mRNA_H-canaliculatus_M_contigs7594.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE) HSP 1 Score: 246 bits (629), Expect = 4.190e-71 Identity = 145/298 (48.66%), Postives = 175/298 (58.72%), Query Frame = 1
Query: 7 AGYTYGNWSGASSGESDWAVVKLDADGTEAWRYQAG------------------------------TDGQDQTKGIAMAEDGSVVVVGATRGDWNG-ANGSFDFAAFRLDADGTEVWRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELS-LGDNDFVAIKLNSSDSTEIWRYQDGSSETDMVYASAATEDEGVVLAGFTDGTWSGDNAGGSDFAAVKLDSDGVEVWRY-----QDGTSAHDTVREVAVQADGSIILAGTTDGDWSGLNXXXXXXXXALISLSTDGEENWRWQ 789
AG T G W G + G +D A +KLDA+G E WRYQ G T D +AMA DGSV+ VG T G W+G ANG DFAAFRLD +G E+WRYQ+GTE+ED ++AA M DGD SVVM G T FS S G D V +KLN++ TEIWRYQDG+S D + A ED G+V+AG TDG WSG+NAG DFAAVKL S + Y QDGT+ +D + VA+QADGS+IL G T GDW G N +++LS DGEE WRWQ
Sbjct: 32 AGATEGAWDGTNFGGNDMAAIKLDAEGNELWRYQDGSVVLAGHQNLDFYVTXXXXXXXXXXXXXXXTPEDDIPYWMAMAGDGSVICVGQTYGSWDGDANGDSDFAAFRLDGNGEEIWRYQDGTEEEDLMTAAAMGDGDSSVVMAGQTYVNFSGASNSGSADIVVVKLNATSGTEIWRYQDGTSVYDKLGLIAVAEDNGIVVAGSTDGIWSGENAGLDDFAAVKLSSFSRLIIMYAHVLPQDGTAENDFLDGVAIQADGSVILGGNTVGDWDGANAGERDFI--MVALSADGEELWRWQ 327
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: von (Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI) HSP 1 Score: 202 bits (513), Expect = 5.790e-58 Identity = 115/285 (40.35%), Postives = 160/285 (56.14%), Query Frame = 1
Query: 7 AGYTYGNWSGASSGESDWAVVKLDADGTEAWRYQAGTDGQDQ------------------TKGIAMAEDGS--VVVVGATRGDWNGAN--GSFDFAAFRL-DADGTEVWRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELSLGDN-DFVAIKLNSSDSTEIWRYQDGSSETDMVYASAATEDEGVVLAGFTDGTWSGDNAGGSDFAAVKLDSDGVEVWRYQDGTSAHDTVREVAVQADGSIILAGTTDGDWSGLNXXXXXXXXALISLSTDGEENWRWQ 789
AG T G+W+ + G+ D+ VK DGTE WR QAGT D G + A D S +++ G T+G W+GA G DF A + DG+++W +Q+GTE++D L G +VV+ G T G +++ + G+ DF A+KL + D +EIWR+QDGSS D + + AA ED+ VVLAG+T+G+ GDNAG +D A VKLD+DG +WR+Q GT+ D AV DGSI++AG T G W G ++ L DG E W WQ
Sbjct: 36 AGRTQGDWAETNEGDFDFMAVKFAQDGTEQWRLQAGTPETDTFHDAAAVTSSPSTVANMAATGTSAAGDESTAIILAGFTKGGWDGAASAGGSDFVAVSVASGDGSQLWSWQDGTEEDDVLMGVVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDDTVVLAGYTEGSLGGDNAGETDCAVVKLDADGGVLWRWQGGTAESDVCSAAAVAEDGSIVVAGYTVGSWGGSEANAGEDDLVVVKLDKDGNELWHWQ 320
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: PEGA (domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI) HSP 1 Score: 203 bits (517), Expect = 4.690e-57 Identity = 128/273 (46.89%), Postives = 158/273 (57.88%), Query Frame = 1
Query: 7 AGYTYGNWSGASSGESDW----AVVKLDADGTEAWRYQAGTDGQDQTKGIAMAEDG-SVVVVGATRGDWNGAN-GSFDFAAFRLDADGTEV-WRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELSLGDNDFVAIKLNSSDSTEIWRYQDGSSETDMVYASAATED-EGVVLAGFTDGTWSGDNAGGSDFAAVKLDSDGVEVWRYQDGTSAHDTVREVAVQADGSIILAGT---TDGDWSGLNXXXXXXXXALISLSTDGEE-NWRWQ 789
AG ++G W+G ++ SD A KLDADG W++Q D A A +G SVV G G W G G DF A LDAD E+ W++Q+G+E D + AT+ D SVVM GYT+G FS ++ G NDFVAIKLN +D +E+WR+QDG+ E D + A A T D G VL G T G W GDNAG DFA V LD DG E WR+QDGT+ + + VAVQ DGSI+LAG T GD S + L DGEE WRWQ
Sbjct: 32 AGLSFGLWNGTNADTSDASLRPAATKLDADGNILWKWQ-----HDINAFAAAAGEGRSVVTAGFASGGWEGTGLGFVDFTAVSLDADSGELLWKWQDGSEGFDVIYGATLADEGESVVMAGYTSGNFSGVNAGSNDFVAIKLNFTDGSEVWRWQDGTDEWDQIGAVAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLDVDGNESWRWQDGTTEQEWLVGVAVQDDGSILLAGQQMETTGDES--------VFFTALKLQADGEEVTWRWQ 291
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: Hemolysin-type (calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.360e-54 Identity = 114/267 (42.70%), Postives = 161/267 (60.30%), Query Frame = 1
Query: 7 AGYTYGNWSGAS--SGESDWAVVKLDADGTEAWRYQAGTDGQDQTKGIAMAEDGSVVVVGATRGDWNG--ANGSFDFAAFRLDADGTEVWRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELSLGDNDFVAIKLNSSDSTEIWRYQDGSSETDMVYASAATEDEG-VVLAGFTDGTWSGDNAGGSDFAAVKLDSDGVEVWRYQDGTS-AHDTVREVAVQADGSIILAGTTDGDWSGLNXXXXXXXXALISLSTDGEENWRWQ 789
AG T G+ G + +G D AV KLD+DG W +Q GT G+D A +DG VVV G + G +G + G DF A + D+DGTE WR+QEGTEK++ +S + DG+VV+ G T G + E + G VA+KL+ SD + IWRYQ G +V AA+ +G +V+ G TDG W G+ G +DF +V LD DG E+WR+QDG+ + + VA +DGS++LAGTTDGD++G N A++ L+ +G +W WQ
Sbjct: 36 AGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKT-ADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDF--AVVKLTEEGVLDWTWQ 299
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC7_9PHAE) HSP 1 Score: 184 bits (467), Expect = 4.030e-52 Identity = 103/240 (42.92%), Postives = 148/240 (61.67%), Query Frame = 1
Query: 88 TEAWRYQAGTDGQDQTKGIAMAEDGSVVVVGATRGDWN--GANGSFDFAAFRLDADGTEVWRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELSLGDNDFVAIKLNSSDSTEIWRYQDGSSETDMVY----ASAATEDEGVVLAGFTDGTWSGDNAGGSDFAAVKLDSDGVEVWRYQDGTSAHDTVREVAVQADGSIILAGTTDGDWSGLNXXXXXXXXALISLSTDGEENWRWQ 789
TE WR+Q G + KG+A +G++V VG T GD+ + G FDF A ++ DG +W +Q+GT ED L+ A +V+ DGSVV+ G T G + + G DF A+KL+ S + +W++Q G+S+ +++ A++A+ E VVL G T+G+W+ NAGG DF A KLD+DG E+W +QDGT A DT + VAV DGS+ LAG T+GDW+ N A+ L +G WRWQ
Sbjct: 3 TEDWRWQGGGPANENMKGVAAGGNGTIVAVGRTDGDFFPFASLGGFDFLAVKIGPDGLYLWHWQDGTSDEDNLNDA-VVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDESGAV-LWKWQSGTSDDELLVGITSANSASGSE-VVLVGRTEGSWAASNAGGYDFCAAKLDADGNELWSWQDGTGADDTTKAVAVDGDGSVFLAGYTEGDWNQPNEGETDF--AVTKLEANGTLAWRWQ 237
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF09_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.680e-51 Identity = 109/266 (40.98%), Postives = 143/266 (53.76%), Query Frame = 1
