mRNA_H-canaliculatus_M_contigs7598.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI) HSP 1 Score: 457 bits (1175), Expect = 1.120e-146 Identity = 267/323 (82.66%), Postives = 281/323 (87.00%), Query Frame = 1
Query: 1 STGGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPALTPSDLVKNVPRRFATFWVDSGPASTAAAVQATVTTGEAPGTRRGRQDGGVGGGR 969
+TGGLTVL G FLT+LSVLGSSIAHVNPTFVFDELVVTHYCGS GGL+GLVVTA+TQQAVAQGYKVVGSMELLGDPLSLV KLGDSV QFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENES +ER ++D QLQ EVK LEHGVKQGGKVFYETM+AGITGLIDRPAEGAKEEG AGFIAGMAKG XXXXXXXXXX AVSRVTEGVDASTRLSDEKRMGRRRAARTAF S GRALP LTP+DLVKNVPR+FAT WV +G +T A+ V GE R + G VG GR
Sbjct: 1096 TTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMER--EEDGQLQREVKGLEHGVKQGGKVFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXAVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGTGLEATGVALP--VPEGEEAEERDRKPAGDVGSGR 1414
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE) HSP 1 Score: 436 bits (1122), Expect = 4.310e-136 Identity = 255/325 (78.46%), Postives = 269/325 (82.77%), Query Frame = 1
Query: 1 STGGLTVLSGSFLTLLSVLGS---------------------------SIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPALTPSDLVKNVPRRFATFWVDSGPASTAAAV 894
+TGGLTVL G FLT+LSVLGS SIAHVNPTFVFDELVVTHYCGS GGL+GLVVTA+TQQAVAQGYKVVGSMELLGDPLSLV KLGDSV QFFTKTKAEMTGDADTVGAGAK+LVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENES +ER +DD QLQ EVKDLE GVKQGGK+FYETM+AGITGLIDRPAEGAKEEG AGFIAGMAKG XXXXXXXXXX VSRVTEGVDASTRLSDEKRMGRRRAARTAF S GRALP LTP DLVKN+PR+FAT WV +G +T A+
Sbjct: 2730 TTGGLTVLGGGFLTVLSVLGSRRVPCSLIVIALACRCSWVTILWAETLSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMER--EDDGQLQREVKDLEQGVKQGGKIFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPIDLVKNIPRKFATLWVGTGLEATGVAL 3052
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA) HSP 1 Score: 250 bits (639), Expect = 3.220e-74 Identity = 156/311 (50.16%), Postives = 192/311 (61.74%), Query Frame = 1
Query: 7 GGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYK---------------------------VVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGK--------VFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPALTPSDLVKNV 834
GGL VL GSFL+ + VLG ++A ++PTFVFDEL+VTHY GS L+ + + QQ VAQGYK VVGSMELLGDPL+LV+KL DSV QF T+AE G+ T GAGA++LV G+VGG FGSAAKI GSLE +IRGLSGT +A+ E GGD V+ L+HG ++GG+ V Y++++ GI+GL+DRP EGAKEEG AGF+ GMAKGIV LGAVS+VTEGVDASTR +RMGRRR R SA G L LT + N+
Sbjct: 296 GGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVAD----AEGGGDT------RVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPR----SAQPGCPLAVLTRDMMAANL 592
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA) HSP 1 Score: 189 bits (480), Expect = 2.460e-52 Identity = 116/276 (42.03%), Postives = 162/276 (58.70%), Query Frame = 1
Query: 10 GLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPALTPSDLVKNVP 837
G+ ++ S ++L VLGSS+AH+NPTF F+EL + G L+ + ++ +Q VAQGYKVVGSMELLGDP+SLVS +G V QFF KT A+M G+++T G G K L +G+VGGTFGS AKITG+ + ++ ++G +N E G G+ G + + + GITG++ RP EGA++ G GF+ G+ KG+V GAVS VTE VDA+ + DE+ MGRRR R+ L LT S L +N+P
Sbjct: 251 GVWLMGSSLWSMLVVLGSSLAHINPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYKVVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSAVTGQNERDNWQRPEHVG--------------QGIVIGSERVWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVGAVAAPVAGAFGAVSAVTESVDANLKYWDERPMGRRRNTRSGTG------LLQPLTVSHLNENIP 506
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Ph (domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA) HSP 1 Score: 163 bits (412), Expect = 4.950e-41 Identity = 106/288 (36.81%), Postives = 159/288 (55.21%), Query Frame = 1
Query: 10 GLTVLSGSFLTLLSVLGSSIAHVNP-TFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSL------------------EGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEH---GVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRRAARTAFTSASRGRALPAL 807
GL ++ + LL+ + S+A ++ T VF+EL+ THY GS L +VV ++ QQA+ Q YK++G+M+LLG+PL+L G V +FF +T+AE+ GDAD+ G G + L K ++GG F S +KITG++ EGM LS + E GG D +G +H G+ +GG+VFY+++++G+ + D P +GA EGF+GF+ GM KG+V LG +SRVT D + + + RRRA R A S +ALP L
Sbjct: 3962 GLELIGTGVVQLLADMARSLAQLSGLTLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQSYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASLLEEVVGVREMAAMAEEGMRDELSSSTARAIGHQTEDGGSSADGWRGRAPPPQHLGEGILKGGEVFYKSVKSGVKNIYDLPQQGASREGFSGFLKGMGKGVVGALAAPLIGTLGGISRVT---DTTAYFEKPRILRRRRAVRVALES----QALPLL 4242
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI) HSP 1 Score: 157 bits (397), Expect = 4.720e-39 Identity = 100/240 (41.67%), Postives = 139/240 (57.92%), Query Frame = 1
