... [more]
UPI00036A3C528.780e-4142.65DNA helicase PcrA n=1 Tax=Corynebacterium capitovi... [more]
A0A7X6RDL0_9CORY1.040e-4041.35ATP-dependent DNA helicase n=23 Tax=Corynebacteriu... [more]
A0A376CN55_9CORY1.360e-4041.35ATP-dependent DNA helicase n=2 Tax=Corynebacterium... [more]
M1NWJ1_9CORY1.450e-4042.86ATP-dependent DNA helicase n=1 Tax=Corynebacterium... [more]
UPI001D0B03151.590e-4043.14UvrD-helicase domain-containing protein n=1 Tax=un... [more]
UPI0004BAE9101.750e-4041.43DNA helicase PcrA n=1 Tax=Corynebacterium jeddahen... [more]
A0A846SPJ0_9CORY1.860e-4041.43ATP-dependent DNA helicase n=15 Tax=Corynebacteriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10594contigH-canaliculatus_F_contig10594:1092..4468 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.9
Seed ortholog evalue4.9e-94
Seed eggNOG ortholog2880.D7FLP3
KEGG koko:K03657
KEGG Pathwayko03420,ko03430,map03420,map03430
EggNOG free text desc.ATP-dependent DNA helicase activity
EggNOG OGsCOG0210@1,KOG2108@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons4
Model size746
Cds size744
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10594.575.1prot_H-canaliculatus_F_contig10594.575.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10594 1092..4468 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928713.613846-CDS-H-canaliculatus_F_contig10594:1091..13031622928713.613846-CDS-H-canaliculatus_F_contig10594:1091..1303Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10594 1092..1303 -
1696845535.2838712-CDS-H-canaliculatus_F_contig10594:1091..13031696845535.2838712-CDS-H-canaliculatus_F_contig10594:1091..1303Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10594 1092..1303 -
1622928713.6244545-CDS-H-canaliculatus_F_contig10594:1917..21491622928713.6244545-CDS-H-canaliculatus_F_contig10594:1917..2149Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10594 1918..2149 -
1696845535.3025117-CDS-H-canaliculatus_F_contig10594:1917..21491696845535.3025117-CDS-H-canaliculatus_F_contig10594:1917..2149Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10594 1918..2149 -
1622928713.634554-CDS-H-canaliculatus_F_contig10594:2922..30931622928713.634554-CDS-H-canaliculatus_F_contig10594:2922..3093Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10594 2923..3093 -
1696845535.3131378-CDS-H-canaliculatus_F_contig10594:2922..30931696845535.3131378-CDS-H-canaliculatus_F_contig10594:2922..3093Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10594 2923..3093 -
1622928713.6456275-CDS-H-canaliculatus_F_contig10594:4339..44681622928713.6456275-CDS-H-canaliculatus_F_contig10594:4339..4468Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10594 4340..4468 -
1696845535.323238-CDS-H-canaliculatus_F_contig10594:4339..44681696845535.323238-CDS-H-canaliculatus_F_contig10594:4339..4468Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10594 4340..4468 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10594.575.1

>prot_H-canaliculatus_F_contig10594.575.1 ID=prot_H-canaliculatus_F_contig10594.575.1|Name=mRNA_H-canaliculatus_F_contig10594.575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=248bp
MQTKVCNVGAPAWSILAVTFTKKASEEMRVRVRKALGEDVSGQVALGTFH
SACARLLRRHGDALPAVVPGLDGRFSIFDTEDSRRLLTEIMKEMNLDIKE
VKPNVVRSSISKLKSQGVMPEFMMASVESKGYVGAALKRAKRMAEIYSTY
QRRLVQSNALDFDDIILVALRLLREDGEVFRAVGRQYRHILVDEWQDTNG
PQYDIVLEIVRAGREAQLAREENAWRRRNAQAQEQAQTVRREMDGRDP
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mRNA from alignment at H-canaliculatus_F_contig10594:1092..4468-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10594.575.1 ID=mRNA_H-canaliculatus_F_contig10594.575.1|Name=mRNA_H-canaliculatus_F_contig10594.575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3377bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10594:1092..4468- (Hapterophycus canaliculatus Oshoro5f female)
ATGCAAACAAAGGTGTGTAACGTCGGCGCGCCGGCTTGGTCTATCCTTGC CGTGACGTTCACCAAGAAAGCCTCGGAGGAGATGAGGGTGCGGGTTCGCA AGGCATTGGGGGAGGACGTCTCCGGTCAGGTGCGCGATCTCTCCTTCCCT CTACACAAGCGCGTACATATACGAGCACAATTGTGTTTTACTCTCGTCAT GTATCTCGCGGGAGGGTCCGTGTGGACAAGACCACGCTGAGGTGCGCGAG AATCCGAAATGGGTCAGGGTTACAACTGCACGTCCCACTCCTGCACGATC CTCGGTGCAAATGTTCGGGGTACAACGGGGGGTGGGAGCGGGAGAGAGGG AGGCTAAACTACCGTGAAATACTCCGTGAAACATTGGCAACCCCAATACG CTGGAAAAGTCTCTGGGTCAGGCTTTTCCGGCCCCGACTCGTTCGCAACT GTGGCACCCCCCACGCCGTTCCCCCTCCTCTCTGGGTTACATCCTTTTCC CCACCGTAGCTCCTCTCTCCCGTCGCCGAGACTGCGCAGAGAGAAGCGAT GTTGGGGGGTGGGGGGGGGGGGGGTTACTGTTGGGACAGGTACGCAGTGC TCCATTGGATGTGCCGAAAAAAATGTGGTTAATCGTCACTAACTGTATAA TGGTTAATACAACCCTTTGCCGATCTACCGCTTGCGTCATTTGTCTTTCG TGGTCGTGAAACAGGGCTCATGCTCTTGGGTAGTAAGTGGTAGAGGCCCC