mRNA_H-canaliculatus_M_contigs80.5.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY0_ECTSI) HSP 1 Score: 523 bits (1347), Expect = 8.420e-186 Identity = 253/274 (92.34%), Postives = 260/274 (94.89%), Query Frame = 1
Query: 1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWN-NGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKDKK 819
VNMWSLGQPGTTGQQIGVHDAAVK+VRFIPEMNLVASASWDRTVKFWDTRTS PAAVV LCERAYSMDT+GAMMVVATA+RKICVYNLGSW NGP PQTMTDSPLRYQTRCVSIFPD QGFAVGSIEGRVGIEYFSEQAAK QAASGYKP TTYG TKLSFAFKCHRV G Q+SVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKA+DLKQGNTISVCKFSPDGGLFGYA+SYDWSQGVEHANPQ TNNI VH VAD+EIKPRPKDKK
Sbjct: 93 VNMWSLGQPGTTGQQIGVHDAAVKTVRFIPEMNLVASASWDRTVKFWDTRTSTPAAVVTLCERAYSMDTKGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPATTYGNTKLSFAFKCHRVAGAQSSVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 366
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: WD40-repeat-containing (domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU3_9STRA) HSP 1 Score: 278 bits (710), Expect = 4.730e-89 Identity = 145/277 (52.35%), Postives = 180/277 (64.98%), Query Frame = 1
Query: 1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVT----GTQASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKDKK 819
V W L G IG HDA V+ + +IP M+L+A+ SWD+T++FWD + NP + L ER Y ++ R +VV TA+RK VYNLG+ +++ +S L+YQTRC +IFPD G+AVGSIEGRV IEYFSE + +G TK FAFKCHR T +Q V+S+NSIAFH YGTFATAGSDG F+FWDKDSRQRLK F KQ TIS FSPDG L+ YA+SYDWSQGV A P + I +H V D+EIKPR K +K
Sbjct: 99 VKAWDLQGAGHPSMDIGKHDAPVRKMAWIPSMSLLATGSWDKTIRFWDMKQPNPVHTMTLSERVYDLEVRDNWLVVCTADRKNSVYNLGA---NCKLESVAESTLKYQTRCAAIFPDQTGYAVGSIEGRVAIEYFSELPNE----TGVPRALPASQTKRGFAFKCHRETLPQNKSQTGVFSINSIAFHPYGTFATAGSDGTFNFWDKDSRQRLKQFP-KQATTISTAAFSPDGSLYAYAVSYDWSQGVGGAQPGLPHEIKLHVVTDDEIKPRDKPRK 367
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTP8_9STRA) HSP 1 Score: 259 bits (662), Expect = 6.930e-82 Identity = 137/277 (49.46%), Postives = 172/277 (62.09%), Query Frame = 1
Query: 1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQ-------ASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPK 810
+ MW LGQP QQ+G HDA +K + E N+V + WD++V+ WD RT NP A + L ER Y+MD R ++VV TA RK+C+Y+L S N P + DSPLR+QTRCV+ FPD +GFA+GSIEGRVGI + + A FAFKCHR T ++Y+VNSIAFH GTFATAGSDG +++WDKDS+QRL F K TIS FSP GGL+ YALSYDWS+G E +PQ N IM+H V +EI R K
Sbjct: 101 LQMWRLGQP--QAQQVGKHDAPIKHCFHVAETNVVLTGGWDKSVRAWDCRTPNPVATIPLPERCYAMDVRHPLLVVGTAERKVCIYDLSS-ANWQQPYRVEDSPLRHQTRCVAAFPDREGFAIGSIEGRVGIHHVDPKNAHRN-----------------FAFKCHRETQDARAGQTGLCNIYAVNSIAFHHLGTFATAGSDGVYNYWDKDSKQRLMQFK-KAAQTISTACFSPSGGLYAYALSYDWSRGSESHSPQIPNQIMIHRVQKDEITQRNK 356
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Hypothetical (protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WN19_9STRA) HSP 1 Score: 255 bits (651), Expect = 9.910e-82 Identity = 134/271 (49.45%), Postives = 170/271 (62.73%), Query Frame = 1
Query: 7 MWSLGQ--PGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFH-KYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPK 810
MW LGQ P QQIG HDA +K VR++P NLV S WDR +KFWDTR+ NPA V+++ ER Y+MD R ++VVATA R + +Y++ P +SPL+YQ+RCV+ FPD G+AVGSIEGRVGI+Y + + SFAFKCHR + VYSVN+IAF ++GTFAT G+DG +FWDK++RQRLKAF TIS +F+ G LF YA SYDWS+G P N I +H DEEIKP+PK
