prot_H-canaliculatus_M_contigs76122.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs76122.1.1
Unique Nameprot_H-canaliculatus_M_contigs76122.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length120
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: A0A3D2FDN0_9RHOB (LysR family transcriptional regulator n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A3D2FDN0_9RHOB)

HSP 1 Score: 176 bits (447), Expect = 7.990e-53
Identity = 77/117 (65.81%), Postives = 94/117 (80.34%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQ 117
            +L +P  D + IL HPLLHL+TR +GWARW   HG+ + +P GM+FDQFSTMAQAA+HG+G+ALLPTFVAEPYLN+ QL RA+ HT+DSIGTYYLVWP DR   APL AF++WL  Q
Sbjct:  176 LLEQPVADPRAILKHPLLHLETRQKGWARWLSAHGIDEIIPSGMMFDQFSTMAQAALHGMGIALLPTFVAEPYLNSGQLCRASTHTSDSIGTYYLVWPSDRANIAPLNAFKTWLKLQ 292          
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: A0A2T6CG06_9RHOB (DNA-binding transcriptional LysR family regulator n=8 Tax=Sulfitobacter mediterraneus TaxID=83219 RepID=A0A2T6CG06_9RHOB)

HSP 1 Score: 169 bits (429), Expect = 4.720e-50
Identity = 79/117 (67.52%), Postives = 88/117 (75.21%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQ 117
            +L  P  D +DILDHPLLHL+TRPRGWARW     V  D P GM+FDQFSTMAQAA+HGLGVALLPTF AEPYL + QL  A+R T  SIG+YYLVWP DR EGA L +FR WL  Q
Sbjct:  176 LLEAPLTDPQDILDHPLLHLETRPRGWARWLAALNVETDPPAGMMFDQFSTMAQAAIHGLGVALLPTFFAEPYLRDGQLQLASRETTQSIGSYYLVWPHDRPEGAALSSFRDWLSEQ 292          
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: A0A0F9SIQ9_9ZZZZ (HTH lysR-type domain-containing protein n=4 Tax=root TaxID=1 RepID=A0A0F9SIQ9_9ZZZZ)

HSP 1 Score: 167 bits (424), Expect = 2.540e-49
Identity = 77/118 (65.25%), Postives = 89/118 (75.42%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQT 118
            +L  P ++A +IL HPLLHLDTRPRGW+RW    GVTQD P GM+FDQFSTMAQAA+HGLGVALLPTF A PYL + QL  A+  T  SIG YYLVWP+D  E A LK+F+ WL  QT
Sbjct:  176 LLDAPLENAAEILAHPLLHLDTRPRGWSRWLSALGVTQDPPAGMVFDQFSTMAQAAVHGLGVALLPTFSAAPYLRDGQLVLASTQTTHSIGNYYLVWPEDHVETAALKSFKGWLAAQT 293          
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: A0A7Y9Z2P1_9RHOB (DNA-binding transcriptional LysR family regulator n=3 Tax=Sulfitobacter geojensis TaxID=1342299 RepID=A0A7Y9Z2P1_9RHOB)

HSP 1 Score: 167 bits (424), Expect = 2.890e-49
Identity = 77/117 (65.81%), Postives = 90/117 (76.92%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQ 117
            +L  P  +A+D+L+HPLLHL+TRPRGWARW    GVT D P GM+FDQFSTMAQAA+HGLGVALLPTF AEPYL + QL  A+  T  SIG YYLVWP+ R EGA L +FR+WL  Q
Sbjct:  176 LLSAPVIEARDMLEHPLLHLETRPRGWARWLAALGVTADPPAGMVFDQFSTMAQAAIHGLGVALLPTFFAEPYLRDGQLMLASAQTTQSIGNYYLVWPETRDEGAALTSFRNWLAGQ 292          
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: Q161D2_ROSDO (Transcriptional regulator, LysR family, putative n=4 Tax=Roseobacter TaxID=2433 RepID=Q161D2_ROSDO)

