prot_H-canaliculatus_M_contigs944.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs944.1.1
Unique Nameprot_H-canaliculatus_M_contigs944.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length246
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs944.1.1 vs. uniprot
Match: D7FVI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI0_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.660e-56
Identity = 118/205 (57.56%), Postives = 145/205 (70.73%), Query Frame = 0 
Query:   44 VAATATGYNSRTFFSAEEASPRGGERATSMPAVKSASYDRSDDSSGDRGLSCRSSKLGATGIPACSPDTPDSSVLA---STRAEGAGGSDDDVTDTDEGVMAKLKDFTEIARRTAAHNEVMRLREHEMAWAARTASEMSLRSEMCALKDDLSRVSGNNAVLQRRCDVLQQENAELGERFAAIAEEKRQVESKARRLLRSDRYRGY 245
            VA T+TG +    +S E          T+   +  ASY R D ++ + G   R +    TG  AC P     SV A   ++RA GA  SDDD+TDTDEGVMA+L +F E+ARRTAAHNEV++LREHEMAWA  TASEMSLRSEMCALKD+ + VSG+ + L++RCDVL++ENAEL ERFA +AEEKRQ+ESKARRLLRSDRYRGY
Sbjct:   65 VATTSTGADGELKYSREA--------LTNKSEIMGASYGR-DGTTPENGADFRRNASLGTGKTAC-PTPSTKSVPAPATASRAAGAATSDDDLTDTDEGVMARLAEFIEMARRTAAHNEVVKLREHEMAWAESTASEMSLRSEMCALKDEYAGVSGDASALRKRCDVLERENAELVERFATMAEEKRQMESKARRLLRSDRYRGY 259
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs944.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVI0_ECTSI1.660e-5657.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..225
NoneNo IPR availableGENE3D6.10.250.2470coord: 164..239
e-value: 4.1E-5
score: 25.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs944contigH-canaliculatus_M_contigs944:2622..5997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs944.1.1mRNA_H-canaliculatus_M_contigs944.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs944 2622..5997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs944.1.1 ID=prot_H-canaliculatus_M_contigs944.1.1|Name=mRNA_H-canaliculatus_M_contigs944.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=246bp
SSSVTGTGTVGSSTGAGTNMFSCSESVSSQPTSAVAAEVATAAVAATATG
YNSRTFFSAEEASPRGGERATSMPAVKSASYDRSDDSSGDRGLSCRSSKL
GATGIPACSPDTPDSSVLASTRAEGAGGSDDDVTDTDEGVMAKLKDFTEI
ARRTAAHNEVMRLREHEMAWAARTASEMSLRSEMCALKDDLSRVSGNNAV
LQRRCDVLQQENAELGERFAAIAEEKRQVESKARRLLRSDRYRGY*
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