TCTCCAATAGAACAAAGACCGCCTGTCTTATAATACACGAAGTATATCTT ATGTGACGTTAAATTACATCACGTCACAGGGGAAACTGTTGGAAGTAACC TTGTACGCACAATCCACCAATCGACATTTTGTACACAGCAGTTCATCACA CGCACCCAGCGCTGAGTTTCATAGCTTTTCCCAGTTAATGTTTTTGTCCC AACTGTAGACAATGAACCCTCATCGTTTGGAACTAAATGGAAGTCTCTAG CGACGCCTCGCTCGACGTACCTCAGAAGGTGTTGATACGGAGTTTAAAGT TAGAAAGACCGCCACCTGCGCGATTCTTGTTCCAATTTCTGTTCCGATCA ATCTTTGTACAAGAAAGCCCACCGACCCACACAGGAGCCCAAAGTCGAAC CTGAATCTTCTTCTGGTGCCATGTTAAAGGCAGAGCTGACCTCACGCAAA CGTTGTGTCTGCTGACAGACGATTCCTAGCTTTAGCGTCCCCTCCTCACT CAGGCACCAGGAAGCAATTCCCGGGGACGGCTTCGTCGCCATTCGCACAC CACCTGCCGCGGTGCCCTGAGTACGAACGCCCCGCTTGTCTCCTCTTTCC TCCGCCTTGACGCCGCTCGCCGCAGGTGGCCCTGGGAACGTTCCACAGCG CCTGCGCGCGGCTGCTGCGGAGGCACGGAGACGCGCTGCCGGCCGTCGTC CCCGGCCTGGACGGAAGGTTTTCCATCTTCGACACCGAGGATTCCCGTAG GCTGCTCACGGAAATCATGAAGGAAATGAATCTGGACATCAAGGAGGTAG GACAGCTTGGGTCGGGGGCCTCGGGGGTGGAGGTGGACTCGATTCCGGTG AAGTCGGGCCGAGCGTGGCAGGGAGGGGACTTCGAGGTTGGGTCGGATGT GGTTGGGGGTGCGGTCGTGTGTGTGTGTACTTGTGCGGCGATGTGGTTGT TGGGGTCTGTGATCGTGGTGAAAGTGTGAGCAGGTCTGATATAGTGTGGC ATGGTGTAGTGTGGTGTGGGGTGTGCGGCATGGCACGATAAAGCCTGCTT TGGTATGTTGTGGCGTGAATATCCGTTTCCACTATTCTCTTCGCCGCTTC GCCGGGAGGTGTTGTCCGTTGAGACGCCGAGGGTTTTCCACTCTCCGCTG ATGCACGCGGCAAGAGTTGGTTCTCTTGGGATACCGAAGGGCGCTAGTTG CGAAGAAAGGGATGAAAAAGGTGAGGCGAGGAGGACCACAAAATGAGGTC GTGGAGTTTGGGTTCGGCAGGCATGATCCCTTTGCCGGTCTATCTGTGTT CTCTCTCGCTTTGGTGCCAGATGTTGGTAGGCTGTTGTCTGTCCGTCTGT TCGCCTGTCCATCTGCCTGGCTGCCTGGCTGCCTGCCTGCCTGCCTGGCT GCGCGCCTATCTATCTATCTATCTATCTATCTTTCTTATATTTCTGTCCG TTTGTCTATCTCTCTGTCTGTCTTTCTGTCTCTCGTTTGTCTCTGTCTCA CTTTCTCGCTCTGGGTCGCCCTTTCCCTCCCTCCCGCACCCACTCGCCCT CGGCCTCTACTTGCGGCAGGTTAAGCCCAACGTGGTACGGTCATCGATCT CCAAGCTCAAGAGCCAGGGCGTGATGCCTGAATTTATGATGGCGAGCGTG GAGAGCAAGGGCTACGTGGGTGCGGCCTTGAAGCGCGCCAAGAGGATGGC AGAGATCTACAGCACCTACCAGAGGAGACTGGTCCAGAGCAACGCGCTCG ACTTCGACGACATCATCCTCGTCGCATTACGGCTTCTGCGGGAGGACGGG GGTAAGGCACTTGACTTTCTTGCTCGGTTTCCCGTCGCTTGATGCGTCGG TTGGCGTTTTTGTCAGCGCCTTGGTTCCTTCACGTGTCATCCATGTGTGT CGGTGTTCGTCTGTCTCATCTATCATTGTGTTTGCTGTTGGCTCCATGTT CTTTCGTCGCCCTTTTTTTGCGCTCTTCTTCGTGGATCGCACACAAAAGC AGCTCCTTTCTGACCGACTTGCCTTCCTGTCAAGACCGGTGTAGCGTTTC ACACGCGTTAGGGGGCTGGTGAATCACTTCAAGTCCTACCACCGCGAAGA TACTCTCTCTGTCTCTCTCCCCCTCTCTCCCTCCCTCTCTCCCTCCCTCT CTCCCTCCCTCTCTCCCTCCCTCTCTCCCTCCCTCTCTCCCTCTCTCGCG CGCACGCGCCCACGGAAGGGGCAGTCTCAGCGTCCGTAACGGACACAATA TGTCGTGAAACCACCACCACACGATCCCAATTTTCTATCCGTCGATTTGT