HSP 1 Score: 166 bits (419), Expect = 1.360e-48
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQ 117
            ++P P  DA+ IL H L+HL+TRPRGW RW +   +   +PPGM+FDQFSTMAQAA+HGLGVALLPTFVA+P+LN+ QL  A+ H N SIG+YYLVWP+DR E   L +FR+WL  Q
Sbjct:  176 LIPTPLSDARGILSHDLMHLETRPRGWVRWLRSLDIDASLPPGMVFDQFSTMAQAAVHGLGVALLPTFVADPFLNSGQLVLASPHANQSIGSYYLVWPKDREESHSLTSFRTWLRDQ 292          
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: A0A1H2RDK6_9RHOB (Transcriptional regulator, LysR family n=14 Tax=root TaxID=1 RepID=A0A1H2RDK6_9RHOB)

HSP 1 Score: 165 bits (417), Expect = 2.870e-48
Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQTG 119
            +L EP +D   IL + LLHL+TRPRGW+RW    GVTQ+ P GM+FDQFSTMAQAA+HGLGVALLPTF AEPYL + QL  A+  T  SIG YYLVWP+DR E A L++F++WL  QTG
Sbjct:  176 LLTEPLEDPSQILRYALLHLETRPRGWSRWLSALGVTQEPPAGMMFDQFSTMAQAAVHGLGVALLPTFSAEPYLRDGQLVLASTQTTQSIGNYYLVWPEDRAETAALQSFKTWLDGQTG 294          
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: B7RN59_ROSS0 (Transcriptional regulator, LysR family n=1 Tax=Roseobacter sp. (strain GAI101) TaxID=391589 RepID=B7RN59_ROSS0)

HSP 1 Score: 164 bits (416), Expect = 4.060e-48
Identity = 75/117 (64.10%), Postives = 91/117 (77.78%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQ 117
            +L  P +DA+ IL +PLLHLDTRPRGWARW    GVT++ P GM+FDQFSTMAQAA+HGLGVALLPTF A+PYL + QL  A+  T  SIG YYLVWP++R E A L++F+SWL  Q
Sbjct:  176 LLDAPLEDARAILSYPLLHLDTRPRGWARWLAALGVTEEPPSGMMFDQFSTMAQAAVHGLGVALLPTFSADPYLRDGQLVLASTQTTQSIGNYYLVWPEERAETAALRSFKSWLAGQ 292          
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: A0A7Y2CX59_9RHOB (LysR family transcriptional regulator n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A7Y2CX59_9RHOB)

HSP 1 Score: 164 bits (415), Expect = 5.740e-48
Identity = 75/117 (64.10%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQ 117
            +L  P ++A+DIL++PLLHL+TRPRGWARW    GV  D P GM+FDQFSTMAQAA+HGLGVALLPTF A+PYL + QLA A++ T  SIG+YYLVWP +R E A L +FR+WL  Q
Sbjct:  176 LLEAPLEEARDILNYPLLHLETRPRGWARWLSALGVEADPPGGMVFDQFSTMAQAAIHGLGVALLPTFFADPYLRDGQLALASQQTTQSIGSYYLVWPGERAESAALLSFRNWLEMQ 292          
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: A0A5S3PLT1_9RHOB (LysR family transcriptional regulator n=1 Tax=Sulfitobacter sabulilitoris TaxID=2562655 RepID=A0A5S3PLT1_9RHOB)

