prot_H-canaliculatus_M_contigs9701.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9701.1.1
Unique Nameprot_H-canaliculatus_M_contigs9701.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length63
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5JT61_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT61_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 9.780e-17
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFP 60
            +RCD+G E  ++E  T C+DSGI IEY AT+TP QNGVSE DGQTL  I R L+K+G FP
Sbjct:  232 IRCDRGRENVANEFTTYCMDSGITIEYAATNTPQQNGVSERDGQTLTTITRCLMKNGAFP 291          
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5JCI9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI9_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 6.740e-15
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFP 60
            LRCDKG E P +E +  C +S I +E+ AT+TP + GVSE DGQTLA + R L++DG FP
Sbjct:  183 LRCDKGGENPGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFP 242          
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5KEV0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEV0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 7.480e-15
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFP 60
            LRCDKG E   +E +  C +S I +E+ AT+TP + GVSE DGQTLA + R L++DG FP
Sbjct:   13 LRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFP 72          
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5JAY3_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAY3_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.390e-14
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFP 60
            LRCDKG E   +E +  C +S I +E+ AT+TP + GVSE DGQTLA + R L++DG FP
Sbjct:  114 LRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFP 173          
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 1.630e-14
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFPLSI 63
            +RCDKG E    E +  C +S I +EY AT+TP Q GVSE DGQTLA + R L+KDG FP S+
Sbjct:  171 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSEGDGQTLAGVTRCLLKDGDFPPSM 233          
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.960e-14
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFP 60
            +RC+ G E  ++E     +DS I IEY AT+TP QNGVSE DGQTL  I RYL+KDG FP
Sbjct:  434 IRCESGGENVANEFTKYFMDSDITIEYAATNTPQQNGVSERDGQTLTTITRYLMKDGAFP 493          
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.690e-14
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFPLSI 63
            +RCDKG E    E +  C +S I +EY AT+TP Q GVSE DGQTLA + R L+KDG FP S+
Sbjct:  512 IRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSM 574          
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5K611_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K611_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 3.500e-14
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFPLSI 63
            +RCDKG E    E +  C +S I +EY AT+TP Q+GVSE DGQTL  + R L+KDG FP S+
Sbjct:  304 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQSGVSERDGQTLTGVTRCLLKDGDFPPSM 366          
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5K5H2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H2_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 3.630e-14
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFPLSI 63
            +RCDKG E    E +  C +S I +EY AT+TP Q GVSE DGQTLA + R L+KDG FP S+
Sbjct:   37 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSM 99          
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 3.650e-14
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIVRYLIKDGTFPLSI 63
            +RCDKG E    E +  C +S I +EY AT+TP Q GVSE DGQTLA + R L+KDG FP S+
Sbjct:  495 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSM 557          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9701.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT61_9PHAE9.780e-1761.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JCI9_9PHAE6.740e-1555.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEV0_9PHAE7.480e-1553.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JAY3_9PHAE1.390e-1453.33Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KZ34_9PHAE1.630e-1455.56Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JYD3_9PHAE1.960e-1458.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J8P7_9PHAE2.690e-1455.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K611_9PHAE3.500e-1453.97Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K5H2_9PHAE3.630e-1455.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVF6_9PHAE3.650e-1455.56Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..62
e-value: 7.9E-9
score: 37.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..63
score: 8.665076
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9701contigH-canaliculatus_M_contigs9701:6..194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9701.1.1mRNA_H-canaliculatus_M_contigs9701.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9701 6..194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9701.1.1 ID=prot_H-canaliculatus_M_contigs9701.1.1|Name=mRNA_H-canaliculatus_M_contigs9701.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=63bp
LRCDKGTEYPSDESKTICLDSGINIEYTATHTPLQNGVSEHDGQTLAKIV
RYLIKDGTFPLSI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR001584Integrase_cat-core
IPR036397RNaseH_sf