mRNA_H-canaliculatus_M_contigs782.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: Similar (to fetal globin inducing factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG8_ECTSI) HSP 1 Score: 107 bits (268), Expect = 3.750e-28 Identity = 56/95 (58.95%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 1 FFNNTALHRAASMGFTVITGYLLESGAEVDAVASDGWTPLHLACRWGRVGAIKALVNAGADVNKATKDGRFPSDLLKIHMSPRDRNEVLKLLGES 285
FFNNTALHR+ASMGFT ITGYLLESGAEVDAVA+DGWTPL P++LLKI MSPRDRNE LKLLG S
Sbjct: 23 FFNNTALHRSASMGFTAITGYLLESGAEVDAVANDGWTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPAELLKIEMSPRDRNETLKLLGSS 117
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PRQ8_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 1.090e-9 Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 19 LHRAASMGFTVITGYLLESGAEVDAVAS-DGWTPLHLACRWGRVGAIKALVNAGADVNKATKDGRFP 216
L+ AA G+ + L+E GA VD+V GWT LH+A GRVGA +AL+ AGADVNK ++ R P
Sbjct: 311 LYFAAMDGYDDVVAALIEGGANVDSVKEYSGWTALHVAAEEGRVGAARALLAAGADVNKVDQEDRTP 377
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: Protein (phosphatase 1 regulatory subunit 12A n=3 Tax=Hydra vulgaris TaxID=6087 RepID=T2MJI9_HYDVU) HSP 1 Score: 63.5 bits (153), Expect = 1.120e-9 Identity = 32/72 (44.44%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 13 TALHRAASMGFTVITGYLLE-SGAEVDAVASDGWTPLHLACRWGRVGAIKALVNAGADVNKATKDGRFPSDL 225
TALH AAS G+T + +L+ GA+V+ DGWTPLH A WG A + L + GAD +G+ P DL
Sbjct: 212 TALHVAASKGYTKVINIILKIPGADVNVKDCDGWTPLHAAVHWGSKSACELLTDFGADFEIMNNNGQTPCDL 283
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: ankyrin (repeat domain-containing protein 16-like n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158AC005) HSP 1 Score: 61.6 bits (148), Expect = 4.200e-9 Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 1
Query: 19 LHRAASMGFTVITGYLLESGAEVDAVASDGWTPLHLACRWG---RVGAIKALVNAGADVNKATKDGRFPSDLLKIHMSPRDRN-EVLKLLGE 282
LH AA + I YL+++GAEVDA+ WTPL LAC + +IK L+ AGA+++ KDG P +H++ R N ++KLL E
Sbjct: 87 LHEAAQFAKSDIVEYLIDNGAEVDAIKRADWTPLMLACTKDGPDAIESIKKLIKAGANLSLRNKDGWMP-----LHIASRVGNANIIKLLLE 173
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: ankyrin (repeat domain-containing protein n=1 Tax=Anaerotruncus sp. X29 TaxID=2304567 RepID=UPI001FADA4D8) HSP 1 Score: 61.6 bits (148), Expect = 4.530e-9 Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 1
Query: 64 LLESGAEVDAVASDGWTPLHLACRWGRVGAIKALVNAGADVNKATKDGRFPSDLLKIHMSPRDRNEVLKLLGE 282
L++ GA +D DG TPLHLA +GRV A+KAL+ AGADVN+ T +P L + + KLL E
Sbjct: 68 LIDLGANIDVAQHDGTTPLHLAALFGRVNAVKALLAAGADVNRKTNRSDWPGFLTPLDETLLQNRLPYKLLQE 140
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WHX2_9CRUS) HSP 1 Score: 58.5 bits (140), Expect = 6.520e-8 Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 4 FNNTALHRAASMGFTVITGYLLESGAEVDAVASDGWTPLHLACRWGRVGAIKALVNAGAD 183
F TAL AA + LL +GAEVDAV S+G+TPL AC+WG + ++ LV+ GAD
Sbjct: 189 FGRTALASAAMENLLQVMKALLAAGAEVDAVLSNGFTPLKYACKWGSLEGVRLLVDHGAD 248