HSP 1 Score: 164 bits (414), Expect = 8.780e-48
Identity = 72/117 (61.54%), Postives = 91/117 (77.78%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQ 117
            ++  P  D  D+L   LLHL+TRPRGWARW    GVT D+PPGM+FDQFSTMAQAA+HGLGVALLPTF A+PYL++ QL  A+   ++SIG+YYLVWP+DR + APL++FR W+  Q
Sbjct:  176 LIASPLTDPSDMLGFDLLHLETRPRGWARWLSALGVTDDLPPGMMFDQFSTMAQAAIHGLGVALLPTFFADPYLSDGQLVLASERASESIGSYYLVWPEDRPDTAPLQSFRGWVADQ 292          
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Match: A0A1G7MGQ5_9RHOB (DNA-binding transcriptional regulator, LysR family n=10 Tax=Sulfitobacter TaxID=60136 RepID=A0A1G7MGQ5_9RHOB)

HSP 1 Score: 162 bits (410), Expect = 3.160e-47
Identity = 76/117 (64.96%), Postives = 88/117 (75.21%), Query Frame = 0
Query:    1 MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFSTMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQDRTEGAPLKAFRSWLGTQ 117
            +L EP +DA++I   PLLHL+TRPRGWARW    G T+D P GM+FDQFSTMAQAA+HGLGVALLPTF A PYLN+ QL  AA  T  SIG YYLVWP+DR E   L +FR+WL  Q
Sbjct:  176 LLSEPLEDAREIRRLPLLHLETRPRGWARWLGTLGETEDPPVGMMFDQFSTMAQAAIHGLGVALLPTFFARPYLNDGQLVLAAAQTTQSIGNYYLVWPEDRDETGALVSFRNWLAQQ 292          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76122.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D2FDN0_9RHOB7.990e-5365.81LysR family transcriptional regulator n=1 Tax=Sulf... [more]
A0A2T6CG06_9RHOB4.720e-5067.52DNA-binding transcriptional LysR family regulator ... [more]
A0A0F9SIQ9_9ZZZZ2.540e-4965.25HTH lysR-type domain-containing protein n=4 Tax=ro... [more]
A0A7Y9Z2P1_9RHOB2.890e-4965.81DNA-binding transcriptional LysR family regulator ... [more]
Q161D2_ROSDO1.360e-4861.54Transcriptional regulator, LysR family, putative n... [more]
A0A1H2RDK6_9RHOB2.870e-4863.87Transcriptional regulator, LysR family n=14 Tax=ro... [more]
B7RN59_ROSS04.060e-4864.10Transcriptional regulator, LysR family n=1 Tax=Ros... [more]
A0A7Y2CX59_9RHOB5.740e-4864.10LysR family transcriptional regulator n=1 Tax=Sulf... [more]
A0A5S3PLT1_9RHOB8.780e-4861.54LysR family transcriptional regulator n=1 Tax=Sulf... [more]
A0A1G7MGQ5_9RHOB3.160e-4764.96DNA-binding transcriptional regulator, LysR family... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005119LysR, substrate-bindingPFAMPF03466LysR_substratecoord: 7..117
e-value: 1.3E-18
score: 67.2
NoneNo IPR availableGENE3D3.40.190.10coord: 2..86
e-value: 3.2E-22
score: 80.0
NoneNo IPR availablePANTHERPTHR30537:SF26GLYCINE CLEAVAGE SYSTEM TRANSCRIPTIONAL ACTIVATORcoord: 4..117
NoneNo IPR availablePANTHERPTHR30537HTH-TYPE TRANSCRIPTIONAL REGULATORcoord: 4..117
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 6..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76122contigH-canaliculatus_M_contigs76122:36..395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76122.1.1mRNA_H-canaliculatus_M_contigs76122.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs76122 6..395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs76122.1.1 ID=prot_H-canaliculatus_M_contigs76122.1.1|Name=mRNA_H-canaliculatus_M_contigs76122.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=120bp
MLPEPAQDAKDILDHPLLHLDTRPRGWARWFKDHGVTQDVPPGMIFDQFS
TMAQAAMHGLGVALLPTFVAEPYLNNRQLARAARHTNDSIGTYYLVWPQD
RTEGAPLKAFRSWLGTQTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005119LysR_subst-bd