Query: 43 LLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEH---GVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRR 753
LLS G+ IA+ +PTF FD + HY GS LVV + +Q V Q YKV+G +++LGDPLSL + V F TKT A +G G+K LVKG+VGGT SA+K+T +L+ +R +G AE SG+E K EH G+ QG F T++ GITG++ +P GA++ G AGF+ G+ +G+V LGA S++T G+DA+TRL D++ MGRRR
Sbjct: 2622 LLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTLVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMES-----------TKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDEPMGRRR 2843
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE) HSP 1 Score: 135 bits (341), Expect = 1.150e-31 Identity = 101/237 (42.62%), Postives = 138/237 (58.23%), Query Frame = 1
Query: 43 LLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGIVXXXXXXXXXXLGAVSRVTEGVDASTRLSDEKRMGRRR 753
LLS G+ IA+ +PTF FD + HY GS VV + +Q V Q YKV+G +++LGDPLSL + V F TKT A +G G+K LVKG+VGGT SA+K+T +L+ +R +G AE SG+E + + L G+ QG F T++ GITG++ +P GA++ G AGF+ XXXXXXXXXX S++T G+DA+TRL D+ MGRRR
Sbjct: 1526 LLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTQVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMES--------KKAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGAAGFVKXXXXXXXXXXXXXXXXXXXXXSKITAGIDATTRLLDDDPMGRRR 1747
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2QD77_PHYPN) HSP 1 Score: 112 bits (279), Expect = 1.710e-23 Identity = 73/211 (34.60%), Postives = 109/211 (51.66%), Query Frame = 1
Query: 7 GGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGI 639
GG +V+ G ++ ++GS+++ +PTF F E+V+ + L +V QQ V Q Y++VGS +++G+P+ LV LG V +F TK E+TGDA T G G KVL K +V S AKITGSL+ + S DD+ V+DL + G F + + G TG+ +P EGA + G G + G +GI
Sbjct: 2287 GGHSVIFGFLSQIIGLIGSNLSG-SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVGEFS-----------------DDKPDPSVEDLSN--DNAGIKFAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGI 2477
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGV5_BRELC) HSP 1 Score: 111 bits (277), Expect = 3.110e-23 Identity = 74/211 (35.07%), Postives = 112/211 (53.08%), Query Frame = 1
Query: 7 GGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGI 639
GG +++ G ++ ++GS+++ +PTF F E+V+ + L +V QQ V Q Y+++GS +++G+P+ LV LG V +F TK E+TGDA T G G KVL K +V + S AKITGSL+ + G EN R DDD G + G+K F + + G TG+ +P EGA + G G + G +GI
Sbjct: 2287 GGHSIVFGGLSQIIGLIGSNLSG-SPTFSFSEIVIVRCFTTKQRLQSQLVANYVQQGVLQAYRLIGSADIIGNPIGLVEDLGSGVVEFLKITKGEITGDAQTRGEGVKVLGKTIVKSSASSVAKITGSLDKFV----GEFADEN-----RQNDDD----GSMSTDNAGIK-----FAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGI 2478
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Match: Uncharacterized (protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AC94_PHYSP) HSP 1 Score: 110 bits (276), Expect = 4.210e-23 Identity = 72/211 (34.12%), Postives = 108/211 (51.18%), Query Frame = 1
Query: 7 GGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLVVTAITQQAVAQGYKVVGSMELLGDPLSLVSKLGDSVAQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESGVERGGDDDDQLQGEVKDLEHGVKQGGKVFYETMRAGITGLIDRPAEGAKEEGFAGFIAGMAKGI 639
GG +V+ G ++ ++GS+++ +PTF F E+V+ + L +V QQ V Q Y++VGS +++G+P+ LV LG V +F TK E+TGDA T G G KVL K +V S AKITGSL+ + A++ S GG+D G F + + G TG+ +P EGA + G G + G +GI
Sbjct: 2286 GGHSVIFGFLSQVVGLIGSNLSG-SPTFSFSEIVIVRCFSTKQRLQSQLVANYVQQGVMQAYRLVGSADIIGNPIGLVEDLGSGVVEFLKITKGELTGDAQTRGEGVKVLGKTIVKSGASSVAKITGSLDKFVG-----EFADDSSASASGGNDSSSND-----------NAGLKFAKDLGRGFTGIFTKPVEGAMKGGVTGLVQGTVQGI 2479 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7598.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7598.2.1 >prot_H-canaliculatus_M_contigs7598.2.1 ID=prot_H-canaliculatus_M_contigs7598.2.1|Name=mRNA_H-canaliculatus_M_contigs7598.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=327bp STGGLTVLSGSFLTLLSVLGSSIAHVNPTFVFDELVVTHYCGSIGGLSGLback to top mRNA from alignment at H-canaliculatus_M_contigs7598:1815..4787- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7598.2.1 ID=mRNA_H-canaliculatus_M_contigs7598.2.1|Name=mRNA_H-canaliculatus_M_contigs7598.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2973bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7598:1815..4787- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7598:1815..4787- >mRNA_H-canaliculatus_M_contigs7598.2.1 ID=mRNA_H-canaliculatus_M_contigs7598.2.1|Name=mRNA_H-canaliculatus_M_contigs7598.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=981bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7598:1815..4787- (Hapterophycus canaliculatus Oshoro7m male)back to top |