prot_H-canaliculatus_M_contigs7538.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7538.1.1
Unique Nameprot_H-canaliculatus_M_contigs7538.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length173
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs7538.1.1 vs. uniprot
Match: D7FJJ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJJ8_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 1.050e-87
Identity = 139/172 (80.81%), Postives = 152/172 (88.37%), Query Frame = 0 
Query:    1 MDLPGPIRIMDEDVSHVAKQRELAADIVKSVYYITPKYAIKDVERYSDGLHSSGCQGQSLASQLSAGMKRYLPPELTDRPAIGANAAAGKLPGLKPLPAFDAKSLTALEDRERKSAETAGAEKXXXXXXXDTGVLSDIEAEVXXXXXXDDYAVDHYESGDESAGDDEPAAVF 172
            MDLPGPIRI+++DVSHVAKQRELAAD+ KS+YYITPKYA+KDVERYSDG+HS G +GQSLASQLSAGMKR+LPPELTDRPAIG  AA GKLPGLKPLPAFD KSLTALED+ERKSAET GAEK       D G+LSD+EAEV  XXXX DYAVDHYESG+ES GDDEPAAVF
Sbjct:   15 MDLPGPIRILEDDVSHVAKQRELAADMSKSIYYITPKYAVKDVERYSDGVHSGGYRGQSLASQLSAGMKRHLPPELTDRPAIGTTAAGGKLPGLKPLPAFDGKSLTALEDKERKSAETGGAEKEKDKE--DAGMLSDVEAEVEEXXXXXDYAVDHYESGNESGGDDEPAAVF 184
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7538.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJJ8_ECTSI1.050e-8780.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024661DNA-directed RNA polymerase III, subunit Rpc31PFAMPF11705RNA_pol_3_Rpc31coord: 4..160
e-value: 5.7E-8
score: 33.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7538contigH-canaliculatus_M_contigs7538:1024..1542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7538.1.1mRNA_H-canaliculatus_M_contigs7538.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7538 605..1572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7538.1.1 ID=prot_H-canaliculatus_M_contigs7538.1.1|Name=mRNA_H-canaliculatus_M_contigs7538.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=173bp
MDLPGPIRIMDEDVSHVAKQRELAADIVKSVYYITPKYAIKDVERYSDGL
HSSGCQGQSLASQLSAGMKRYLPPELTDRPAIGANAAAGKLPGLKPLPAF
DAKSLTALEDRERKSAETAGAEKEKEKDKDDTGVLSDIEAEVEEEEQDDD
YAVDHYESGDESAGDDEPAAVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024661RNA_pol_III_Rpc31