Sbjct: 2 MWQLGQSPPNGVAQQIGAHDAPIKGVRYLPNSNLVVSGGWDRKLKFWDTRSPNPAGVLDMPERIYAMDVRNTLLVVATAGRHLIMYDVSGAQ--PREHQRKESPLKYQSRCVTCFPDASGYAVGSIEGRVGIQYIQKTP-----------------NRDSFAFKCHRQ---DSGVYSVNAIAFQQRFGTFATVGADGVVNFWDKENRQRLKAF-AAINRTISCAEFNSPGNLFAYASSYDWSKGSSVYAPGTANEIYIHYTPDEEIKPKPK 249
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1R3_AURAN) HSP 1 Score: 252 bits (643), Expect = 4.640e-79 Identity = 135/275 (49.09%), Postives = 167/275 (60.73%), Query Frame = 1
Query: 7 MWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVT-------GTQASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPK 810
MW+LGQP Q G HDA ++S+ F+P ++ V + SWD+T+K WD R P A V L ER YSMD +MVVATA RK+CVY+L + N P + DSPL++QTRCV FPD +GFA+GSIEGRV I + + A FAFKCHR T + ++Y+VN IAFH GTFATAGSDG F+FWDKDS+QRL AF + IS FSP G L+ YALSYDWS+G E P N IM+H V +EI R K
Sbjct: 100 MWTLGQP--QAQTFGKHDAPIRSIHFVPALSCVFTGSWDKTIKCWDVRQPTPTASVQLPERCYSMDVAHPLMVVATAERKLCVYDLSN-ANWQRPYRVEDSPLKHQTRCVRCFPDREGFAIGSIEGRVAIHHVDAKDAHKN-----------------FAFKCHRDTQDGRAGQASTCNIYAVNDIAFHNLGTFATAGSDGVFNFWDKDSKQRLMAFK-RADRPISCAAFSPAGTLYAYALSYDWSRGSESHTPTDPNTIMLHKVQKDEITQRNK 353
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD06_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.090e-76 Identity = 141/277 (50.90%), Postives = 163/277 (58.84%), Query Frame = 1
Query: 1 VNMWSLGQ--PGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGT-NNIMVHTVADEEIKPRPKDKK 819
V MW LG+ P QQIGVHD VKSV F+ NLV S WD +KFWDTR+ PA L ER Y +D RG +MVV TANRK+ VY++ + P + +SPL+YQTRCV FPD GFA GS+EGRVGI Y T A K FAFKCHR VYSVN IAF YGTFAT G+DG FWDKD++QRLKAF+ Q TIS F+ G LF YA SYDWS+G P T N I +H DEEIKP+ KK
Sbjct: 103 VRMWRLGETPPNNVAQQIGVHDKPVKSVGFLSSSNLVVSGGWDNKLKFWDTRSPTPAGEFVLPERIYDLDVRGNLMVVGTANRKLYVYDV---SGQPREHSTMESPLKYQTRCVRCFPDQTGFACGSLEGRVGIRY-----------------VTKVANKDHFAFKCHRQGN---DVYSVNDIAFQNTYGTFATVGADGVVTFWDKDNKQRLKAFNAIQ-QTISCAAFNAQGNLFAYASSYDWSKGSGFYAPGSTPNEIFIHYTPDEEIKPKAAKKK 355
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3S1_9STRA) HSP 1 Score: 245 bits (626), Expect = 1.500e-76 Identity = 134/273 (49.08%), Postives = 166/273 (60.81%), Query Frame = 1
Query: 1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKDK 816
+ MW LGQ T QQIG HDA +K+V F+ MN V + WDR +KFWD R+ NP V+++ ER Y+MD R ++VVATA R I VY+ N P +SPL+YQTR ++ F D GFAVGSIEGRVGI Y + K SFAFKCHR +VYSVN+IAF+ YGTFAT GSDG +FWDKD++QRLK F Q TI F+ G LF YA SYDWS+G H P N+I +H V +EEI+P+ K K
Sbjct: 100 LRMWQLGQQVTVPQQIGAHDAPIKTVGFLKSMNTVVTGGWDRKLKFWDCRSPNPVGVLDMPERVYAMDIRDTLLVVATAGRHILVYDC---NQQPREYLRKESPLKYQTRSIACFTDKTGFAVGSIEGRVGIHYVQKVP-----------------NKDSFAFKCHREN---VNVYSVNAIAFNNHYGTFATCGSDGIINFWDKDNKQRLKGFPAIQ-RTILAAAFNTQGNLFAYASSYDWSKGSMHMQPG--NDIFIHPVVEEEIRPKGKTK 346
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J4_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.910e-76 Identity = 133/278 (47.84%), Postives = 171/278 (61.51%), Query Frame = 1
Query: 1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTG-------TQASVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKD 813
++MW+L T+ IG H+A +KSV + E NL + WD ++ WD RT PAA + L ER Y+M +MVV TA RKI +Y+L S +N P +SPLR+QTRC++ FPD GFA+GSIEGRV I + + + A FAFKCHR T T ++Y+VNSI FHK+GTFATAGSDG ++FWDKDS+QRL AF NTI FSP G L+ YALSYDWS+G E+ NPQ N IM+H V +EEI+ R K+
