prot_H-canaliculatus_M_contigs75231.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs75231.1.1
Unique Nameprot_H-canaliculatus_M_contigs75231.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length54
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75231.1.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 7.380e-23
Identity = 45/52 (86.54%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:    4 VGHGVRKPDFEAADKSQRLL-GVPAPALRHSFAQHLIRGERVMDPDAGVRGR 54
            VGHGVRKPD++AADKSQRLL GVPAPAL+HSFAQHL+RGE+VMDPDAGVR R
Sbjct:  955 VGHGVRKPDYDAADKSQRLLLGVPAPALKHSFAQHLVRGEKVMDPDAGVRSR 1006
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75231.1.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 7.390e-23
Identity = 45/52 (86.54%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:    4 VGHGVRKPDFEAADKSQRLL-GVPAPALRHSFAQHLIRGERVMDPDAGVRGR 54
            VGHGVRKPD++AADKSQRLL GVPAPAL+HSFAQHL+RGE+VMDPDAGVR R
Sbjct: 1374 VGHGVRKPDYDAADKSQRLLLGVPAPALKHSFAQHLVRGEKVMDPDAGVRSR 1425
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75231.1.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE)

HSP 1 Score: 79.0 bits (193), Expect = 8.050e-16
Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 0 
Query:    4 VGHGVRKPDFEAADKSQRLL-GVPAPALRHSFAQHLIRGERVMDPDAGVRGR 54
            V  G+ + D++AA KSQRLL GVP PALRHSF QHL+RGERVMDPDAGVR R
Sbjct:  661 VVRGIHEHDYKAACKSQRLLLGVPVPALRHSFVQHLMRGERVMDPDAGVRRR 712
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75231.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZW2_ECTSI7.380e-2386.54Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5KQM7_9PHAE7.390e-2386.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2S1PRV6_FUCSE8.050e-1673.08Putative dicer (Fragment) n=1 Tax=Fucus serratus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75231contigH-canaliculatus_M_contigs75231:286..447 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75231.1.1mRNA_H-canaliculatus_M_contigs75231.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs75231 286..447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs75231.1.1 ID=prot_H-canaliculatus_M_contigs75231.1.1|Name=mRNA_H-canaliculatus_M_contigs75231.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=54bp
SRKVGHGVRKPDFEAADKSQRLLGVPAPALRHSFAQHLIRGERVMDPDAG
VRGR
back to top