Query: 64 VVKLDADGTEAWRYQAGTDGQDQTKGIAMA--------------------EDGSVVVVGATRGDWNGAN--GSFDFAAFRL-DADGTEVWRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELSLGDN-DFVAIKLNSSDSTEIWRYQDGSSETDMVYASAATEDEGVVLAGFTDGTWSGDNAGGSDFAAVKLDSDGVEVWRYQDGTSAHDTVREVAVQADGSIILAGTTDGDWSGLNXXXXXXXXALISLSTDGEENWRWQ 789
VK DGTE WR QAGT D A A E ++V+ G T+G WNGA G DF A L DG+ +W +Q+GTE++D L G +VV+ G T G +++ + G+ DF A+KL + D +EIWR+QDGSS D + + AA ED+ VVLAG+TDG+ G NAG +D VKLD+DG +WR+Q GT+ D V DGSI+LAG T G W G ++ L DG E W WQ
Sbjct: 2 AVKFAQDGTEQWRLQAGTPETDTFHDAAAASGSPSTVATMAATGTSAAGDESTAIVLAGFTKGGWNGAASAGGSDFVAVSLASGDGSRLWSWQDGTEEDDVLVGLVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDDTVVLAGYTDGSLGGVNAGETDCTVVKLDADGGVLWRWQGGTAESDVCSATVVAEDGSIVLAGYTVGSWDGSEANAGEEDLVVVKLDKDGNELWHWQ 267
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: Hemolysin-type (calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI) HSP 1 Score: 173 bits (438), Expect = 2.960e-47 Identity = 99/247 (40.08%), Postives = 146/247 (59.11%), Query Frame = 1
Query: 61 AVVKLDADGTEAWRYQAGTDGQDQTKGIAMAEDGSVVVVGATRGDWNG--ANGSFDFAAFRLDADGTEVWRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELSLGDNDFVAIKLNSSDSTEIWRYQDG-SSETDMVYASAATEDEGVVLAGFTDGTWSGDNAGGSDFAAVKLDSDGVEVWRYQDGTS-AHDTVREVAVQADGSIILAGTTDGDWSGLNXXXXXXXXALISLSTDGEENWRWQ 789
A KLD+DG W +Q GT +D A +DG VV G G NG + G DF A + D+DGTE WR+Q+GTE ++ ++ + DG+VV+ G T G + E + G VA+KL+ +D + IW+YQ G S++ + SA+ D +V+ G TDG W G+ G +DF V LD DG E+WR+QDG+ + + VA +DGS++LAGTTDG+++G N A++ L+ +G +W WQ
Sbjct: 2 AAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKT-ADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDF--AVVKLTEEGVLDWTWQ 245
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE) HSP 1 Score: 174 bits (440), Expect = 3.160e-46 Identity = 105/267 (39.33%), Postives = 154/267 (57.68%), Query Frame = 1
Query: 7 AGYTYGNWSGAS--SGESDWAVVKLDADGTEAWRYQAGTDGQDQTKGIAMAEDGSVVVVGATRGDWNG--ANGSFDFAAFRLDADGTEVWRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELSLGDNDFVAIKLNSSDSTEIWRYQDGSSETDMVYASAATEDEG-VVLAGFTDGTWSGDNAGGSDFAAVKLDSDGVEVWRYQDGTS-AHDTVREVAVQADGSIILAGTTDGDWSGLNXXXXXXXXALISLSTDGEENWRWQ 789
AG T G+ G + +G +D A KLD+DG W +Q G+ D A +DG VV G G NG + G DF A + D+DGTE WR+Q+GTEK++ + + DG+VV+ G T G + E + G VA+KL+ +D + IW+YQ G +V AA+ +G +V+ G TDG W G+ G +DF +V L+ DG E+WR+QDG+ + + VA +DGS++LAG TDGD++ N AL+ L+ +G +W WQ
Sbjct: 39 AGTTEGSLDGITFNAGGTDMAAGKLDSDGAVLWYWQEGSTEDDTLADAAATDDGGVVFAGFYNGTLNGVPSEGLGDFFAIKFDSDGTEEWRWQDGTEKDEVILTCSKT-ADGNVVLTGMTQGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSYSVVSRGAASRADGSIVIGGSTDGDWDGELTGYADFFSVALNEDGSELWRFQDGSEFSISSAWGVAALSDGSVVLAGVTDGDYAETNAGEQDF--ALVKLTEEGVLDWTWQ 302
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 172 bits (435), Expect = 5.900e-45 Identity = 100/228 (43.86%), Postives = 141/228 (61.84%), Query Frame = 1
Query: 118 DGQDQTKGIAMAEDGSVVVVGATR-GDWNGAN-GSFDFAAFRLDADGTEVWRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELSLGDNDFVAIKLNSSDSTEIWRYQDGSSETDMVYASAATEDEGVVLAGFTDGTWSGDNAGGS-DFAAVKLDSDGVEVWRYQDGTSA-HDTVREVAVQADGSIILAGTTDGDWSGLNXXXXXXXXALISLSTDGEENWRWQ 789
D + G+A ++ GSVV VG G+W + G +DF A+++D DG +W++Q+GT D L A D +GSV+M G T+ FS S+G DFVAIKL+S +T +W +QDG+S +D + A+AAT D VVLAG+T G WSG G DFAAVKLD++G EVWR+Q G ++ + V+VQ DG+++LAG T G + A + L DG+E WRW+
Sbjct: 97 DANCRAYGVAASDSGSVVAVGTINDGEWATPSVGGYDFIAYKVDGDGNLLWKWQDGTIGFDILWAVVSADEEGSVIMAGMTSLDFSGPSVGSLDFVAIKLDSGGTT-LWTWQDGTSSSDEIQAAAATGDGFVVLAGYTFGEWSGGLTGEECDFAAVKLDANGTEVWRWQGGYEVEYNVIYAVSVQEDGTVLLAGRTGGSQVMSDKRVGSSDIATVMLGADGQEIWRWK 323
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Match: Hemolysin-type (calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI) HSP 1 Score: 170 bits (430), Expect = 2.720e-44 Identity = 97/232 (41.81%), Postives = 141/232 (60.78%), Query Frame = 1
Query: 112 GTDGQDQTKGIAMAEDGSVVVVGATRGDWNG--ANGSFDFAAFRLDADGTEVWRYQEGTEKEDYLSAATMVDGDGSVVMGGYTTGGFSELSLGDNDFVAIKLNSSDSTEIWRYQDGSSETDMVY----ASAATEDEGVVLAGFTDGTWSGDNAGGSDFAAVKLDSDGVEVWRYQDGTSAHDTVREVAVQADGSIILAGTTDGDWSGLNXXXXXXXXALISLSTDGEENWRWQ 789
G + KG+A ++G+++ VG T GD+ + G FDF A +L DG W +Q+GT ED L+ A +V+ DGSVV+ G T G +S + G D A+KL+ S + +W++Q G+S+ +++ A++A+ E VVL G T+G+W+ N GG DF A KLD+DG E+W +QDGT A DT + VAV DGS+ LAG T+GDW+ N A+ L +G WRWQ
Sbjct: 189 GGPANENMKGVAAGDNGTIIAVGRTDGDFFPFVSLGGFDFLAVKLGPDGVYSWHWQDGTSDEDNLNDA-VVNSDGSVVLAGSTEGDWSGTNAGLGDLAAVKLDESGAV-LWKWQSGTSDDELLVGITSANSASGSE-VVLVGRTEGSWAASNVGGYDFCAAKLDADGNELWSWQDGTDADDTTKAVAVDGDGSVFLAGYTEGDWNQPNEGETDF--AVTKLDANGTLAWRWQ 415 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7594.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7594.1.1 >prot_H-canaliculatus_M_contigs7594.1.1 ID=prot_H-canaliculatus_M_contigs7594.1.1|Name=mRNA_H-canaliculatus_M_contigs7594.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=269bp MHAGYTYGNWSGASSGESDWAVVKLDADGTEAWRYQAGTDGQDQTKGIAMback to top mRNA from alignment at H-canaliculatus_M_contigs7594:818..5113+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7594.1.1 ID=mRNA_H-canaliculatus_M_contigs7594.1.1|Name=mRNA_H-canaliculatus_M_contigs7594.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4296bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7594:818..5113+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7594:818..5113+ >mRNA_H-canaliculatus_M_contigs7594.1.1 ID=mRNA_H-canaliculatus_M_contigs7594.1.1|Name=mRNA_H-canaliculatus_M_contigs7594.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=807bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7594:818..5113+ (Hapterophycus canaliculatus Oshoro7m male)back to top |