Sbjct: 111 LHMWNLQTQQTS--VIGRHEAPIKSVHCVREFNLAVTGGWDNAIRCWDARTPTPAATITLPERCYAMAVNHPLMVVGTAERKILMYDL-SRSNWQQPMRFEESPLRHQTRCIATFPDRDGFAIGSIEGRVAIHHVNIKEAGRN-----------------FAFKCHRDTQENRVGQPTVCNIYAVNSIVFHKFGTFATAGSDGVYNFWDKDSKQRLMAFKAAP-NTIPCASFSPIGNLYAYALSYDWSRGSENYNPQTPNYIMLHHVKEEEIRQRKKN 367
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: WD40 (repeat-like protein n=1 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S8VY86_AURPU) HSP 1 Score: 243 bits (620), Expect = 1.760e-75 Identity = 131/280 (46.79%), Postives = 170/280 (60.71%), Query Frame = 1
Query: 1 VNMWSLGQPGTTGQQIGVHDAAVKSVRFIPEMN--LVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRV----TGTQASVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPKDKK 819
V+M LG TT Q + HDA +K V I N ++ + SWD+T+K+WD R PAA V ER Y+MDTR ++VVATA+R + ++NL N P SPL++QTR +S F D GFA+GSIEGR I+Y E+ A + F+FKCHR T Q++VYSVNSI+FH +GTF+TAGSDG FHFWDKD++ RLK + + G +IS FS DG +F YA+SYDW QG NPQ N +M+H V +E KPRP KK
Sbjct: 108 VSMLDLGSGSTTPQVVAAHDAPIKCVESITVNNSPMIVTGSWDKTIKYWDLRQQTPAASVQCKERVYAMDTRDQLLVVATADRWVEIFNL---NQPSQPYKQIQSPLKWQTRTISCFADATGFAIGSIEGRCAIQYVEEKDASSN-----------------FSFKCHRQNAPNTRDQSNVYSVNSISFHPVHGTFSTAGSDGTFHFWDKDAKHRLKGYP-EVGGSISCTDFSHDGNIFAYAVSYDWHQGYSGNNPQYPNKVMLHPVIGDECKPRPNSKK 366
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNW4_PHATC) HSP 1 Score: 242 bits (617), Expect = 3.720e-75 Identity = 133/273 (48.72%), Postives = 165/273 (60.44%), Query Frame = 1
Query: 1 VNMWSLGQ--PGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSNPAAVVNLCERAYSMDTRGAMMVVATANRKICVYNLGSWNNGPTPQTMTDSPLRYQTRCVSIFPDGQGFAVGSIEGRVGIEYFSEQAAKAQAASGYKPVTTYGATKLSFAFKCHRVTGTQASVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAFDLKQGNTISVCKFSPDGGLFGYALSYDWSQGVEHANPQGTNNIMVHTVADEEIKPRPK 810
V MW LG P QQIG HDA V+ V F+ N+V S WDR +KFWD R P A +++ ER Y+MD R ++VVATA R I Y++ + P +SPL+YQTRC++ FPD GFAVGSIEGRVGI Y + A + SFAFKCHR ++ YSVN IAF K +GTFAT GSDG +FWDKD++QRLK F+ Q TIS F+ G LF YA SYDWSQG H P N I +H VA++EI+P+ K
Sbjct: 105 VRMWQLGSAPPNNIPQQIGAHDAPVQGVGFLRATNIVVSGGWDRKLKFWDCRQPTPVATLDMPERVYAMDVRDNLLVVATAGRHIICYDV---SGQPREYLRKESPLKYQTRCIACFPDQMGFAVGSIEGRVGIHYVQKVAGRD-----------------SFAFKCHRQ---DSNAYSVNCIAFQKQFGTFATVGSDGIVNFWDKDNKQRLKGFNAIQ-RTISCAAFNEQGNLFAYASSYDWSQGSMHLQPG--NEIFIHNVAEDEIRPKGK 351 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs80.5.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs80.5.1 >prot_H-canaliculatus_M_contigs80.5.1 ID=prot_H-canaliculatus_M_contigs80.5.1|Name=mRNA_H-canaliculatus_M_contigs80.5.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=272bp MWSLGQPGTTGQQIGVHDAAVKSVRFIPEMNLVASASWDRTVKFWDTRTSback to top mRNA from alignment at H-canaliculatus_M_contigs80:5337..11733- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs80.5.1 ID=mRNA_H-canaliculatus_M_contigs80.5.1|Name=mRNA_H-canaliculatus_M_contigs80.5.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=6397bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs80:5337..11733- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs80:5337..11733- >mRNA_H-canaliculatus_M_contigs80.5.1 ID=mRNA_H-canaliculatus_M_contigs80.5.1|Name=mRNA_H-canaliculatus_M_contigs80.5.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=816bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs80:5337..11733- (Hapterophycus canaliculatus Oshoro7m male)back to top |