mRNA_H-canaliculatus_M_contigs7598.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7598.2.1
Unique NamemRNA_H-canaliculatus_M_contigs7598.2.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 1.120e-146
Identity = 267/323 (82.66%), Postives = 281/323 (87.00%), Query Frame = 1
Query:    1 STGGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPALTPSDLVKNVPRRFATFWVDSGPASTAAAVQATVTTGEAPGTRRGRQDGGVGGGR 969
            +TGGLTVL G FLT+LSVLGSSIAHVNPTFVFDELVVTHYCGS GGL+GLVVTA+TQQAVAQGYKVVGSMELLGDPLSLV KLGDSV QFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENES +ER  ++D QLQ EVK LEHGVKQGGKVFYETM+AGITGLIDRPAEGAKEEG AGFIAGMAKG  XXXXXXXXXX  AVSRVTEGVDASTRLSDEKRMGRRRAARTAF S   GRALP LTP+DLVKNVPR+FAT WV +G  +T  A+   V  GE    R  +  G VG GR
Sbjct: 1096 TTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMER--EEDGQLQREVKGLEHGVKQGGKVFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXAVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGTGLEATGVALP--VPEGEEAEERDRKPAGDVGSGR 1414          
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 4.310e-136
Identity = 255/325 (78.46%), Postives = 269/325 (82.77%), Query Frame = 1
Query:    1 STGGLTVLSGSFLTLLSVLGS---------------------------SIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPALTPSDLVKNVPRRFATFWVDSGPASTAAAV 894
            +TGGLTVL G FLT+LSVLGS                           SIAHVNPTFVFDELVVTHYCGS GGL+GLVVTA+TQQAVAQGYKVVGSMELLGDPLSLV KLGDSV QFFTKTKAEMTGDADTVGAGAK+LVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENES +ER  +DD QLQ EVKDLE GVKQGGK+FYETM+AGITGLIDRPAEGAKEEG AGFIAGMAKG  XXXXXXXXXX   VSRVTEGVDASTRLSDEKRMGRRRAARTAF S   GRALP LTP DLVKN+PR+FAT WV +G  +T  A+
Sbjct: 2730 TTGGLTVLGGGFLTVLSVLGSRRVPCSLIVIALACRCSWVTILWAETLSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMER--EDDGQLQREVKDLEQGVKQGGKIFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPIDLVKNIPRKFATLWVGTGLEATGVAL 3052          
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA)

HSP 1 Score: 250 bits (639), Expect = 3.220e-74
Identity = 156/311 (50.16%), Postives = 192/311 (61.74%), Query Frame = 1
Query:    7 GGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYK---------------------------VVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGK--------VFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPALTPSDLVKNV 834
            GGL VL GSFL+ + VLG ++A ++PTFVFDEL+VTHY GS   L+  +   + QQ VAQGYK                           VVGSMELLGDPL+LV+KL DSV QF   T+AE  G+  T GAGA++LV G+VGG FGSAAKI GSLE +IRGLSGT +A+     E GGD        V+ L+HG ++GG+        V Y++++ GI+GL+DRP EGAKEEG AGF+ GMAKGIV          LGAVS+VTEGVDASTR    +RMGRRR  R    SA  G  L  LT   +  N+
Sbjct:  296 GGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVAD----AEGGGDT------RVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPR----SAQPGCPLAVLTRDMMAANL 592          
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.460e-52
Identity = 116/276 (42.03%), Postives = 162/276 (58.70%), Query Frame = 1
Query:   10 GLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPALTPSDLVKNVP 837
            G+ ++  S  ++L VLGSS+AH+NPTF F+EL +    G    L+  +  ++ +Q VAQGYKVVGSMELLGDP+SLVS +G  V QFF KT A+M G+++T G G K L +G+VGGTFGS AKITG+ + ++  ++G    +N    E  G               G+  G +  +  +  GITG++ RP EGA++ G  GF+ G+ KG+V           GAVS VTE VDA+ +  DE+ MGRRR  R+          L  LT S L +N+P
