prot_H-canaliculatus_M_contigs9995.2.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_M_contigs9995.2.1
Unique Name	prot_H-canaliculatus_M_contigs9995.2.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length	243

Homology

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BLAST of mRNA_H-canaliculatus_M_contigs9995.2.1 vs. uniprot
Match: D7FWM3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM3_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 2.570e-55
Identity = 174/245 (71.02%), Postives = 186/245 (75.92%), Query Frame = 0

Query:    1 GHGAGASELNPAALAHEAAAAGRLGQWDRVSPLVAKATRSPDLRGVAGARLYAALISAASACGKPRRGLEVFEEMLETSSSLSPSXXXXXXXXXXXXXXXXXXXXXRASLASSGDGVEWSDDVRGQGVDDSPSADEGGLARVDGGXXXXXXXXDTATFLAALDACAAVGGDESVSLAVGVTKQAAXXXXXXXXXXXXXXXX--AKARLSSRQLAAVLSKAAEVCAAAGKESTAAALAAKAAQLSG 243
            G G G  ELNP ALAHEAAAAGRLGQWDRVSPL+AKA RSPDLRGVAG RLYAALI+AA+ACGKPRRGLEVF+EM+E S S       XXXXXXXXXXXX       A+ A    GVEWSD + G+       A E   +R    XXXXXXXX   TFLAALDACAAVGG+ESV+LA+GVTK A XXXXXXXXXXXXXXXX   K RLSSRQLAAVLSKA EVCAA GKESTA ALAAKA QL G
Sbjct:  820 GGGGGVRELNPGALAHEAAAAGRLGQWDRVSPLLAKAMRSPDLRGVAGCRLYAALITAAAACGKPRRGLEVFQEMVEESRS------GXXXXXXXXXXXXVDAAVLGAAAAVVSGGVEWSDSMSGEDGTTGEVAMEEAFSRSGXXXXXXXXXXXXXTFLAALDACAAVGGEESVTLAIGVTKDAXXXXXXXXXXXXXXXXXDAKKPRLSSRQLAAVLSKAGEVCAAVGKESTAIALAAKAEQLVG 1058

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_M_contigs9995.2.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_M_contigs9995.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1

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x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FWM3_ECTSI	2.570e-55	71.02	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 51..79 e-value: 0.003 score: 15.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..152

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_M_contigs9995	contig	H-canaliculatus_M_contigs9995:1796..2524 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_M_contigs9995.2.1	mRNA_H-canaliculatus_M_contigs9995.2.1	Hapterophycus canaliculatus Oshoro7m male	mRNA	H-canaliculatus_M_contigs9995 1796..2524 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_M_contigs9995.2.1 ID=prot_H-canaliculatus_M_contigs9995.2.1|Name=mRNA_H-canaliculatus_M_contigs9995.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=243bp
GHGAGASELNPAALAHEAAAAGRLGQWDRVSPLVAKATRSPDLRGVAGAR
LYAALISAASACGKPRRGLEVFEEMLETSSSLSPSSSGAAADGGGALGAA
AAAAAARASLASSGDGVEWSDDVRGQGVDDSPSADEGGLARVDGGGGRRL
PPPDTATFLAALDACAAVGGDESVSLAVGVTKQAAAAARELQERGGSGNG
GAKARLSSRQLAAVLSKAAEVCAAAGKESTAAALAAKAAQLSG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat