mRNA_H-canaliculatus_M_contigs76306.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs76306.1.1
Unique NamemRNA_H-canaliculatus_M_contigs76306.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: 5-oxoprolinase ((ATP-hydrolysing) 5-oxoprolinase (ATP-hydrolysing) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG4_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.090e-25
Identity = 59/86 (68.60%), Postives = 64/86 (74.42%), Query Frame = 1
Query:    1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVDGAG-----------DVEDPDRKSRREAEMRLGGSVSGHRLGQEQA 225
            + GR+VSLGGKNTV V+AGDRLTILTPGGGGHG+P                    D+EDPDRKSRREAEMRLGGSVSGHRLGQEQA
Sbjct: 1232 NSGRSVSLGGKNTVKVNAGDRLTILTPGGGGHGTPXXXXXXXXXXXXXXXXXXXXDLEDPDRKSRREAEMRLGGSVSGHRLGQEQA 1317          
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Hydantoinase (B/oxoprolinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL8_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 5.430e-10
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 1
Query:    7 GRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVD 123
            GR +SLGGKNT+ V  GDRLTILTPGGGG+GSP S DV+
Sbjct: 1142 GRVISLGGKNTISVKEGDRLTILTPGGGGYGSPDSPDVE 1180          
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: 5-oxoprolinase (n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WPJ0_9CHLO)

HSP 1 Score: 58.5 bits (140), Expect = 3.160e-8
Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 1
Query:    1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVDGAGDVEDPDRKSRR---EAEMRLGGSVSGHRLGQEQA 225
            +DGRTV+LGGKN V +  G+RL ILTPGGGG GS      D  G  E P  K +R    A  R+GGSV+ ++  QE A
Sbjct: 1247 ADGRTVNLGGKNNVQLRGGERLRILTPGGGGCGS-----ADDKG--EQPTVKKQRIDYSAIARVGGSVAKYKADQESA 1317          
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8HYZ2_OCTBM)

HSP 1 Score: 58.2 bits (139), Expect = 4.280e-8
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 1
Query:    4 DGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVD--------GAGDVEDPDRKSRREA----EMRLGGSVSGHRLGQEQA 225
            DGR V+LGGK +VHV AGD ++I+TPGGGG+G P S  V         G GD  + +  ++++     +    GSV  ++L QE A
Sbjct:  791 DGRVVNLGGKTSVHVTAGDMVSIVTPGGGGYGVPLSDSVQSHNISSRHGCGDENEDNEVAKKKLCKGQQHATKGSVYNYKLAQESA 876          
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: LOW (QUALITY PROTEIN: 5-oxoprolinase n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A7E6FFD4_OCTVU)

HSP 1 Score: 57.8 bits (138), Expect = 5.900e-8
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 1
Query:    4 DGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVD--------GAGDVEDPDRKSRREA----EMRLGGSVSGHRLGQEQA 225
            DGR V+LGGK +VHV AGD L+I+TPGGGG+G P S  V         G G+  + +  ++++     +    GSV  ++L QE A
Sbjct: 1154 DGRVVNLGGKTSVHVTAGDMLSIVTPGGGGYGVPLSDSVQSHNISSRHGCGNENEDNEVAKKKLCKGQQYATKGSVYNYKLAQESA 1239          
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Aste57867_5034 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KC88_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 8.080e-8
Identity = 25/34 (73.53%), Postives = 32/34 (94.12%), Query Frame = 1
Query:    1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGS 102
            +DGRT++LGGKNTV V+AGD LTIL+PGGGG+G+
Sbjct: 1239 TDGRTINLGGKNTVEVEAGDVLTILSPGGGGYGN 1272          
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Uncharacterized (protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024US56_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 8.080e-8
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 1
Query:    1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPT 108
            SDGRTV+LGGKNTV V  GD LTIL+PGGG +G+PT
Sbjct: 1241 SDGRTVNLGGKNTVEVVPGDVLTILSPGGGAYGAPT 1276          
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Hydantoinase_B (domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B8H9_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 1.050e-7
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 1
Query:    7 GRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMD-----------VDGAGDVEDPDRKSRREAEMRLGGSVSGHRLGQE 219
            GRTV+LG K TVH++AGDRL ILTPGGGG G P   D           + G G   D    ++R+A + L GSV  +R  QE
Sbjct:   43 GRTVNLGAKATVHLEAGDRLRILTPGGGGFG-PEGADEAAAAALRKRRLGGDGHEGDGGPAAKRQA-VALKGSVEEYRRAQE 122          
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Uncharacterized (protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C6Y8_CAFRO)

HSP 1 Score: 57.0 bits (136), Expect = 1.110e-7
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 1
Query:    1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVDGAGDVEDP 147
            +DGR VSLGGK+TV V+AG+ L I TPGGGG G+P + + D  G V  P
Sbjct: 1386 TDGRIVSLGGKSTVQVEAGESLEIRTPGGGGFGAPDAAEADEDGTVFGP 1434          
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Match: Predicted (protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9U3L0_PHYPA)

HSP 1 Score: 56.2 bits (134), Expect = 2.060e-7
Identity = 27/37 (72.97%), Postives = 30/37 (81.08%), Query Frame = 1
Query:    1 SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTS 111
            +DGR + LGGKNTV V AG+RL ILTPGGGG GSP S
Sbjct: 1240 TDGRRLFLGGKNTVRVKAGERLQILTPGGGGWGSPDS 1276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76306.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
5-oxoprolinase1.090e-2568.60(ATP-hydrolysing) 5-oxoprolinase (ATP-hydrolysing)... [more]
Hydantoinase5.430e-1074.36B/oxoprolinase-domain-containing protein n=1 Tax=T... [more]
5-oxoprolinase3.160e-850.00n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8... [more]
Uncharacterized4.280e-840.70protein (Fragment) n=2 Tax=Octopus bimaculoides Ta... [more]
LOW5.900e-840.70QUALITY PROTEIN: 5-oxoprolinase n=1 Tax=Octopus vu... [more]
Aste57867_50348.080e-873.53protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Uncharacterized8.080e-875.00protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A... [more]
Hydantoinase_B1.050e-746.34domain-containing protein n=1 Tax=Chlamydomonas sc... [more]
Uncharacterized1.110e-757.14protein n=5 Tax=Cafeteria roenbergensis TaxID=3365... [more]
Predicted2.060e-772.97protein n=3 Tax=Physcomitrium patens TaxID=3218 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76306contigH-canaliculatus_M_contigs76306:80..307 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FNG4
PFAMsHydant_A_N,Hydantoinase_A,Hydantoinase_B
Model size228
Max annot lvl2759|Eukaryota
KEGG rclassRC00553
KEGG koko:K01469
KEGG ReactionR00251
KEGG Pathwayko00480,map00480
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0017168,GO:0034641,GO:0042221,GO:0043603,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0051716,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:1901564,GO:1990748
Exons1
Evalue1.78e-26
EggNOG OGsCOG0145@1|root,KOG1939@2759|Eukaryota
EC3.5.2.9
Description5-oxoprolinase (ATP-hydrolyzing) activity
Cds size228
COG categoryEQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854101.5689063-CDS-H-canaliculatus_M_contigs76306:79..3071696854101.5689063-CDS-H-canaliculatus_M_contigs76306:79..307Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs76306 80..307 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76306.1.1prot_H-canaliculatus_M_contigs76306.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs76306 80..307 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs76306.1.1

>prot_H-canaliculatus_M_contigs76306.1.1 ID=prot_H-canaliculatus_M_contigs76306.1.1|Name=mRNA_H-canaliculatus_M_contigs76306.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=76bp
SDGRTVSLGGKNTVHVDAGDRLTILTPGGGGHGSPTSMDVDGAGDVEDPD
RKSRREAEMRLGGSVSGHRLGQEQA*
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mRNA from alignment at H-canaliculatus_M_contigs76306:80..307+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs76306.1.1 ID=mRNA_H-canaliculatus_M_contigs76306.1.1|Name=mRNA_H-canaliculatus_M_contigs76306.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=228bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76306:80..307+ (Hapterophycus canaliculatus Oshoro7m male)
AGCGACGGCCGCACGGTAAGTCTCGGCGGCAAGAACACCGTGCACGTGGA TGCCGGCGACCGCCTCACCATCCTCACCCCCGGTGGCGGCGGCCACGGCA GCCCCACGTCAATGGACGTGGACGGCGCGGGAGACGTCGAGGATCCTGAC CGCAAGTCCAGGCGAGAGGCGGAGATGAGGCTTGGGGGCAGCGTGTCCGG GCACCGCCTCGGCCAGGAGCAAGCGTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs76306:80..307+

>mRNA_H-canaliculatus_M_contigs76306.1.1 ID=mRNA_H-canaliculatus_M_contigs76306.1.1|Name=mRNA_H-canaliculatus_M_contigs76306.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=228bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs76306:80..307+ (Hapterophycus canaliculatus Oshoro7m male)
AGCGACGGCCGCACGGTAAGTCTCGGCGGCAAGAACACCGTGCACGTGGA
TGCCGGCGACCGCCTCACCATCCTCACCCCCGGTGGCGGCGGCCACGGCA
GCCCCACGTCAATGGACGTGGACGGCGCGGGAGACGTCGAGGATCCTGAC
CGCAAGTCCAGGCGAGAGGCGGAGATGAGGCTTGGGGGCAGCGTGTCCGG
GCACCGCCTCGGCCAGGAGCAAGCGTAG
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