mRNA_H-canaliculatus_M_contigs76647.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: PPM-type (phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.050e-26 Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 1
Query: 4 RVIEEVVGRAFLATDEEFLTTANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRAEVVSK 195
RVIE+VV AFLATDEEFLTTA+KPSSGSTATTAM++GDRFY FNVGDSRTILCR GRAEVVSK
Sbjct: 945 RVIEDVVTAAFLATDEEFLTTASKPSSGSTATTAMVLGDRFYGFNVGDSRTILCRAGRAEVVSK 1008
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEC0_HETAK) HSP 1 Score: 77.8 bits (190), Expect = 1.720e-15 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 1 ARVIEEVVG----RAFLATDEEFLTTANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRAEVVSK 195
AR+++E+V R F TDE +L T++ P GSTATT +IIG+RFY+FNVGDSRT+LCR G+ +VS+
Sbjct: 194 ARLLDELVAAGVARCFRRTDEHYLNTSDNPQCGSTATTVLIIGNRFYNFNVGDSRTLLCRNGKVRLVSQ 262
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: Putative (serine/threonine phosphatase 2C ptc2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP4_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 6.610e-13 Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 13 EEVVGRAFLATDEEFLTTANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRAEVVS 192
+E + AF A D+EF+ T+ P +GSTATT +++G R Y NVGDSRT+LCRGG+ + S
Sbjct: 145 KEAISEAFAAADKEFIATSRLPEAGSTATTCLVLGPRLYMANVGDSRTVLCRGGKVRMAS 204
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV88_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 3.380e-10 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 13 EEVVG---RAFLATDEEFLTTANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRAEVVS 192
E V+G +F+ TD+EF+ TA +GSTATT +++GDR Y NVGDSRT+LCR G A +S
Sbjct: 301 EIVIGALTESFIYTDKEFMRTAGHAQAGSTATTVLLLGDRAYCGNVGDSRTVLCRSGEAVPLS 363
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJ68_PYTIN) HSP 1 Score: 62.4 bits (150), Expect = 8.680e-10 Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 4 RVIEEVVGRAFLATDEEFLTTANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRA 180
R++EE + AF TDEEFLT++ +P +GSTATT G++ + NVGDSRT+L R G A
Sbjct: 377 RIVEESLVMAFERTDEEFLTSSERPQAGSTATTVFFAGNQMFVANVGDSRTVLSRRGLA 435
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: Phosphomannomutase (n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZ10_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 4.180e-9 Identity = 30/65 (46.15%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1 ARVIEEVVGRAFLATDEEFLTTANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRAEVVSK 195
+ ++++ + AF TD++FL +++P +GST TT I G R + NVGDSRTIL R GRA +SK
Sbjct: 514 SNLVQKQIVAAFERTDKDFLKKSDRPQAGSTGTTVFIAGKRLFVANVGDSRTILSRSGRAVALSK 578
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: PPM-type (phosphatase domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YTM7_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 4.910e-9 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 31 AFLATDEEFLTTANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRAEVVS 192
AF TDEEFL + +P +GSTATT + G + NVGDSRT+L RGG+AE +S
Sbjct: 100 AFERTDEEFLNESERPQAGSTATTVFVAGKYMFVSNVGDSRTVLSRGGKAERLS 153
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: Protein-serine/threonine (phosphatase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NE84_ARUDO) HSP 1 Score: 58.9 bits (141), Expect = 5.560e-9 Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 31 AFLATDEEFLTT-ANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRAEVVSK 195
A+ +TD EFL + +++ GSTA+TA+++GDR + NVGDSR I+CRGG A VSK
Sbjct: 60 AYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAVAVSK 115
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: Protein-serine/threonine (phosphatase n=2 Tax=Setaria TaxID=4554 RepID=K3Z9N1_SETIT) HSP 1 Score: 58.9 bits (141), Expect = 6.210e-9 Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 31 AFLATDEEFLTT-ANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRAEVVSK 195
A+ +TD EFL + +++ GSTA+TA+++GDR + NVGDSR I+CRGG A VSK
Sbjct: 101 AYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAVAVSK 156
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Match: Protein-serine/threonine (phosphatase n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1BQK3_9ORYZ) HSP 1 Score: 58.5 bits (140), Expect = 7.090e-9 Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 31 AFLATDEEFLTT-ANKPSSGSTATTAMIIGDRFYSFNVGDSRTILCRGGRAEVVSK 195
A+ +TD EFL + +++ GSTA+TA+++GDR + NVGDSR I+CRGG A VSK
Sbjct: 63 AYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSK 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76647.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs76647.1.1 >prot_H-canaliculatus_M_contigs76647.1.1 ID=prot_H-canaliculatus_M_contigs76647.1.1|Name=mRNA_H-canaliculatus_M_contigs76647.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=65bp ARVIEEVVGRAFLATDEEFLTTANKPSSGSTATTAMIIGDRFYSFNVGDSback to top mRNA from alignment at H-canaliculatus_M_contigs76647:56..250+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs76647.1.1 ID=mRNA_H-canaliculatus_M_contigs76647.1.1|Name=mRNA_H-canaliculatus_M_contigs76647.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=195bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76647:56..250+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76647:56..250+ >mRNA_H-canaliculatus_M_contigs76647.1.1 ID=mRNA_H-canaliculatus_M_contigs76647.1.1|Name=mRNA_H-canaliculatus_M_contigs76647.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=195bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76647:56..250+ (Hapterophycus canaliculatus Oshoro7m male)back to top |