mRNA_H-canaliculatus_M_contigs80.5.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs80.5.1
Unique NamemRNA_H-canaliculatus_M_contigs80.5.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY0_ECTSI)

HSP 1 Score: 523 bits (1347), Expect = 8.420e-186
Identity = 253/274 (92.34%), Postives = 260/274 (94.89%), Query Frame = 1
Query:    1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWN-NGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKDKK 819
            VNMWSLGQPGTTGQQIGVHDAAVK+VRFIPEMNLVASASWDRTVKFWDTRTS PAAVV LCERAYSMDT+GAMMVVATA+RKICVYNLGSW  NGP PQTMTDSPLRYQTRCVSIFPD QGFAVGSIEGRVGIEYFSEQAAK QAASGYKP TTYG TKLSFAFKCHRV G Q+SVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKA+DLKQGNTISVCKFSPDGGLFGYA+SYDWSQGVEHANPQ TNNI VH VAD+EIKPRPKDKK
Sbjct:   93 VNMWSLGQPGTTGQQIGVHDAAVKTVRFIPEMNLVASASWDRTVKFWDTRTSTPAAVVTLCERAYSMDTKGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPATTYGNTKLSFAFKCHRVAGAQSSVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 366          
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: WD40-repeat-containing (domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU3_9STRA)

HSP 1 Score: 278 bits (710), Expect = 4.730e-89
Identity = 145/277 (52.35%), Postives = 180/277 (64.98%), Query Frame = 1
Query:    1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVT----GTQASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKDKK 819
            V  W L   G     IG HDA V+ + +IP M+L+A+ SWD+T++FWD +  NP   + L ER Y ++ R   +VV TA+RK  VYNLG+       +++ +S L+YQTRC +IFPD  G+AVGSIEGRV IEYFSE   +    +G         TK  FAFKCHR T     +Q  V+S+NSIAFH YGTFATAGSDG F+FWDKDSRQRLK F  KQ  TIS   FSPDG L+ YA+SYDWSQGV  A P   + I +H V D+EIKPR K +K
Sbjct:   99 VKAWDLQGAGHPSMDIGKHDAPVRKMAWIPSMSLLATGSWDKTIRFWDMKQPNPVHTMTLSERVYDLEVRDNWLVVCTADRKNSVYNLGA---NCKLESVAESTLKYQTRCAAIFPDQTGYAVGSIEGRVAIEYFSELPNE----TGVPRALPASQTKRGFAFKCHRETLPQNKSQTGVFSINSIAFHPYGTFATAGSDGTFNFWDKDSRQRLKQFP-KQATTISTAAFSPDGSLYAYAVSYDWSQGVGGAQPGLPHEIKLHVVTDDEIKPRDKPRK 367          
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTP8_9STRA)

HSP 1 Score: 259 bits (662), Expect = 6.930e-82
Identity = 137/277 (49.46%), Postives = 172/277 (62.09%), Query Frame = 1
Query:    1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQ-------ASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPK 810
            + MW LGQP    QQ+G HDA +K    + E N+V +  WD++V+ WD RT NP A + L ER Y+MD R  ++VV TA RK+C+Y+L S  N   P  + DSPLR+QTRCV+ FPD +GFA+GSIEGRVGI +   + A                    FAFKCHR T           ++Y+VNSIAFH  GTFATAGSDG +++WDKDS+QRL  F  K   TIS   FSP GGL+ YALSYDWS+G E  +PQ  N IM+H V  +EI  R K
Sbjct:  101 LQMWRLGQP--QAQQVGKHDAPIKHCFHVAETNVVLTGGWDKSVRAWDCRTPNPVATIPLPERCYAMDVRHPLLVVGTAERKVCIYDLSS-ANWQQPYRVEDSPLRHQTRCVAAFPDREGFAIGSIEGRVGIHHVDPKNAHRN-----------------FAFKCHRETQDARAGQTGLCNIYAVNSIAFHHLGTFATAGSDGVYNYWDKDSKQRLMQFK-KAAQTISTACFSPSGGLYAYALSYDWSRGSESHSPQIPNQIMIHRVQKDEITQRNK 356          
