prot_H-canaliculatus_M_contigs75506.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs75506.1.1
Unique Nameprot_H-canaliculatus_M_contigs75506.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length59
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs75506.1.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.230e-6
Identity = 25/42 (59.52%), Postives = 35/42 (83.33%), Query Frame = 0 
Query:   18 VNLAIIIDGSSSVNSTNFALSKEFAKDAVDAFADENLFVNGG 59
            VN+A+IID S SV++ ++ LSKEFAK+ V +FA++NLF NGG
Sbjct:   91 VNVAVIIDASGSVSTADWELSKEFAKNTVASFAEQNLFTNGG 132
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BLAST of mRNA_H-canaliculatus_M_contigs75506.1.1 vs. uniprot
Match: D7FY49_ECTSI (Similar to collagen, partial n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY49_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.650e-6
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:   18 VNLAIIIDGSSSVNSTNFALSKEFAKDAVDAFADENLFVNGG 59
            VN+A+IID S SV + ++ LSKEFAK+ V +FA++NLF NGG
Sbjct:   74 VNVAVIIDASGSVGTADWELSKEFAKNTVASFAEQNLFTNGG 115
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75506.1.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 5.960e-6
Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 0 
Query:   18 VNLAIIIDGSSSVNSTNFALSKEFAKDAVDAFADENLFVNGG 59
            VN+A+IID S SV + ++ LSKEFAK+ V +FA +NLF NGG
Sbjct:   81 VNVAVIIDASVSVGTADWELSKEFAKNTVASFAQQNLFTNGG 122
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75506.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRK3_9PHAE1.230e-659.52VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FY49_ECTSI1.650e-659.52Similar to collagen, partial n=2 Tax=Ectocarpus si... [more]
D7FHN6_ECTSI5.960e-659.52Glycin-rich protein n=1 Tax=Ectocarpus siliculosus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 2..57
e-value: 1.1E-7
score: 33.6
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 12..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75506contigH-canaliculatus_M_contigs75506:14..190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75506.1.1mRNA_H-canaliculatus_M_contigs75506.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs75506 14..190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs75506.1.1 ID=prot_H-canaliculatus_M_contigs75506.1.1|Name=mRNA_H-canaliculatus_M_contigs75506.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=59bp
TYTNAFQQTSEHQSKPQVNLAIIIDGSSSVNSTNFALSKEFAKDAVDAFA
DENLFVNGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf