mRNA_H-canaliculatus_M_contigs76306.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: 5-oxoprolinase ((ATP-hydrolysing) 5-oxoprolinase (ATP-hydrolysing) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG4_ECTSI) HSP 1 Score: 108 bits (269), Expect = 1.090e-25 Identity = 59/86 (68.60%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVDGAG-----------DVEDPDRKSRREAEMRLGGSVSGHRLGQEQA 225
+ GR+VSLGGKNTV V+AGDRLTILTPGGGGHG+P D+EDPDRKSRREAEMRLGGSVSGHRLGQEQA
Sbjct: 1232 NSGRSVSLGGKNTVKVNAGDRLTILTPGGGGHGTPXXXXXXXXXXXXXXXXXXXXDLEDPDRKSRREAEMRLGGSVSGHRLGQEQA 1317
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Hydantoinase (B/oxoprolinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL8_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 5.430e-10 Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 1
Query: 7 GRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVD 123
GR +SLGGKNT+ V GDRLTILTPGGGG+GSP S DV+
Sbjct: 1142 GRVISLGGKNTISVKEGDRLTILTPGGGGYGSPDSPDVE 1180
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: 5-oxoprolinase (n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WPJ0_9CHLO) HSP 1 Score: 58.5 bits (140), Expect = 3.160e-8 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVDGAGDVEDPDRKSRR---EAEMRLGGSVSGHRLGQEQA 225
+DGRTV+LGGKN V + G+RL ILTPGGGG GS D G E P K +R A R+GGSV+ ++ QE A
Sbjct: 1247 ADGRTVNLGGKNNVQLRGGERLRILTPGGGGCGS-----ADDKG--EQPTVKKQRIDYSAIARVGGSVAKYKADQESA 1317
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8HYZ2_OCTBM) HSP 1 Score: 58.2 bits (139), Expect = 4.280e-8 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 1
Query: 4 DGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVD--------GAGDVEDPDRKSRREA----EMRLGGSVSGHRLGQEQA 225
DGR V+LGGK +VHV AGD ++I+TPGGGG+G P S V G GD + + ++++ + GSV ++L QE A
Sbjct: 791 DGRVVNLGGKTSVHVTAGDMVSIVTPGGGGYGVPLSDSVQSHNISSRHGCGDENEDNEVAKKKLCKGQQHATKGSVYNYKLAQESA 876
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: LOW (QUALITY PROTEIN: 5-oxoprolinase n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A7E6FFD4_OCTVU) HSP 1 Score: 57.8 bits (138), Expect = 5.900e-8 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 1
Query: 4 DGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVD--------GAGDVEDPDRKSRREA----EMRLGGSVSGHRLGQEQA 225
DGR V+LGGK +VHV AGD L+I+TPGGGG+G P S V G G+ + + ++++ + GSV ++L QE A
Sbjct: 1154 DGRVVNLGGKTSVHVTAGDMLSIVTPGGGGYGVPLSDSVQSHNISSRHGCGNENEDNEVAKKKLCKGQQYATKGSVYNYKLAQESA 1239
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Aste57867_5034 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KC88_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 8.080e-8 Identity = 25/34 (73.53%), Postives = 32/34 (94.12%), Query Frame = 1
Query: 1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGS 102
+DGRT++LGGKNTV V+AGD LTIL+PGGGG+G+
Sbjct: 1239 TDGRTINLGGKNTVEVEAGDVLTILSPGGGGYGN 1272
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Uncharacterized (protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024US56_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 8.080e-8 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPT 108
SDGRTV+LGGKNTV V GD LTIL+PGGG +G+PT
Sbjct: 1241 SDGRTVNLGGKNTVEVVPGDVLTILSPGGGAYGAPT 1276
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Hydantoinase_B (domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B8H9_9CHLO) HSP 1 Score: 54.7 bits (130), Expect = 1.050e-7 Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 7 GRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMD-----------VDGAGDVEDPDRKSRREAEMRLGGSVSGHRLGQE 219
GRTV+LG K TVH++AGDRL ILTPGGGG G P D + G G D ++R+A + L GSV +R QE
Sbjct: 43 GRTVNLGAKATVHLEAGDRLRILTPGGGGFG-PEGADEAAAAALRKRRLGGDGHEGDGGPAAKRQA-VALKGSVEEYRRAQE 122
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Uncharacterized (protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C6Y8_CAFRO) HSP 1 Score: 57.0 bits (136), Expect = 1.110e-7 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVDGAGDVEDP 147
+DGR VSLGGK+TV V+AG+ L I TPGGGG G+P + + D G V P
Sbjct: 1386 TDGRIVSLGGKSTVQVEAGESLEIRTPGGGGFGAPDAAEADEDGTVFGP 1434
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Predicted (protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9U3L0_PHYPA) HSP 1 Score: 56.2 bits (134), Expect = 2.060e-7 Identity = 27/37 (72.97%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTS 111
+DGR + LGGKNTV V AG+RL ILTPGGGG GSP S
Sbjct: 1240 TDGRRLFLGGKNTVRVKAGERLQILTPGGGGWGSPDS 1276 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs76306.1.1 >prot_H-canaliculatus_M_contigs76306.1.1 ID=prot_H-canaliculatus_M_contigs76306.1.1|Name=mRNA_H-canaliculatus_M_contigs76306.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=76bp SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVDGAGDVEDPDback to top mRNA from alignment at H-canaliculatus_M_contigs76306:80..307+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs76306.1.1 ID=mRNA_H-canaliculatus_M_contigs76306.1.1|Name=mRNA_H-canaliculatus_M_contigs76306.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=228bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76306:80..307+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76306:80..307+ >mRNA_H-canaliculatus_M_contigs76306.1.1 ID=mRNA_H-canaliculatus_M_contigs76306.1.1|Name=mRNA_H-canaliculatus_M_contigs76306.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=228bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76306:80..307+ (Hapterophycus canaliculatus Oshoro7m male)back to top |