Sbjct:  251 GVWLMGSSLWSMLVVLGSSLAHINPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYKVVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSAVTGQNERDNWQRPEHVG--------------QGIVIGSERVWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVGAVAAPVAGAFGAVSAVTESVDANLKYWDERPMGRRRNTRSGTG------LLQPLTVSHLNENIP 506          
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Ph (domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.950e-41
Identity = 106/288 (36.81%), Postives = 159/288 (55.21%), Query Frame = 1
Query:   10 GLTVLSGSFLTLLSVLGSSIAHVNP-TFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSL------------------EGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEH---GVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPAL 807
            GL ++    + LL+ +  S+A ++  T VF+EL+ THY GS   L  +VV ++ QQA+ Q YK++G+M+LLG+PL+L    G  V +FF +T+AE+ GDAD+ G G + L K ++GG F S +KITG++                  EGM   LS +         E GG   D  +G     +H   G+ +GG+VFY+++++G+  + D P +GA  EGF+GF+ GM KG+V          LG +SRVT   D +      + + RRRA R A  S    +ALP L
Sbjct: 3962 GLELIGTGVVQLLADMARSLAQLSGLTLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQSYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASLLEEVVGVREMAAMAEEGMRDELSSSTARAIGHQTEDGGSSADGWRGRAPPPQHLGEGILKGGEVFYKSVKSGVKNIYDLPQQGASREGFSGFLKGMGKGVVGALAAPLIGTLGGISRVT---DTTAYFEKPRILRRRRAVRVALES----QALPLL 4242          
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 4.720e-39
Identity = 100/240 (41.67%), Postives = 139/240 (57.92%), Query Frame = 1
Query:   43 LLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEH---GVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRR 753
            LLS  G+ IA+ +PTF FD   + HY GS      LVV +  +Q V Q YKV+G +++LGDPLSL   +   V  F TKT       A  +G G+K LVKG+VGGT  SA+K+T +L+  +R  +G   AE  SG+E             K  EH   G+ QG   F  T++ GITG++ +P  GA++ G AGF+ G+ +G+V          LGA S++T G+DA+TRL D++ MGRRR
Sbjct: 2622 LLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTLVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMES-----------TKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDEPMGRRR 2843          
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.150e-31
Identity = 101/237 (42.62%), Postives = 138/237 (58.23%), Query Frame = 1
Query:   43 LLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRR 753
            LLS  G+ IA+ +PTF FD   + HY GS       VV +  +Q V Q YKV+G +++LGDPLSL   +   V  F TKT       A  +G G+K LVKG+VGGT  SA+K+T +L+  +R  +G   AE  SG+E         +   + L  G+ QG   F  T++ GITG++ +P  GA++ G AGF+        XXXXXXXXXX    S++T G+DA+TRL D+  MGRRR
Sbjct: 1526 LLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTQVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMES--------KKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGAAGFVKXXXXXXXXXXXXXXXXXXXXXSKITAGIDATTRLLDDDPMGRRR 1747          
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2QD77_PHYPN)

HSP 1 Score: 112 bits (279), Expect = 1.710e-23
Identity = 73/211 (34.60%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    7 GGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGI 639
            GG +V+ G    ++ ++GS+++  +PTF F E+V+     +   L   +V    QQ V Q Y++VGS +++G+P+ LV  LG  V +F   TK E+TGDA T G G KVL K +V     S AKITGSL+  +   S                 DD+    V+DL +     G  F + +  G TG+  +P EGA + G  G + G  +GI
