prot_H-canaliculatus_M_contigs75119.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs75119.1.1
Unique Nameprot_H-canaliculatus_M_contigs75119.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length69
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: D8LGH0_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGH0_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.590e-23
Identity = 51/59 (86.44%), Postives = 57/59 (96.61%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLGE 59
            MSI+LRQLIR+VR+CKTAAEERAVIATEGALIRTAFK+GN+P RARNVA+LLYMHM GE
Sbjct:    1 MSIRLRQLIRKVRSCKTAAEERAVIATEGALIRTAFKEGNDPTRARNVARLLYMHMFGE 59
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: A0A662XRJ5_9STRA (Adaptin_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRJ5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 8.690e-19
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLGEAS 61
            MS KLR LIR VRACKTAAEERAVIA E ALIRTAFKD ++  R RNVAKLL++HMLG  S
Sbjct:    1 MSQKLRDLIRSVRACKTAAEERAVIAKESALIRTAFKDQDKQYRHRNVAKLLFIHMLGYPS 61
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: K0T3C6_THAOC (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T3C6_THAOC)

HSP 1 Score: 82.4 bits (202), Expect = 1.610e-18
Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLG 58
            MS+KLR LIRQVRACKTAAEERAVIA E A+IRTA ++  E  R RNVAKLL+MHMLG
Sbjct:    1 MSLKLRDLIRQVRACKTAAEERAVIAKESAMIRTAIREEQEHYRHRNVAKLLFMHMLG 58
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: A0A425C4M0_9STRA (Adaptin_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425C4M0_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.990e-18
Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLGEAS 61
            MSIKLR LIR VRACKTAAEERAVIA E ALIRTAFKD ++  R RNVAKLL++HMLG  S
Sbjct:    1 MSIKLRDLIRNVRACKTAAEERAVIAKESALIRTAFKDNDKQYRHRNVAKLLFIHMLGYPS 61
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: A0A397DE85_9STRA (Adaptin_N domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE85_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.490e-18
Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLGEAS 61
            MSIKLR LIR VRACKTAAEERAVIA E ALIRTAFKD ++  R RNVAKLL++HMLG  S
Sbjct:    1 MSIKLRDLIRNVRACKTAAEERAVIAKESALIRTAFKDNDKQYRHRNVAKLLFIHMLGYPS 61
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: A0A397F0B5_9STRA (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F0B5_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 5.320e-18
Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLGEAS 61
            MSIKLR LIR VRACKTAAEERAVIA E ALIRTAFKD ++  R RNVAKLL++HMLG  S
Sbjct:    1 MSIKLRDLIRNVRACKTAAEERAVIAKESALIRTAFKDNDKQYRHRNVAKLLFIHMLGYPS 61
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: A0A7S1U5B6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5B6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 5.560e-18
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLGEAS 61
            MS++LR+LIR VRACKTAAEERAVIA E ALIRTAFKD NE  R RNVAKLL++HMLG  S
Sbjct:    1 MSMRLRELIRAVRACKTAAEERAVIAKECALIRTAFKDNNETFRHRNVAKLLFIHMLGYPS 61
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: A0A3R6WVD6_9STRA (AP-1 complex subunit gamma n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6WVD6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 5.580e-18
Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLGEAS 61
            MSIKLR LIR VRACKTAAEERAVIA E ALIRTAFKD ++  R RNVAKLL++HMLG  S
Sbjct:    1 MSIKLRDLIRNVRACKTAAEERAVIAKESALIRTAFKDNDKQYRHRNVAKLLFIHMLGYPS 61
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: A0A485KG16_9STRA (AP-1 complex subunit gamma n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG16_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 5.590e-18
Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLGEAS 61
            MSIKLR LIR VRACKTAAEERAVIA E ALIRTAFKD ++  R RNVAKLL++HMLG  S
Sbjct:    1 MSIKLRDLIRNVRACKTAAEERAVIAKESALIRTAFKDNDKQYRHRNVAKLLFIHMLGYPS 61
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Match: A0A024TMH5_9STRA (AP-1 complex subunit gamma n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TMH5_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 5.590e-18
Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0 
Query:    1 MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAKLLYMHMLGEAS 61
            MSIKLR LIR VRACKTAAEERAVIA E ALIRTAFKD ++  R RNVAKLL++HMLG  S
Sbjct:    1 MSIKLRDLIRNVRACKTAAEERAVIAKESALIRTAFKDNDKQYRHRNVAKLLFIHMLGYPS 61
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75119.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGH0_ECTSI1.590e-2386.44AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A662XRJ5_9STRA8.690e-1975.41Adaptin_N domain-containing protein n=1 Tax=Nothop... [more]
K0T3C6_THAOC1.610e-1875.86Adaptin_N domain-containing protein (Fragment) n=1... [more]
A0A425C4M0_9STRA1.990e-1877.05Adaptin_N domain-containing protein n=1 Tax=Aphano... [more]
A0A397DE85_9STRA2.490e-1877.05Adaptin_N domain-containing protein n=2 Tax=Aphano... [more]
A0A397F0B5_9STRA5.320e-1877.05Adaptin_N domain-containing protein (Fragment) n=1... [more]
A0A7S1U5B6_9STRA5.560e-1877.05Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A3R6WVD6_9STRA5.580e-1877.05AP-1 complex subunit gamma n=2 Tax=Aphanomyces ast... [more]
A0A485KG16_9STRA5.590e-1877.05AP-1 complex subunit gamma n=1 Tax=Aphanomyces ste... [more]
A0A024TMH5_9STRA5.590e-1877.05AP-1 complex subunit gamma n=5 Tax=Aphanomyces Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..68
e-value: 1.7E-16
score: 61.8
NoneNo IPR availablePANTHERPTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONcoord: 1..60
NoneNo IPR availablePANTHERPTHR22780:SF5AP-1 COMPLEX SUBUNIT GAMMAcoord: 1..60
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75119contigH-canaliculatus_M_contigs75119:80..286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75119.1.1mRNA_H-canaliculatus_M_contigs75119.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs75119 80..286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs75119.1.1 ID=prot_H-canaliculatus_M_contigs75119.1.1|Name=mRNA_H-canaliculatus_M_contigs75119.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=69bp
MSIKLRQLIRQVRACKTAAEERAVIATEGALIRTAFKDGNEPNRARNVAK
LLYMHMLGEASRCCAWFCV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like