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Hypothetical (protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WN19_9STRA)

HSP 1 Score: 255 bits (651), Expect = 9.910e-82
Identity = 134/271 (49.45%), Postives = 170/271 (62.73%), Query Frame = 1
Query:    7 MWSLGQ--PGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFH-KYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPK 810
            MW LGQ  P    QQIG HDA +K VR++P  NLV S  WDR +KFWDTR+ NPA V+++ ER Y+MD R  ++VVATA R + +Y++      P      +SPL+YQ+RCV+ FPD  G+AVGSIEGRVGI+Y  +                    + SFAFKCHR     + VYSVN+IAF  ++GTFAT G+DG  +FWDK++RQRLKAF      TIS  +F+  G LF YA SYDWS+G     P   N I +H   DEEIKP+PK
Sbjct:    2 MWQLGQSPPNGVAQQIGAHDAPIKGVRYLPNSNLVVSGGWDRKLKFWDTRSPNPAGVLDMPERIYAMDVRNTLLVVATAGRHLIMYDVSGAQ--PREHQRKESPLKYQSRCVTCFPDASGYAVGSIEGRVGIQYIQKTP-----------------NRDSFAFKCHRQ---DSGVYSVNAIAFQQRFGTFATVGADGVVNFWDKENRQRLKAF-AAINRTISCAEFNSPGNLFAYASSYDWSKGSSVYAPGTANEIYIHYTPDEEIKPKPK 249          
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1R3_AURAN)

HSP 1 Score: 252 bits (643), Expect = 4.640e-79
Identity = 135/275 (49.09%), Postives = 167/275 (60.73%), Query Frame = 1
Query:    7 MWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVT-------GTQASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPK 810
            MW+LGQP    Q  G HDA ++S+ F+P ++ V + SWD+T+K WD R   P A V L ER YSMD    +MVVATA RK+CVY+L +  N   P  + DSPL++QTRCV  FPD +GFA+GSIEGRV I +   + A                    FAFKCHR T        +  ++Y+VN IAFH  GTFATAGSDG F+FWDKDS+QRL AF  +    IS   FSP G L+ YALSYDWS+G E   P   N IM+H V  +EI  R K
Sbjct:  100 MWTLGQP--QAQTFGKHDAPIRSIHFVPALSCVFTGSWDKTIKCWDVRQPTPTASVQLPERCYSMDVAHPLMVVATAERKLCVYDLSN-ANWQRPYRVEDSPLKHQTRCVRCFPDREGFAIGSIEGRVAIHHVDAKDAHKN-----------------FAFKCHRDTQDGRAGQASTCNIYAVNDIAFHNLGTFATAGSDGVFNFWDKDSKQRLMAFK-RADRPISCAAFSPAGTLYAYALSYDWSRGSESHTPTDPNTIMLHKVQKDEITQRNK 353          
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD06_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.090e-76
Identity = 141/277 (50.90%), Postives = 163/277 (58.84%), Query Frame = 1
Query:    1 VNMWSLGQ--PGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGT-NNIMVHTVADEEIKPRPKDKK 819
            V MW LG+  P    QQIGVHD  VKSV F+   NLV S  WD  +KFWDTR+  PA    L ER Y +D RG +MVV TANRK+ VY++   +  P   +  +SPL+YQTRCV  FPD  GFA GS+EGRVGI Y                  T  A K  FAFKCHR       VYSVN IAF   YGTFAT G+DG   FWDKD++QRLKAF+  Q  TIS   F+  G LF YA SYDWS+G     P  T N I +H   DEEIKP+   KK
Sbjct:  103 VRMWRLGETPPNNVAQQIGVHDKPVKSVGFLSSSNLVVSGGWDNKLKFWDTRSPTPAGEFVLPERIYDLDVRGNLMVVGTANRKLYVYDV---SGQPREHSTMESPLKYQTRCVRCFPDQTGFACGSLEGRVGIRY-----------------VTKVANKDHFAFKCHRQGN---DVYSVNDIAFQNTYGTFATVGADGVVTFWDKDNKQRLKAFNAIQ-QTISCAAFNAQGNLFAYASSYDWSKGSGFYAPGSTPNEIFIHYTPDEEIKPKAAKKK 355          
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3S1_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.500e-76
Identity = 134/273 (49.08%), Postives = 166/273 (60.81%), Query Frame = 1
Query:    1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKDK 816
            + MW LGQ  T  QQIG HDA +K+V F+  MN V +  WDR +KFWD R+ NP  V+++ ER Y+MD R  ++VVATA R I VY+    N  P      +SPL+YQTR ++ F D  GFAVGSIEGRVGI Y  +                    K SFAFKCHR      +VYSVN+IAF+  YGTFAT GSDG  +FWDKD++QRLK F   Q  TI    F+  G LF YA SYDWS+G  H  P   N+I +H V +EEI+P+ K K
Sbjct:  100 LRMWQLGQQVTVPQQIGAHDAPIKTVGFLKSMNTVVTGGWDRKLKFWDCRSPNPVGVLDMPERVYAMDIRDTLLVVATAGRHILVYDC---NQQPREYLRKESPLKYQTRSIACFTDKTGFAVGSIEGRVGIHYVQKVP-----------------NKDSFAFKCHREN---VNVYSVNAIAFNNHYGTFATCGSDGIINFWDKDNKQRLKGFPAIQ-RTILAAAFNTQGNLFAYASSYDWSKGSMHMQPG--NDIFIHPVVEEEIRPKGKTK 346          
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J4_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.910e-76
Identity = 133/278 (47.84%), Postives = 171/278 (61.51%), Query Frame = 1
Query:    1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTG-------TQASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKD 813
            ++MW+L    T+   IG H+A +KSV  + E NL  +  WD  ++ WD RT  PAA + L ER Y+M     +MVV TA RKI +Y+L S +N   P    +SPLR+QTRC++ FPD  GFA+GSIEGRV I + + + A                    FAFKCHR T        T  ++Y+VNSI FHK+GTFATAGSDG ++FWDKDS+QRL AF     NTI    FSP G L+ YALSYDWS+G E+ NPQ  N IM+H V +EEI+ R K+
Sbjct:  111 LHMWNLQTQQTS--VIGRHEAPIKSVHCVREFNLAVTGGWDNAIRCWDARTPTPAATITLPERCYAMAVNHPLMVVGTAERKILMYDL-SRSNWQQPMRFEESPLRHQTRCIATFPDRDGFAIGSIEGRVAIHHVNIKEAGRN-----------------FAFKCHRDTQENRVGQPTVCNIYAVNSIVFHKFGTFATAGSDGVYNFWDKDSKQRLMAFKAAP-NTIPCASFSPIGNLYAYALSYDWSRGSENYNPQTPNYIMLHHVKEEEIRQRKKN 367          
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: WD40 (repeat-like protein n=1 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S8VY86_AURPU)

HSP 1 Score: 243 bits (620), Expect = 1.760e-75
Identity = 131/280 (46.79%), Postives = 170/280 (60.71%), Query Frame = 1
Query:    1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMN--LVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRV----TGTQASVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKDKK 819
            V+M  LG   TT Q +  HDA +K V  I   N  ++ + SWD+T+K+WD R   PAA V   ER Y+MDTR  ++VVATA+R + ++NL   N    P     SPL++QTR +S F D  GFA+GSIEGR  I+Y  E+ A +                  F+FKCHR     T  Q++VYSVNSI+FH  +GTF+TAGSDG FHFWDKD++ RLK +  + G +IS   FS DG +F YA+SYDW QG    NPQ  N +M+H V  +E KPRP  KK
Sbjct:  108 VSMLDLGSGSTTPQVVAAHDAPIKCVESITVNNSPMIVTGSWDKTIKYWDLRQQTPAASVQCKERVYAMDTRDQLLVVATADRWVEIFNL---NQPSQPYKQIQSPLKWQTRTISCFADATGFAIGSIEGRCAIQYVEEKDASSN-----------------FSFKCHRQNAPNTRDQSNVYSVNSISFHPVHGTFSTAGSDGTFHFWDKDAKHRLKGYP-EVGGSISCTDFSHDGNIFAYAVSYDWHQGYSGNNPQYPNKVMLHPVIGDECKPRPNSKK 366          
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNW4_PHATC)

HSP 1 Score: 242 bits (617), Expect = 3.720e-75
Identity = 133/273 (48.72%), Postives = 165/273 (60.44%), Query Frame = 1
Query:    1 VNMWSLGQ--PGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPK 810
            V MW LG   P    QQIG HDA V+ V F+   N+V S  WDR +KFWD R   P A +++ ER Y+MD R  ++VVATA R I  Y++   +  P      +SPL+YQTRC++ FPD  GFAVGSIEGRVGI Y  + A +                  SFAFKCHR     ++ YSVN IAF K +GTFAT GSDG  +FWDKD++QRLK F+  Q  TIS   F+  G LF YA SYDWSQG  H  P   N I +H VA++EI+P+ K
Sbjct:  105 VRMWQLGSAPPNNIPQQIGAHDAPVQGVGFLRATNIVVSGGWDRKLKFWDCRQPTPVATLDMPERVYAMDVRDNLLVVATAGRHIICYDV---SGQPREYLRKESPLKYQTRCIACFPDQMGFAVGSIEGRVGIHYVQKVAGRD-----------------SFAFKCHRQ---DSNAYSVNCIAFQKQFGTFATVGSDGIVNFWDKDNKQRLKGFNAIQ-RTISCAAFNEQGNLFAYASSYDWSQGSMHLQPG--NEIFIHNVAEDEIRPKGK 351          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized8.420e-18692.34protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
WD40-repeat-containing4.730e-8952.35domain protein n=1 Tax=Tribonema minus TaxID=30337... [more]
Hypothetical6.930e-8249.46protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical9.910e-8249.45protein n=1 Tax=Craspedostauros australis TaxID=14... [more]
Uncharacterized4.640e-7949.09protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Uncharacterized1.090e-7650.90protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]
Hypothetical1.500e-7649.08protein n=1 Tax=Amphora coffeiformis TaxID=265554 ... [more]
Hypothetical1.910e-7647.84protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
WD401.760e-7546.79repeat-like protein n=1 Tax=Aureobasidium pullulan... [more]
Predicted3.720e-7548.72protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs80contigH-canaliculatus_M_contigs80:5337..11733 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSY0
Preferred nameRAE1
PFAMsWD40
Model size822
Max annot lvl2759|Eukaryota
KEGG koko:K14298
KEGG TC1.I.1
KEGG Pathwayko03013,ko05164,map03013,map05164
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000054,GO:0000151,GO:0000278,GO:0000280,GO:0000922,GO:0000972,GO:0000973,GO:0001650,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005730,GO:0005737,GO:0005739,GO:0005819,GO:0005829,GO:0005856,GO:0005929,GO:0006403,GO:0006405,GO:0006406,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0007049,GO:0007127,GO:0007140,GO:0007141,GO:0007276,GO:0007283,GO:0007346,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008582,GO:0009893,GO:0009894,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010506,GO:0010564,GO:0010604,GO:0010628,GO:0010793,GO:0012505,GO:0014070,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0016006,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016973,GO:0017038,GO:0019222,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022613,GO:0031081,GO:0031224,GO:0031323,GO:0031329,GO:0031461,GO:0031503,GO:0031514,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032182,GO:0032239,GO:0032386,GO:0032501,GO:0032504,GO:0032879,GO:0032880,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0033750,GO:0034504,GO:0034613,GO:0034629,GO:0036126,GO:0040008,GO:0042221,GO:0042254,GO:0042886,GO:0042995,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0044703,GO:0045184,GO:0045886,GO:0045926,GO:0046822,GO:0046825,GO:0046831,GO:0046907,GO:0048232,GO:0048285,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048609,GO:0048638,GO:0048640,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050896,GO:0051028,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051239,GO:0051241,GO:0051276,GO:0051321,GO:0051493,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051664,GO:0051668,GO:0051704,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0051963,GO:0051964,GO:0060236,GO:0060255,GO:0060341,GO:0061982,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070507,GO:0070727,GO:0070887,GO:0071166,GO:0071310,GO:0071407,GO:0071426,GO:0071427,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072686,GO:0080008,GO:0080134,GO:0080135,GO:0090087,GO:0090224,GO:0097159,GO:0097223,GO:0097431,GO:0097729,GO:0120025,GO:0140013,GO:1900034,GO:1901363,GO:1901987,GO:1901990,GO:1902494,GO:1902806,GO:1903046,GO:1903827,GO:1904396,GO:1904397,GO:1905809,GO:1990234,GO:2000026,GO:2000045,GO:2000197,GO:2000728
Exons6
Evalue4.25e-185
EggNOG OGsKOG0647@1|root,KOG0647@2759|Eukaryota
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-27_006770.1
Descriptiontranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
Cds size816
COG categoryS
BRITEko00000,ko00001,ko00002,ko03019,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs80.5.1prot_H-canaliculatus_M_contigs80.5.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs80 5337..11727 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854129.7784514-CDS-H-canaliculatus_M_contigs80:5336..54601696854129.7784514-CDS-H-canaliculatus_M_contigs80:5336..5460Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 5337..5460 -
1696854129.7912602-CDS-H-canaliculatus_M_contigs80:7477..76681696854129.7912602-CDS-H-canaliculatus_M_contigs80:7477..7668Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 7478..7668 -
1696854129.8018663-CDS-H-canaliculatus_M_contigs80:8849..90271696854129.8018663-CDS-H-canaliculatus_M_contigs80:8849..9027Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 8850..9027 -
1696854129.8145804-CDS-H-canaliculatus_M_contigs80:9867..99501696854129.8145804-CDS-H-canaliculatus_M_contigs80:9867..9950Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 9868..9950 -
1696854129.824726-CDS-H-canaliculatus_M_contigs80:10496..106231696854129.824726-CDS-H-canaliculatus_M_contigs80:10496..10623Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 10497..10623 -
1696854129.839655-CDS-H-canaliculatus_M_contigs80:11614..117271696854129.839655-CDS-H-canaliculatus_M_contigs80:11614..11727Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs80 11615..11727 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854129.85412-UTR-H-canaliculatus_M_contigs80:11727..117331696854129.85412-UTR-H-canaliculatus_M_contigs80:11727..11733Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs80 11728..11733 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs80.5.1