GGTACATAGTCCTTCCTCGCCAGGAAGACCATGCCTCCGACTCGCACACA CGTGACACAACGGATACACACACACACACACAAACACAAACACAAACACA CGCGCGCGCGCACAGAGGTTTTCCGGGCGGTCGGGCGGCAGTACCGGCAC ATCCTCGTGGACGAGTGGCAAGACACGAACGGCCCGCAGTACGACATCGT CCTAGAGATCGTACGCGCCGGACGCGAGGCACAGCTAGCTCGCGAGGAGA ACGCGTGGCGCCGGCGCAACGCTCAAGCCCAAGAACAGGCGCAGACGGTG AGACGGGAGATGGACGGCAGAGATCCG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10594:1092..4468-

>mRNA_H-canaliculatus_F_contig10594.575.1 ID=mRNA_H-canaliculatus_F_contig10594.575.1|Name=mRNA_H-canaliculatus_F_contig10594.575.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1488bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10594:1092..4468- (Hapterophycus canaliculatus Oshoro5f female)
ATGCAAACAAAGGTGTGTAACGTCGGCGCGCCGGCTTGGTCTATCCTTGC
CGTGACGTTCACCAAGAAAGCCTCGGAGGAGATGAGGGTGCGGGTTCGCA
AGGCATTGGGGGAGGACGTCTCCGGTCAGATGCAAACAAAGGTGTGTAAC
GTCGGCGCGCCGGCTTGGTCTATCCTTGCCGTGACGTTCACCAAGAAAGC
CTCGGAGGAGATGAGGGTGCGGGTTCGCAAGGCATTGGGGGAGGACGTCT
CCGGTCAGGTGGCCCTGGGAACGTTCCACAGCGCCTGCGCGCGGCTGCTG
CGGAGGCACGGAGACGCGCTGCCGGCCGTCGTCCCCGGCCTGGACGGAAG
GTTTTCCATCTTCGACACCGAGGATTCCCGTAGGCTGCTCACGGAAATCA
TGAAGGAAATGAATCTGGACATCAAGGAGGTGGCCCTGGGAACGTTCCAC
AGCGCCTGCGCGCGGCTGCTGCGGAGGCACGGAGACGCGCTGCCGGCCGT
CGTCCCCGGCCTGGACGGAAGGTTTTCCATCTTCGACACCGAGGATTCCC
GTAGGCTGCTCACGGAAATCATGAAGGAAATGAATCTGGACATCAAGGAG
GTTAAGCCCAACGTGGTACGGTCATCGATCTCCAAGCTCAAGAGCCAGGG
CGTGATGCCTGAATTTATGATGGCGAGCGTGGAGAGCAAGGGCTACGTGG
GTGCGGCCTTGAAGCGCGCCAAGAGGATGGCAGAGATCTACAGCACCTAC
CAGAGGAGACTGGTCCAGAGCAACGCGCTCGACTTCGACGACATCATCCT
CGTCGCATTACGGCTTCTGCGGGAGGACGGGGGTTAAGCCCAACGTGGTA
CGGTCATCGATCTCCAAGCTCAAGAGCCAGGGCGTGATGCCTGAATTTAT
GATGGCGAGCGTGGAGAGCAAGGGCTACGTGGGTGCGGCCTTGAAGCGCG
CCAAGAGGATGGCAGAGATCTACAGCACCTACCAGAGGAGACTGGTCCAG
AGCAACGCGCTCGACTTCGACGACATCATCCTCGTCGCATTACGGCTTCT
GCGGGAGGACGGGGAGGTTTTCCGGGCGGTCGGGCGGCAGTACCGGCACA
TCCTCGTGGACGAGTGGCAAGACACGAACGGCCCGCAGTACGACATCGTC
CTAGAGATCGTACGCGCCGGACGCGAGGCACAGCTAGCTCGCGAGGAGAA
CGCGTGGCGCCGGCGCAACGCTCAAGCCCAAGAACAGGCGCAGACGGTGA
GACGGGAGATGGACGGCAGAGATCCGAGGTTTTCCGGGCGGTCGGGCGGC
AGTACCGGCACATCCTCGTGGACGAGTGGCAAGACACGAACGGCCCGCAG
TACGACATCGTCCTAGAGATCGTACGCGCCGGACGCGAGGCACAGCTAGC
TCGCGAGGAGAACGCGTGGCGCCGGCGCAACGCTCAAGCCCAAGAACAGG
CGCAGACGGTGAGACGGGAGATGGACGGCAGAGATCCG
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