Sbjct: 2287 GGHSVIFGFLSQIIGLIGSNLSG-SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVGEFS-----------------DDKPDPSVEDLSN--DNAGIKFAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGI 2477          
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGV5_BRELC)

HSP 1 Score: 111 bits (277), Expect = 3.110e-23
Identity = 74/211 (35.07%), Postives = 112/211 (53.08%), Query Frame = 1
Query:    7 GGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGI 639
            GG +++ G    ++ ++GS+++  +PTF F E+V+     +   L   +V    QQ V Q Y+++GS +++G+P+ LV  LG  V +F   TK E+TGDA T G G KVL K +V  +  S AKITGSL+  +    G    EN     R  DDD    G +     G+K     F + +  G TG+  +P EGA + G  G + G  +GI
Sbjct: 2287 GGHSIVFGGLSQIIGLIGSNLSG-SPTFSFSEIVIVRCFTTKQRLQSQLVANYVQQGVLQAYRLIGSADIIGNPIGLVEDLGSGVVEFLKITKGEITGDAQTRGEGVKVLGKTIVKSSASSVAKITGSLDKFV----GEFADEN-----RQNDDD----GSMSTDNAGIK-----FAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGI 2478          
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AC94_PHYSP)

HSP 1 Score: 110 bits (276), Expect = 4.210e-23
Identity = 72/211 (34.12%), Postives = 108/211 (51.18%), Query Frame = 1
Query:    7 GGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGI 639
            GG +V+ G    ++ ++GS+++  +PTF F E+V+     +   L   +V    QQ V Q Y++VGS +++G+P+ LV  LG  V +F   TK E+TGDA T G G KVL K +V     S AKITGSL+  +        A++ S    GG+D                  G  F + +  G TG+  +P EGA + G  G + G  +GI
Sbjct: 2286 GGHSVIFGFLSQVVGLIGSNLSG-SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVG-----EFADDSSASASGGNDSSSND-----------NAGLKFAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGI 2479          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.120e-14682.66protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.310e-13678.46protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.220e-7450.16protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical2.460e-5242.03protein (Fragment) n=2 Tax=Dictyocha speculum TaxI... [more]
Ph4.950e-4136.81domain containing protein n=4 Tax=Monodopsidaceae ... [more]
Uncharacterized4.720e-3941.67protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.150e-3142.62protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.710e-2334.60protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2Q... [more]
Uncharacterized3.110e-2335.07protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A... [more]
Uncharacterized4.210e-2334.12protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7598contigH-canaliculatus_M_contigs7598:1815..4787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G2C7
PFAMsArfGap,C2,Glyco_transf_28,UDPGT,UIM
Model size981
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K01870,ko:K12486
KEGG ReactionR03656
KEGG Pathwayko00970,ko04144,map00970,map04144
KEGG ModuleM00359,M00360
Hectar predicted targeting categorysignal peptide
Exons6
Evalue1.84e-147
EggNOG OGsCOG5043@1|root,KOG1809@2759|Eukaryota
EC6.1.1.5
Descriptionregulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
Cds size981
COG categoryU
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7598.2.1prot_H-canaliculatus_M_contigs7598.2.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7598 1815..4787 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854097.4876077-CDS-H-canaliculatus_M_contigs7598:1814..20761696854097.4876077-CDS-H-canaliculatus_M_contigs7598:1814..2076Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7598 1815..2076 -
1696854097.5017023-CDS-H-canaliculatus_M_contigs7598:2399..25901696854097.5017023-CDS-H-canaliculatus_M_contigs7598:2399..2590Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7598 2400..2590 -
1696854097.5121913-CDS-H-canaliculatus_M_contigs7598:2948..30911696854097.5121913-CDS-H-canaliculatus_M_contigs7598:2948..3091Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7598 2949..3091 -
1696854097.5224786-CDS-H-canaliculatus_M_contigs7598:3618..37571696854097.5224786-CDS-H-canaliculatus_M_contigs7598:3618..3757Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7598 3619..3757 -
1696854097.5352814-CDS-H-canaliculatus_M_contigs7598:4153..43341696854097.5352814-CDS-H-canaliculatus_M_contigs7598:4153..4334Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7598 4154..4334 -
1696854097.5529957-CDS-H-canaliculatus_M_contigs7598:4722..47871696854097.5529957-CDS-H-canaliculatus_M_contigs7598:4722..4787Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7598 4723..4787 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7598.2.1

>prot_H-canaliculatus_M_contigs7598.2.1 ID=prot_H-canaliculatus_M_contigs7598.2.1|Name=mRNA_H-canaliculatus_M_contigs7598.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=327bp
STGGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGL
VVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTG
DADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGV
ERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEE
GFAGFIAGMAKGIVGAVAAPVAGALGAVSRVTEGVDASTRLSDEKRMGRR
RAARTAFTSASRGRALPALTPSDLVKNVPRRFATFWVDSGPASTAAAVQA
TVTTGEAPGTRRGRQDGGVGGGRERA*
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mRNA from alignment at H-canaliculatus_M_contigs7598:1815..4787-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7598.2.1 ID=mRNA_H-canaliculatus_M_contigs7598.2.1|Name=mRNA_H-canaliculatus_M_contigs7598.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2973bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7598:1815..4787- (Hapterophycus canaliculatus Oshoro7m male)
TCTACAGGAGGACTTACCGTCCTGAGCGGGAGCTTCCTCACGCTGCTGTC AGTCTTGGGGAGCAGGTGAGAGCAAACCGCTATCCCAATCTCGTTTTTCT GAAACATCTTGCTCTTCGTCCGTTCAGTTTCTTCCGCGCTATCGCAGCTG CACTCCGCGGCCATCGCGTGGCTTTGTCCCGGGGCAAGGAAAAGAGAAGA AGCCCGGCGAACGCCTGCCGACTTTATTCAGGTCGTCGGTCGCTGGGGTC GGGGCTCGAACGCCACTTTGTTCTTACCGACTGCGCTGTGATACTCGCGA CGTTGCCGGTCGGTCCGCTCTCGAGCTCCTCGACACCGTCCGTCGAAAAA AGGAGAAACCTCGAAAACCTCAAAACCTCAAAACCTTCCTCTTGCCACTG CTCGCACTCGACGCTCCCCTTGCGTTACGAATCCCGAACTGCCACTGCTA CAGCATCGCCCACGTCAACCCCACGTTCGTGTTCGACGAGCTCGTGGTGA CCCACTACTGCGGCAGCATCGGCGGCCTGTCCGGGCTGGTCGTGACGGCC ATCACGCAGCAGGCCGTGGCTCAGGGCTACAAGGTGGTCGGTTCTATGGA GCTGCTGGGCGACCCGCTATCACTCGTCAGCAAGGTGCGCGCGTGTGTGT TCGCACCGGCGGTGGTTGTGGACAGGGAAAGCGGCAAGTAGCGCGGCGTT TTTTTTTCATCTTGCTGCGAAGTGCGTAGCTGTGGACCGCGGCCCCCTCA GCTCCTGAGGGCGGCGTCCTTACGCCTGCCCACGCTCCGGCTCGGGCCCC GAGTTGTCGGCGAAGGCCAGGCGTTGTTCCCCTTCCCCGAGCTCGCTCAT GGAGCGAGCCGTAGGACCCGTTTGCAACGTGCTGCGTTCTTGAGGTCTCT GTTGCAACAACCTATTCGGTGCACCTTGGTAGTTCGTCAGGTAATGTAGC AGCAGCAGTAGCGCCCGCAGGAGCTGCCTGACGTCGAACATTATCCGATC CCCCTGCCTTTGCTTTTATTTCGCATGCAGCTGGGGGATAGTGTTGCCCA GTTCTTCACCAAGACCAAGGCTGAGATGACCGGCGATGCTGACACCGTGG GGGCGGGGGCCAAGGTGCTGGTCAAGGGGCTTGTGGGCGGCACGTTTGGT AGCGCCGCGAAGATCACCGGTGAGCTCCAAGCACAAAATTTCGGCGATTT TCGTAGTGTGTCTTCCATTTTGGCTGCTTGGCTGCCCGATTGCCCGTTTT CTCGGTTGCCCCTGCTTTGTTAGCGCCAAGGAGTGTGGCTTCTCGCTAGC GCCCACAAGCCGACGGGGCTCTAGCCTACCAGATCTGTTCGTCGATGATG GCAAATCGAGCAGCTACTTGTAATTCTTCCTTGGCTTCGTCCCAAAAATG TTCATTCGTTGAGTCTCACCCGTGGAGCTGCCACACTCCTGTTGCTCGGC ACGATCCACACCTCGTGTCTTACTTGGCAAGTTTTCCAGGGCGAACGCTT GAGCCGGTGTTCCTTGCCTGTGACCTTTGCTTTTGCCTCTTTCCTTTTGT CGCCGTTGATACCTTTACCGTTTCCAACGTACGAAGTCTCTTGAGGTTGC TAAATAGCCTCGAATCATGAGCTTCCTGTTTGTTTTTCCCCATTCATGCC ACCTTGTCGAGATCCTCATCGAGTTTATCTCCGCTTTATTTGCCAGGATC TTTGGAAGGCATGATCCGTGGTCTGAGTGGTACAGCCATCGCCGAGAACG AGTCCGGGGTTGAGCGCGGCGGTGATGACGACGACCAGCTGCAGGGGGAA GTCAAAGACTTAGAGCACGGGGTGAAGCAGGGTGGCAAGGTGTGCTTCAT ACATTTCTTTTTGTTGCCAAGTGAAACTAGTCGATATTCGTCCGAGATCA AATGCTCTCACGGAGAATCGGTGGTGTTCTATCGGTCCGGCCTTTTCTCT TCTCCTGAAAAGTTAAAAATCAGGTGGAAACGCTGTGTTCGCGTTTGCTG CTCTGGATGGGTGGCGATCGCTCTCTCGTCGTTCATTTGTAAAAACGGAC GAGAGATCGACTTCTGCTCCAAAAGGTCGCGCACGGCGCGAGGCCACTTG CGATGCTGCTGGCGCCATTCCGTATCGAGGTGCCCTCACGAACGCGTGGC AAAAACCATGAACGCCCTACGCCCGTGTCGCATCCTTCCAATGGCAGGTT TTCTACGAGACGATGAGGGCTGGGATCACGGGGTTGATAGACCGGCCGGC CGAGGGCGCAAAGGAAGAGGGCTTCGCGGGGTTCATCGCCGGCATGGCAA AGGGGATCGTGGGTGCTGTAGCAGCGCCGGTGGCGGGGGCGCTCGGGGCG GTCTCCCGCGTGACAGAGGGTGTGGACGCCTCGACGAGGTGAGAAAATAG AAAATAGGAGAGGCTAGTGGGCGAGAGGGGTTTTGGATGCGTCTGTGGCT AGTCTTGTCCGTGTGCGGAACGTGTTAACTCCAAGGGGACCTCGCTTTCG CTCGGGGTTGCTGGTCTGCCTTGTTGGGTATTGTGGCCTTGCGTTTGGAG TGGTTGCTGATGTTTTCGTGGAATCGGGACGTCCTGTCTATGTGAGCAAG AGATGCACACACCTGTATATTCAAGGGGCCTCTGGCCCTGCTGTTCGGCC CTCGCCTCCCCTCCCCGACGTCCGCATCGCCACATCTGACGCGCCAAACC ATCCATTCCAGGCTCTCCGACGAAAAGCGAATGGGGAGGCGTCGTGCCGC GAGGACGGCGTTCACGTCGGCATCCAGGGGCAGGGCGCTTCCCGCGCTCA CCCCAAGCGACCTCGTCAAGAACGTTCCGAGAAGGTTCGCGACGTTTTGG GTCGATAGCGGCCCGGCGTCCACCGCAGCGGCGGTGCAGGCAACCGTGAC AACGGGAGAGGCACCAGGGACGAGGCGTGGGAGGCAGGATGGTGGGGTTG GGGGAGGGCGGGAGCGAGCGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7598:1815..4787-

>mRNA_H-canaliculatus_M_contigs7598.2.1 ID=mRNA_H-canaliculatus_M_contigs7598.2.1|Name=mRNA_H-canaliculatus_M_contigs7598.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=981bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7598:1815..4787- (Hapterophycus canaliculatus Oshoro7m male)
TCTACAGGAGGACTTACCGTCCTGAGCGGGAGCTTCCTCACGCTGCTGTC
AGTCTTGGGGAGCAGCATCGCCCACGTCAACCCCACGTTCGTGTTCGACG
AGCTCGTGGTGACCCACTACTGCGGCAGCATCGGCGGCCTGTCCGGGCTG
GTCGTGACGGCCATCACGCAGCAGGCCGTGGCTCAGGGCTACAAGGTGGT
CGGTTCTATGGAGCTGCTGGGCGACCCGCTATCACTCGTCAGCAAGCTGG
GGGATAGTGTTGCCCAGTTCTTCACCAAGACCAAGGCTGAGATGACCGGC
GATGCTGACACCGTGGGGGCGGGGGCCAAGGTGCTGGTCAAGGGGCTTGT
GGGCGGCACGTTTGGTAGCGCCGCGAAGATCACCGGATCTTTGGAAGGCA
TGATCCGTGGTCTGAGTGGTACAGCCATCGCCGAGAACGAGTCCGGGGTT
GAGCGCGGCGGTGATGACGACGACCAGCTGCAGGGGGAAGTCAAAGACTT
AGAGCACGGGGTGAAGCAGGGTGGCAAGGTTTTCTACGAGACGATGAGGG
CTGGGATCACGGGGTTGATAGACCGGCCGGCCGAGGGCGCAAAGGAAGAG
GGCTTCGCGGGGTTCATCGCCGGCATGGCAAAGGGGATCGTGGGTGCTGT
AGCAGCGCCGGTGGCGGGGGCGCTCGGGGCGGTCTCCCGCGTGACAGAGG
GTGTGGACGCCTCGACGAGGCTCTCCGACGAAAAGCGAATGGGGAGGCGT
CGTGCCGCGAGGACGGCGTTCACGTCGGCATCCAGGGGCAGGGCGCTTCC
CGCGCTCACCCCAAGCGACCTCGTCAAGAACGTTCCGAGAAGGTTCGCGA
CGTTTTGGGTCGATAGCGGCCCGGCGTCCACCGCAGCGGCGGTGCAGGCA
ACCGTGACAACGGGAGAGGCACCAGGGACGAGGCGTGGGAGGCAGGATGG
TGGGGTTGGGGGAGGGCGGGAGCGAGCGTGA
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