>prot_H-canaliculatus_M_contigs80.5.1 ID=prot_H-canaliculatus_M_contigs80.5.1|Name=mRNA_H-canaliculatus_M_contigs80.5.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=272bp
MWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTS
NPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTD
SPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVT
TYGATKLSFAFKCHRVTGTQASVYSVNSIAFHKYGTFATAGSDGNFHFWD
KDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGT
NNIMVHTVADEEIKPRPKDKK*
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mRNA from alignment at H-canaliculatus_M_contigs80:5337..11733-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs80.5.1 ID=mRNA_H-canaliculatus_M_contigs80.5.1|Name=mRNA_H-canaliculatus_M_contigs80.5.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=6397bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs80:5337..11733- (Hapterophycus canaliculatus Oshoro7m male)
GTGAACATGTGGTCGCTGGGTCAGCCGGGCACTACAGGACAGCAGATCGG CGTGCACGATGCGGCGGTGAAAAGCGTCCGATTTATCCCGGAGATGAACC TCGTCGCTAGCGCCTCGTGGTGAGAGCCACACACAGACCACACTACACCA CACTATACTAAACCACACCATGCTACACTACACCACACTATACCACACTA GACTAATCCACACCATGCTACACCATACTACACCACACTGCGCTAATCCA TACCACGCTACACCACGCTACACCACACCACACTGCACTAATCCACACCA CGCCACACCATACTACACCATACTACACTACACCACCTCGACAACCTCCT GCCATTGTTGCATCGTTCTGCGTCCATGTTGGAGCCGCCATCGGGGGACG CAACGGTTGTGGGTCGCCTTGCGGCATTGAGGGTGTGCGCGAGTTTGCTC GTGCTGCTTCTGTCTTGTGTGTGCGGAGCAGAAGCAGAAGTAGTACTGTA TAGTACTCGGAGTATATATTTGTGTCCGCTGTGTTTCCGTAACCACTTGT TTCGCTCGTCATATTGTCGCGGCACCCACTCAGCTCATGTCGTTGAATGT TGCCTCCGCGTGTAGTCACCGGAATCGCTTGCGTCTCGCTGGCAGTAGAC GAAAGCAACGAAGGCTCGTGAGGGCACGGGCCGGCATGATGTCATGACGT CGGCGCCAGTCCGTGTTGGAGAGACAACGACGCAGCAGTATTAATAGCAC CAACAACAAGCAAAAAGCACCACTAGTTACGCCAGGAGCAGCAGCGACGT CGACAGCGACAGCAACAGCGACAGCTGATAGCGCTCCCGCCCCCGTCGCG CCCTGCTTCTCTCGATCGTTTTCATAAAACAAGTCAACAACACCGAAGGA ATACCCACCTGAGACACAGTCTATCTCCAGGGGCTTTTGTTAATTCCATT CAGTGAGGGTTCCATTCGGGTGGCAGGATGAAACTATGTAGCAGTAGGCC AGTTGTGGACAAAAACGTAAAAAAAATGTGGACAAAGACGTCAAGAACGT GGGATGGGGGATGTATCGTTTGTCGAATCCAACGGAATCCAACGGAATCA AACGCTGCAGGGATCGCACAGTGAAGTTCTGGGACACTCGAACGTCCAAC CCCGCGGCGGTGGTTAACCTTTGCGAGAGGGCATACTCCATGGACACCCG GGGGGCGATGATGGTGGTCGCCACAGCCAACAGAAAGGTGGGCCCGGCGA TCCCTGGGTCGGTCCGATGTCTCGCTGAGCCTGCTTTCCGCAAGGGAGGT TTGTAAGCGTCGCTGCTGTGTGAGTTTGCCGTTGCTGCATGTCTCCATCG TTGTAGCACCTGCGTCTATCGGTCTTGCTGCTTTTGCCATGATGCGTGCT CTCGCAGTTTGCAAACTTGCTGAGCTGGCCGGCAGGCACATGGAAAGCCT CCGTTTCCGGGTAGCACCAGGGCGAGGAAAGGCCCTGGGTGTTCGCGCGA GGAGGCATGTGTCGCATGGGGAATGTGGGGGGCGTGTAGGTGTGGAACCG ATCACCGCGTAGATTCCACGGGACCGTGCTGTCTGCCTGACACTGTGATG GGAGAAATGACGAGATAATGCCACCGCCTAGCAGGTTTCCGTCAGTCTGT TCAGCAGCTCCAGTGCTACATCAGCGACGTCTGATATCTGGCCAGCCCCA CCCTAACCCTAACCGCACGAAGCTCTACCTGCCTCACCCCCCCCCCGCCG TTTGTGCCACTCCGTGTGGCCTCGGTGCGGTAGATCTGCGTATACAACCT GGGCAGCTGGAATAACGGCCCTACGCCCCAAACGATGACCGACTCGCCTT TGAGATATCAAACCAGGTGAAAGGATGCCCGCATCATTACAAATTGATCC AGGATGCACTTTTGTTCGTCGGAACCTGTGGTGAAGTGATTGGTGGTGGG GCATGGTGTGTGACGATAGCGTGATATGATTGGATGATTGGTGTGTTCGC GTGAGCAATTATTACTCTGACTAAGGTGTTCGGCGGCACCGTCCGCGGTC GCTCGGCAAGTCGCAGGATCGCGATGGCGATGTCTCTCTTTCATCGGCGG TGGTGCGATGTCGACGACCTCTAGCCTATCCTTGACGATGGGTGTCTTTG GCGAGCCCTGGCACACTCAAGCGGACGTACCGTTTCAGGGATTTTGGTTC ACCCCAAACGAATTGTAACCGAAAATCCTACGGGCAAAACGTGAAGTTTC GCAATCGAAAAGTAAGGTATCAGGCACACAACAAGTGGCAGTCGCATAAA GTGCGACCGGGAATCGTGGCGGCGTTTTGACTTGGATTTCGGCTTTTACC CCCTTCCCTGTCTGTCGCTTCTCCCTCGACTTCCGGCTTCGGAGGACATG TACAGCAGTGTAGAAGATATGAGATCCAAAACATGATCCCGTTGGTGGAG ATACCGTAGATACTCGTGGAGGCGAAGGCCTGTCGTGGGTGATCGTTTTT TTCGTCATCTATGTCGTCTACCATCCTGATGCTGTTGGATGCGCTGTGCC CTCGTTGAAATGGTCGGCCAGAAACCCTCTACAATCCTCACGTCCGCTTT CCGCGCAAATCCATCCCATGCAAGGCGGGACCCGGTTTTACCGACTGGCC ACGAAATGCATAAATCCTTGCTTTGTCGGGCGCTCTTGCACCCATTCCGA GCGCAGATGCGTTTCTATCTTCCCGGATGGGCAGGGGTTCGCGGTGGGAT CGATCGAGGGCCGCGTGGGGATCGAGTACTTCAGCGAACAAGCGGCCAAG GCACAGGCCGCATCGGGCTACAAGCCCGTCACAACCTACGGCGCAACGAA GCTCAGTTTTGCCTTCAAGTGCCACCGAGTCACGGTAAGGCTGACCATCT CCTGTGCAAACTATTCGAATGGTATGTTTCATGCTTTCATGTGTTGTCGT CGTTGTGGATTCTTGGCAGAGGGACCCATGGCAACATTGAGCGTTCGTCG TTACGAGGCGGAGGGACCCAGGCACCATTTAGCGTTCGTGGTTACGAGGA AGTTGCGCCTGTCTGGCGGTTTCTGGAAAGCTCGTTGATAGCGCTGCTGA TGAAAAGGATAGCGGTTGATTTTCTAGTCTTTGCATTCTCGGCGTGCCGG CTGCAGCTGCCCGGTTTCACTGAGTCCCAGCTGCAGGCAGGCAACTCTCG TTTGCACGTTAATTTTCATAGTCTCGCAGCTTGCTCAAGTGCCGCAGACG GCCGCAGTGTATTTGAACGCTGTAAATGTGAGCGTCCTCGGAGTAGCAGG GACAGGGACAGGGACAGTGATCGTGACGGCACCATTCCCGGCAGCGAGGC CGTTGCGTTGCAACCTGCAACATCGATGGCTTCTTGCCGAGCTTGTTCTT TGGTCTTCCCGCGTTCCCTGAAGTGTTACGATGGCGCTAGCAGCTGCCAA CGGGCTTCTTCTCCGCACTTGCGCACGTCATTGCTGTGTCGCGCGTTCAA TGCTTTGGTCACACTGAAGTATAGAGGCGGCGTATCTCATTCCCCGTCGT TGAGCTTTTAGAGAAAAAATACAACAAAACCGTTGAAACCCCTCCTGAGG TACTTCATTAGAGGCGGAGCTCGAGGCTTCCGTCTAGTTCCAAACACCGG GGGTTCATTGATGCGTGCTCGTAACGTTTGTAACTTACCGCAATTTCTTA AGGTTTATTCTTCCCTTTGGGTCCGTGCAACGTTCAACGTTCAACCTGCC ATCTATCGATTGCCACGTCCGTTTCGTTGATGCCGATGGATGGCTCCGTG GGTGCCGTTACCGTTACCGTTACCGCTGCCGCTGCCGTTACCTGTTTCTT GCGCTGTTTCTTTTGGGCTCGGCTGTGACACAACCGCTCTGGTGGCTTCT TCCACCGCTCTTTTGGGCGGGAGTGGAATTCCGTCTGCTGTTTTGGAGGT CGAGGTATTTTTCACAGTGAAAACAGCAGCAGCAGCAGCAGCAGCAGCAG CAACATCAACAACATCTACCTTCCAACGCCACGATATCGTTTCGTTCCAC GTCCGACGTGTGCAGGGCACACAAGCGTCGGTGTATTCGGTGAACTCTAT AGCGTTCCACAAGTACGGTACCTTCGCGACCGCTGGGTCGGATGGAAACT TCCACTTCTGGGATAAGGATTCCAGGCAACGGCTCAAGGCTTTCGACCTG AAGCAGGGGAACACGATCTCGGTGTGCAAGTTCAGTCCCGACGGCGGGCT TTTCGGGTGAGGCTTGCGGCTTTTTCTGAACAGCGCTATCGTGCGGCGGC CTTCGTTTAGCTGGTTACTGTCGTGGGAAATTGCGACGTTTGAACAGCCC CAACGTAGCGGTCAGTGAAATGGGCGACGACTGTTCTGCCCGTGTGGCCA ATGCGTTCAACTGCGATTCGCCCCACCAAACCTGGCCGCGTGACGAATAC GTAGTTGAAACTGGTACAGTACCGGTTATACCGTGGTAGTCGACGACCAT TCAGTAGATCCCTCCCTCCGTGTTACTTCCCAACTACCAACTACCAGGTA GTCGACATGGCAGGGCAGCTGCCGGAAAAAATGGTGTTTCGTACTGCGGT CCTCGTCCATTCGACCCACAGATCCTAAAGCACGCTTTAGGCTGACATCC TCCGTGTCATTGCGCTGGTTCGTGCTTCGTTTTTCATCGGTCAACACAAA CAAAAAAATGCCCCATCGTGGCATTCCTGTGGGCCATGTGGTGGCCGGAC GTGTTTCGTAGCTTTCTTTATAAAGGTGGCCCTGTTGCCCGTCCACGTCC TGCCCGAATCGGCTCACCTTTTTGGACCTGAATCGATTGTCGGCGTTTTT GTTCCGTTTCGTTTTTTGTTCTTGTTGTGGTTTGAAAACGCCGCCCACTT GATCAGTCGAGCTCCCTCTCGCTCTCTCTCTGACTTCGAGAACGCCCATC TTAATTAGCTGTTTTTTAGGGTTGTGAATCGGCTACCTTTTCCAATCTTT TAAAGATCTGCTGCGCCGATGTACAGATTAAATCGCGATTTAATTGGGCG AGCGCAGCGAGCCGTGATGGGGGCTCGCTTCGCGAGCCCCCCCTCGGCCC CCCCCGGCTGGTGAGGTGGCCTCGGCCCCCCCCGGCTGGTGAATTGGCCT CGGCCCCCCCCGGCTAGTGAGGGGGCCTCGCTGGAGGCGCCGCCGGAGGC AGGCAATTTGGCCCATTTGGCTTCATTTGCTTCAAAATCAGTGCGAAATC GAGGGTTGTTGGCACCGGTAGACTCTACGACAAGCAGAAAGAAGTAGCGA GAACAAACGGAAAAAAGAGAAAGGAAGAAAGATTAAAAACACAGAGTGTC GGCGAGTGCTGCGAACTGTGCCTAGGAAGAGCCGCAGCTGGCAACCAAAA AGAATAAAGCAGTAGGGTTTGGCTACTGCTGCTGCAGTATTGCAATATTG CTGAGCGGCTACTGCTGTAGCAGGCGACAAAGAAAAACCAGAAATAAAAC ATCAACGAAAACCCGAACAACACAACGCGCACTGCCGGCGCCGCTTTCTG GCCCTGCAGGGCTTTCGGTGGGATGCTGTTGGCTCGTGGACGCTTCTTCG TTCATGATCAAGCTACAAGTACAGCAGTTGGCACGCCGCGTGTGCGCCCC GCAGCAGCCCGGAAGGGGTCACACAAAAATACAAAAAAAAGTAGCCCCTC CCCTCTGTCCGAATAATGTGTGTTTTCGTCCCCAGGGTCGTGTGTGTGTC TGTGTGTCTTCCTATCTATGAAAAACTATGTGCATACGGCCTCTTGTACG TAAGAGGTTCCCCTTCGTCGGCGGGACGGCTGCTGCGCTTCAGTAACAGC CTCTTAAAACCCTAATTTACATATATCGGCTGTACATCGGCAATACATGG GAAGAAACATCGGCCCCGTTTTCCGATTCCGATATCGACTGTATCGGGCC GATTTAAAGCGAATAATCGGCTCCGATTCACAACTCTACTTTTTTTATGT TGGTTCTGTCTTCGAGTCAATGTTTTGCATCATGGATGCCATGGATGGCA ACCCGTACTTGGCGATGCCCCCTGCAAGTTTGTTCTTTTTCTTTCTCCAA CCTTTTTTTTCCGGCACATACGTACAAGTACCTAAAGGGAAGGGGGCGGC GACAGATAAAGATCCGGACATCCGCTTCTGTGTTGAGCATGAGAAGCAAG ACAAGCACAGCACCGACACGTACAAATGCATCGCTACCGTTCGTCACCTC GTTGTCGTGTCGTGTACGCACAGGTACGCATTAAGCTACGACTGGTCTCA GGGGGTGGAGCACGCCAATCCCCAAGGAACGAACAACATCATGGTGCACA CGGTTGCGGACGAAGAGATCAAGCCTCGACCAAAGGACAAGAAGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs80:5337..11733-

>mRNA_H-canaliculatus_M_contigs80.5.1 ID=mRNA_H-canaliculatus_M_contigs80.5.1|Name=mRNA_H-canaliculatus_M_contigs80.5.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=816bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs80:5337..11733- (Hapterophycus canaliculatus Oshoro7m male)
ATGTGGTCGCTGGGTCAGCCGGGCACTACAGGACAGCAGATCGGCGTGCA
CGATGCGGCGGTGAAAAGCGTCCGATTTATCCCGGAGATGAACCTCGTCG
CTAGCGCCTCGTGGGATCGCACAGTGAAGTTCTGGGACACTCGAACGTCC
AACCCCGCGGCGGTGGTTAACCTTTGCGAGAGGGCATACTCCATGGACAC
CCGGGGGGCGATGATGGTGGTCGCCACAGCCAACAGAAAGATCTGCGTAT
ACAACCTGGGCAGCTGGAATAACGGCCCTACGCCCCAAACGATGACCGAC
TCGCCTTTGAGATATCAAACCAGATGCGTTTCTATCTTCCCGGATGGGCA
GGGGTTCGCGGTGGGATCGATCGAGGGCCGCGTGGGGATCGAGTACTTCA
GCGAACAAGCGGCCAAGGCACAGGCCGCATCGGGCTACAAGCCCGTCACA
ACCTACGGCGCAACGAAGCTCAGTTTTGCCTTCAAGTGCCACCGAGTCAC
GGGCACACAAGCGTCGGTGTATTCGGTGAACTCTATAGCGTTCCACAAGT
ACGGTACCTTCGCGACCGCTGGGTCGGATGGAAACTTCCACTTCTGGGAT
AAGGATTCCAGGCAACGGCTCAAGGCTTTCGACCTGAAGCAGGGGAACAC
GATCTCGGTGTGCAAGTTCAGTCCCGACGGCGGGCTTTTCGGGTACGCAT
TAAGCTACGACTGGTCTCAGGGGGTGGAGCACGCCAATCCCCAAGGAACG
AACAACATCATGGTGCACACGGTTGCGGACGAAGAGATCAAGCCTCGACC
AAAGGACAAGAAGTGA
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