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: NACHT (domain-containing protein n=1 Tax=Thyridium curvatum TaxID=1093900 RepID=A0A507B1B2_9PEZI) HSP 1 Score: 58.5 bits (140), Expect = 6.670e-8 Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 19 LHRAASMGFTVITGYLLESGAEVDAVASDGWTPLHLACRWGRVGAIKALVNAGADVNKATKDGRFPSDLLKI 234
LH A ++ I L+ GA+V+ SDGWTPLH ACR G G ++AL+ +G+ V+ KDG+ S L+ +
Sbjct: 943 LHEACAIRNPEIAAALIAKGADVNKPGSDGWTPLHRACRQGSFGVVEALLCSGS-VDIEAKDGQGLSSLMTL 1013
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: AAEL011910-PA (n=2 Tax=Stegomyia TaxID=53541 RepID=Q16NP6_AEDAE) HSP 1 Score: 57.4 bits (137), Expect = 1.700e-7 Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 4 FNNTALHRAASMGFTVITGYLLESGAEVDAVASDGWTPLHLACRWGRVGAIKALVNAGADVNKATKDGRFPSDLLKIHMSPRDRN-EVLKLL 276
+++TALH A ++G I YL+ESGAE++AV G TPLH+A + + A + L+ + AT D R S + + + RN +++KLL
Sbjct: 1411 YDSTALHVAIAIGCNEIAAYLMESGAEINAVTKFGDTPLHVAAKHSNIIAARMLI-----LKYATIDERNSSGMTPLVQAMYSRNLDIMKLL 1497
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: protein (phosphatase 1 regulatory subunit 12A-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DHP7_HYDVU) HSP 1 Score: 56.6 bits (135), Expect = 2.430e-7 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 1
Query: 13 TALHRAASMGFTVITGYLLE-SGAEVDAVASDGWTPLHLACRWGRVGAIKALVNAGAD 183
TALH AAS G+T + +L+ GA+V+ DGWTPLH A WG A + L + GAD
Sbjct: 212 TALHVAASKGYTKVINIILKIPGADVNVKDCDGWTPLHAAVHWGSKSACELLTDFGAD 269
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Anopheles TaxID=44482 RepID=A0A084VXP0_ANOSI) HSP 1 Score: 56.6 bits (135), Expect = 3.170e-7 Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 4 FNNTALHRAASMGFTVITGYLLESGAEVDAVASDGWTPLHLACRWGRVGAIKALVNAGADVNKATKDGRFPSDLLKIHMSPRDRN-EVLKLL 276
+++T+LH A ++ I YL+ESGAE++AV+ G TPLH+A + G + A + L+ + A D R S L + + RN E++KLL
Sbjct: 1424 YDSTSLHVAIAIDCNEIAAYLIESGAEINAVSKFGDTPLHVATKHGNIVAARMLI-----LKYAAIDERNTSGLTPLMQAMYSRNLEIMKLL 1510 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs782.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs782.1.1 >prot_H-canaliculatus_M_contigs782.1.1 ID=prot_H-canaliculatus_M_contigs782.1.1|Name=mRNA_H-canaliculatus_M_contigs782.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=95bp FFNNTALHRAASMGFTVITGYLLESGAEVDAVASDGWTPLHLACRWGRVGback to top mRNA from alignment at H-canaliculatus_M_contigs782:10592..11544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs782.1.1 ID=mRNA_H-canaliculatus_M_contigs782.1.1|Name=mRNA_H-canaliculatus_M_contigs782.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=953bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs782:10592..11544- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs782:10592..11544- >mRNA_H-canaliculatus_M_contigs782.1.1 ID=mRNA_H-canaliculatus_M_contigs782.1.1|Name=mRNA_H-canaliculatus_M_contigs782.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=285bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs782:10592..11544- (Hapterophycus canaliculatus Oshoro7m male)back to top |